EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000002724 (Gene tree)
Gene ID: 103038298
Gene Symbol: -
Alias: -
Full Name: ataxin-1-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 13063 bases
Position: chrAPWO02000056.1:899387-912449
Accession: 103038298
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000002788	AXH	PF08517.12	7.7e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000002788	-	5211	XM_007236078	ENSAMXP00000002788	603 (aa)	XP_007236140	W5K5C7

Gene Model

Click here to download ENSAMXG00000002724's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000002724's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000002724	-	100	45.429	ENSAPOG00000010154	-	100	44.602	Acanthochromis_polyacanthus
ENSAMXG00000002724	-	100	45.546	ENSAOCG00000006788	-	100	44.602	Amphiprion_ocellaris
ENSAMXG00000002724	-	100	45.690	ENSAPEG00000013961	-	100	44.744	Amphiprion_percula
ENSAMXG00000002724	-	100	44.993	ENSATEG00000015767	-	100	44.130	Anabas_testudineus
ENSAMXG00000002724	-	100	44.186	ENSCSEG00000020655	-	100	44.813	Cynoglossus_semilaevis
ENSAMXG00000002724	-	100	45.029	ENSCVAG00000012483	-	100	43.290	Cyprinodon_variegatus
ENSAMXG00000002724	-	100	45.401	ENSFHEG00000003223	-	100	43.972	Fundulus_heteroclitus
ENSAMXG00000002724	-	100	42.898	ENSGAFG00000013774	-	100	39.722	Gambusia_affinis
ENSAMXG00000002724	-	100	42.651	ENSHBUG00000007567	-	100	42.611	Haplochromis_burtoni
ENSAMXG00000002724	-	100	44.709	ENSHCOG00000000585	-	100	44.760	Hippocampus_comes
ENSAMXG00000002724	-	100	62.424	ENSIPUG00000014628	-	90	70.906	Ictalurus_punctatus
ENSAMXG00000002724	-	100	43.867	ENSKMAG00000013261	-	100	43.804	Kryptolebias_marmoratus
ENSAMXG00000002724	-	74	43.646	ENSLBEG00000007715	-	100	42.329	Labrus_bergylta
ENSAMXG00000002724	-	99	38.288	ENSLOCG00000003546	-	89	50.000	Lepisosteus_oculatus
ENSAMXG00000002724	-	96	56.388	ENSMAMG00000024117	-	100	41.259	Mastacembelus_armatus
ENSAMXG00000002724	-	100	42.651	ENSMZEG00005025990	-	100	42.611	Maylandia_zebra
ENSAMXG00000002724	-	100	44.915	ENSMALG00000022211	-	100	42.697	Monopterus_albus
ENSAMXG00000002724	-	100	43.429	ENSORLG00000025783	-	100	41.750	Oryzias_latipes
ENSAMXG00000002724	-	100	42.225	ENSORLG00020018594	-	100	40.831	Oryzias_latipes_hni
ENSAMXG00000002724	-	97	42.982	ENSORLG00015013642	-	100	41.583	Oryzias_latipes_hsok
ENSAMXG00000002724	-	100	44.365	ENSOMEG00000007446	-	96	42.324	Oryzias_melastigma
ENSAMXG00000002724	-	84	41.404	ENSPKIG00000025441	-	85	39.895	Paramormyrops_kingsleyae
ENSAMXG00000002724	-	100	43.497	ENSPFOG00000009556	-	100	41.044	Poecilia_formosa
ENSAMXG00000002724	-	69	44.106	ENSPLAG00000020125	-	99	40.551	Poecilia_latipinna
ENSAMXG00000002724	-	100	43.786	ENSPMEG00000023122	-	100	41.036	Poecilia_mexicana
ENSAMXG00000002724	-	100	43.786	ENSPREG00000007919	-	100	40.559	Poecilia_reticulata
ENSAMXG00000002724	-	100	85.149	ENSPNAG00000001615	-	100	84.818	Pygocentrus_nattereri
ENSAMXG00000002724	-	99	40.668	ENSSFOG00015020613	-	99	40.092	Scleropages_formosus
ENSAMXG00000002724	-	87	47.961	ENSSDUG00000022785	-	94	47.359	Seriola_dumerili
ENSAMXG00000002724	-	100	45.559	ENSSLDG00000012498	-	100	46.000	Seriola_lalandi_dorsalis
ENSAMXG00000002724	-	100	44.886	ENSSPAG00000018983	-	100	44.350	Stegastes_partitus
ENSAMXG00000002724	-	100	43.977	ENSXMAG00000028965	-	100	43.415	Xiphophorus_maculatus