EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000002549 (Gene tree)
Gene ID: 103043855
Gene Symbol: larp7
Alias: fa10g04|wu:fa10g04|zgc:56476
Full Name: La ribonucleoprotein domain family member 7
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 7185 bases
Position: chr16:25805285-25812469
Accession: 103043855
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000002609	RRM_1	PF00076.22	6e-18	1	1
ENSAMXP00000002609	RRM_3	PF08777.11	3.6e-29	1	1
ENSAMXP00000002609	La	PF05383.17	2.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000002609	-	2648	XM_007255197	ENSAMXP00000002609	565 (aa)	XP_007255259	W5K4U8

Gene Model

Click here to download ENSAMXG00000002549's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000002549's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000002549	larp7	95	54.758	ENSG00000174720	LARP7	89	71.304	Homo_sapiens
ENSAMXG00000002549	larp7	98	60.209	ENSAPOG00000014570	larp7	99	59.683	Acanthochromis_polyacanthus
ENSAMXG00000002549	larp7	96	61.931	ENSACIG00000023850	larp7	96	59.489	Amphilophus_citrinellus
ENSAMXG00000002549	larp7	98	60.000	ENSAOCG00000016160	larp7	98	59.364	Amphiprion_ocellaris
ENSAMXG00000002549	larp7	98	60.000	ENSAPEG00000021823	larp7	98	59.364	Amphiprion_percula
ENSAMXG00000002549	larp7	99	61.856	ENSATEG00000016238	larp7	99	59.862	Anabas_testudineus
ENSAMXG00000002549	larp7	100	51.974	ENSAPLG00000012887	LARP7	99	51.071	Anas_platyrhynchos
ENSAMXG00000002549	larp7	97	52.811	ENSACAG00000010662	LARP7	93	53.002	Anolis_carolinensis
ENSAMXG00000002549	larp7	95	52.660	ENSANAG00000031139	-	97	52.189	Aotus_nancymaae
ENSAMXG00000002549	larp7	95	45.238	ENSANAG00000022318	-	97	42.780	Aotus_nancymaae
ENSAMXG00000002549	larp7	100	59.896	ENSACLG00000023184	larp7	99	59.445	Astatotilapia_calliptera
ENSAMXG00000002549	larp7	95	54.450	ENSCAFG00000011715	LARP7	97	53.833	Canis_familiaris
ENSAMXG00000002549	larp7	95	55.185	ENSCAFG00020017225	LARP7	97	54.545	Canis_lupus_dingo
ENSAMXG00000002549	larp7	94	50.376	ENSCHIG00000013971	-	94	47.495	Capra_hircus
ENSAMXG00000002549	larp7	89	53.717	ENSTSYG00000006769	-	97	54.144	Carlito_syrichta
ENSAMXG00000002549	larp7	95	47.436	ENSCAPG00000009328	LARP7	70	57.500	Cavia_aperea
ENSAMXG00000002549	larp7	95	54.011	ENSCCAG00000026787	-	97	53.765	Cebus_capucinus
ENSAMXG00000002549	larp7	94	50.277	ENSCCAG00000023563	-	99	48.352	Cebus_capucinus
ENSAMXG00000002549	larp7	95	55.216	ENSCATG00000043535	LARP7	97	55.185	Cercocebus_atys
ENSAMXG00000002549	larp7	95	55.179	ENSCLAG00000005894	LARP7	99	54.561	Chinchilla_lanigera
ENSAMXG00000002549	larp7	95	55.396	ENSCSAG00000003810	LARP7	97	55.360	Chlorocebus_sabaeus
ENSAMXG00000002549	larp7	92	45.985	ENSCHOG00000008967	-	70	64.881	Choloepus_hoffmanni
ENSAMXG00000002549	larp7	98	53.242	ENSCPBG00000004919	LARP7	99	52.881	Chrysemys_picta_bellii
ENSAMXG00000002549	larp7	95	55.417	ENSCANG00000031482	LARP7	96	55.263	Colobus_angolensis_palliatus
ENSAMXG00000002549	larp7	85	48.723	ENSCGRG00001012747	-	97	49.606	Cricetulus_griseus_chok1gshd
ENSAMXG00000002549	larp7	94	52.910	ENSCGRG00001025050	-	98	54.610	Cricetulus_griseus_chok1gshd
ENSAMXG00000002549	larp7	91	50.926	ENSCGRG00000007642	-	99	50.089	Cricetulus_griseus_crigri
ENSAMXG00000002549	larp7	90	48.987	ENSCGRG00000001141	-	98	50.741	Cricetulus_griseus_crigri
ENSAMXG00000002549	larp7	99	56.822	ENSCSEG00000009088	larp7	99	56.446	Cynoglossus_semilaevis
ENSAMXG00000002549	larp7	99	57.766	ENSCVAG00000016852	larp7	88	68.966	Cyprinodon_variegatus
ENSAMXG00000002549	larp7	99	62.787	ENSDARG00000017315	larp7	98	62.610	Danio_rerio
ENSAMXG00000002549	larp7	95	52.548	ENSDNOG00000013761	LARP7	97	54.983	Dasypus_novemcinctus
ENSAMXG00000002549	larp7	95	54.270	ENSETEG00000011692	LARP7	97	53.886	Echinops_telfairi
ENSAMXG00000002549	larp7	95	54.895	ENSEASG00005005592	LARP7	97	54.811	Equus_asinus_asinus
ENSAMXG00000002549	larp7	95	54.895	ENSECAG00000000834	LARP7	97	54.811	Equus_caballus
ENSAMXG00000002549	larp7	95	60.073	ENSELUG00000015341	larp7	99	58.031	Esox_lucius
ENSAMXG00000002549	larp7	100	52.138	ENSFALG00000000972	LARP7	98	51.741	Ficedula_albicollis
ENSAMXG00000002549	larp7	95	55.773	ENSFDAG00000014048	-	99	54.762	Fukomys_damarensis
ENSAMXG00000002549	larp7	95	49.737	ENSFDAG00000011855	-	99	49.652	Fukomys_damarensis
ENSAMXG00000002549	larp7	99	58.627	ENSFHEG00000021652	larp7	99	57.876	Fundulus_heteroclitus
ENSAMXG00000002549	larp7	97	53.925	ENSGALG00000012048	LARP7	97	52.981	Gallus_gallus
ENSAMXG00000002549	larp7	98	58.554	ENSGAFG00000015400	larp7	99	57.549	Gambusia_affinis
ENSAMXG00000002549	larp7	97	57.570	ENSGACG00000019618	larp7	86	70.256	Gasterosteus_aculeatus
ENSAMXG00000002549	larp7	100	52.658	ENSGAGG00000024520	LARP7	99	52.483	Gopherus_agassizii
ENSAMXG00000002549	larp7	84	53.753	ENSGGOG00000006438	-	94	53.753	Gorilla_gorilla
ENSAMXG00000002549	larp7	95	55.117	ENSGGOG00000023567	-	97	55.263	Gorilla_gorilla
ENSAMXG00000002549	larp7	100	60.590	ENSHBUG00000019223	larp7	99	59.272	Haplochromis_burtoni
ENSAMXG00000002549	larp7	96	58.672	ENSHCOG00000000664	LARP7	97	56.985	Hippocampus_comes
ENSAMXG00000002549	larp7	100	72.680	ENSIPUG00000019886	larp7	100	72.680	Ictalurus_punctatus
ENSAMXG00000002549	larp7	95	53.927	ENSSTOG00000011789	LARP7	98	55.026	Ictidomys_tridecemlineatus
ENSAMXG00000002549	larp7	95	53.521	ENSJJAG00000000257	-	98	53.886	Jaculus_jaculus
ENSAMXG00000002549	larp7	100	58.421	ENSKMAG00000005057	larp7	99	57.565	Kryptolebias_marmoratus
ENSAMXG00000002549	larp7	97	57.217	ENSLBEG00000020062	larp7	97	57.443	Labrus_bergylta
ENSAMXG00000002549	larp7	97	52.087	ENSLACG00000013744	LARP7	97	49.331	Latimeria_chalumnae
ENSAMXG00000002549	larp7	99	49.839	ENSLOCG00000011608	larp7	99	51.882	Lepisosteus_oculatus
ENSAMXG00000002549	larp7	95	55.476	ENSMFAG00000036506	LARP7	59	72.388	Macaca_fascicularis
ENSAMXG00000002549	larp7	95	55.396	ENSMNEG00000034758	LARP7	97	55.360	Macaca_nemestrina
ENSAMXG00000002549	larp7	95	55.396	ENSMLEG00000026154	LARP7	97	55.360	Mandrillus_leucophaeus
ENSAMXG00000002549	larp7	100	60.580	ENSMAMG00000005835	larp7	99	59.380	Mastacembelus_armatus
ENSAMXG00000002549	larp7	100	59.896	ENSMZEG00005002084	larp7	99	59.445	Maylandia_zebra
ENSAMXG00000002549	larp7	97	54.152	ENSMGAG00000010947	LARP7	97	53.033	Meleagris_gallopavo
ENSAMXG00000002549	larp7	94	44.920	ENSMAUG00000005625	-	99	46.018	Mesocricetus_auratus
ENSAMXG00000002549	larp7	95	54.878	ENSMICG00000031035	LARP7	97	55.766	Microcebus_murinus
ENSAMXG00000002549	larp7	88	51.569	ENSMOCG00000015761	-	100	51.765	Microtus_ochrogaster
ENSAMXG00000002549	larp7	94	54.545	ENSMOCG00000012519	-	99	54.482	Microtus_ochrogaster
ENSAMXG00000002549	larp7	94	50.980	MGP_CAROLIEiJ_G0025613	-	83	74.725	Mus_caroli
ENSAMXG00000002549	larp7	94	52.688	ENSMUSG00000027968	Larp7	84	77.612	Mus_musculus
ENSAMXG00000002549	larp7	94	52.679	MGP_PahariEiJ_G0027060	-	99	52.586	Mus_pahari
ENSAMXG00000002549	larp7	94	51.670	MGP_SPRETEiJ_G0026566	Larp7	83	73.626	Mus_spretus
ENSAMXG00000002549	larp7	95	54.787	ENSMPUG00000008331	-	97	54.325	Mustela_putorius_furo
ENSAMXG00000002549	larp7	85	52.140	ENSMLUG00000027214	LARP7	99	50.000	Myotis_lucifugus
ENSAMXG00000002549	larp7	95	55.396	ENSNLEG00000016354	LARP7	96	55.654	Nomascus_leucogenys
ENSAMXG00000002549	larp7	85	64.885	ENSOPRG00000009594	-	57	64.885	Ochotona_princeps
ENSAMXG00000002549	larp7	95	60.512	ENSONIG00000008763	larp7	97	59.892	Oreochromis_niloticus
ENSAMXG00000002549	larp7	97	53.209	ENSOANG00000009298	LARP7	97	53.299	Ornithorhynchus_anatinus
ENSAMXG00000002549	larp7	95	58.899	ENSORLG00000004978	larp7	99	57.118	Oryzias_latipes
ENSAMXG00000002549	larp7	95	59.083	ENSORLG00020013825	larp7	99	57.193	Oryzias_latipes_hni
ENSAMXG00000002549	larp7	97	58.467	ENSOMEG00000006920	larp7	98	58.007	Oryzias_melastigma
ENSAMXG00000002549	larp7	95	55.221	ENSOGAG00000001643	LARP7	97	55.594	Otolemur_garnettii
ENSAMXG00000002549	larp7	95	54.856	ENSPPAG00000038420	LARP7	96	55.304	Pan_paniscus
ENSAMXG00000002549	larp7	95	55.117	ENSPTRG00000016380	LARP7	98	55.052	Pan_troglodytes
ENSAMXG00000002549	larp7	95	55.296	ENSPANG00000006701	LARP7	96	55.263	Papio_anubis
ENSAMXG00000002549	larp7	100	62.823	ENSPKIG00000023484	larp7	99	61.790	Paramormyrops_kingsleyae
ENSAMXG00000002549	larp7	99	54.118	ENSPSIG00000014419	LARP7	99	53.535	Pelodiscus_sinensis
ENSAMXG00000002549	larp7	94	52.705	ENSPEMG00000013978	-	98	53.310	Peromyscus_maniculatus_bairdii
ENSAMXG00000002549	larp7	95	52.513	ENSPCIG00000020284	LARP7	96	61.739	Phascolarctos_cinereus
ENSAMXG00000002549	larp7	98	58.803	ENSPFOG00000000265	larp7	99	57.624	Poecilia_formosa
ENSAMXG00000002549	larp7	98	58.627	ENSPLAG00000012181	larp7	99	57.447	Poecilia_latipinna
ENSAMXG00000002549	larp7	98	58.627	ENSPMEG00000007182	larp7	99	57.447	Poecilia_mexicana
ENSAMXG00000002549	larp7	98	58.979	ENSPREG00000019513	larp7	98	57.041	Poecilia_reticulata
ENSAMXG00000002549	larp7	95	55.117	ENSPPYG00000015010	LARP7	97	55.263	Pongo_abelii
ENSAMXG00000002549	larp7	99	53.559	ENSPVAG00000000282	LARP7	99	53.299	Pteropus_vampyrus
ENSAMXG00000002549	larp7	100	80.702	ENSPNAG00000017554	larp7	100	80.702	Pygocentrus_nattereri
ENSAMXG00000002549	larp7	94	51.792	ENSRNOG00000048989	Larp7	99	52.487	Rattus_norvegicus
ENSAMXG00000002549	larp7	76	52.308	ENSRBIG00000031916	LARP7	96	52.278	Rhinopithecus_bieti
ENSAMXG00000002549	larp7	95	55.417	ENSRROG00000033414	LARP7	97	55.360	Rhinopithecus_roxellana
ENSAMXG00000002549	larp7	95	54.594	ENSSBOG00000030886	-	99	53.925	Saimiri_boliviensis_boliviensis
ENSAMXG00000002549	larp7	95	43.462	ENSSBOG00000022652	-	98	43.423	Saimiri_boliviensis_boliviensis
ENSAMXG00000002549	larp7	95	51.986	ENSSHAG00000008153	LARP7	97	51.864	Sarcophilus_harrisii
ENSAMXG00000002549	larp7	100	61.897	ENSSFOG00015019344	larp7	99	62.284	Scleropages_formosus
ENSAMXG00000002549	larp7	99	60.243	ENSSMAG00000011296	larp7	99	59.511	Scophthalmus_maximus
ENSAMXG00000002549	larp7	99	60.348	ENSSDUG00000007045	larp7	99	59.123	Seriola_dumerili
ENSAMXG00000002549	larp7	50	44.257	ENSSARG00000000190	-	96	42.475	Sorex_araneus
ENSAMXG00000002549	larp7	98	59.615	ENSSPAG00000016066	larp7	98	58.377	Stegastes_partitus
ENSAMXG00000002549	larp7	95	52.890	ENSSSCG00000009119	LARP7	97	53.504	Sus_scrofa
ENSAMXG00000002549	larp7	97	53.713	ENSTGUG00000001804	LARP7	97	53.779	Taeniopygia_guttata
ENSAMXG00000002549	larp7	98	57.014	ENSTRUG00000004996	larp7	99	56.295	Takifugu_rubripes
ENSAMXG00000002549	larp7	95	52.450	ENSTNIG00000007183	larp7	98	51.596	Tetraodon_nigroviridis
ENSAMXG00000002549	larp7	95	53.405	ENSTBEG00000009188	LARP7	96	52.768	Tupaia_belangeri
ENSAMXG00000002549	larp7	88	51.776	ENSTTRG00000005233	LARP7	99	51.601	Tursiops_truncatus
ENSAMXG00000002549	larp7	95	54.930	ENSUAMG00000000836	LARP7	97	54.296	Ursus_americanus
ENSAMXG00000002549	larp7	95	54.401	ENSUMAG00000002263	LARP7	97	53.780	Ursus_maritimus
ENSAMXG00000002549	larp7	95	53.833	ENSVPAG00000010502	LARP7	97	54.371	Vicugna_pacos
ENSAMXG00000002549	larp7	95	55.009	ENSVVUG00000002274	LARP7	97	54.374	Vulpes_vulpes
ENSAMXG00000002549	larp7	98	58.036	ENSXCOG00000004883	larp7	94	69.118	Xiphophorus_couchianus
ENSAMXG00000002549	larp7	98	58.730	ENSXMAG00000008479	larp7	99	57.371	Xiphophorus_maculatus