EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000002872 (Gene tree)
Gene ID: 103022211
Gene Symbol: SUGP1
Alias: -
Full Name: SURP and G-patch domain containing 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 16173 bases
Position: chr17:10605433-10621605
Accession: 103022211
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000002936	Surp	PF01805.20	6.6e-30	1	2
ENSAMXP00000002936	Surp	PF01805.20	6.6e-30	2	2
ENSAMXP00000033317	Surp	PF01805.20	6.6e-30	1	2
ENSAMXP00000033317	Surp	PF01805.20	6.6e-30	2	2
ENSAMXP00000044411	Surp	PF01805.20	7.8e-14	1	1
ENSAMXP00000053928	Surp	PF01805.20	1e-13	1	1
ENSAMXP00000002936	G-patch	PF01585.23	1.4e-14	1	1
ENSAMXP00000033317	G-patch	PF01585.23	1.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000057382	SUGP1-204	756	-	ENSAMXP00000044411	251 (aa)	-	-
ENSAMXT00000048262	SUGP1-202	2970	XM_022678909	ENSAMXP00000033317	631 (aa)	XP_022534630	UPI000BBD722F
ENSAMXT00000002936	SUGP1-201	1872	-	ENSAMXP00000002936	623 (aa)	-	W5K5S5
ENSAMXT00000029961	SUGP1-203	861	-	ENSAMXP00000053928	286 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000002872's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000002872's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000002872	SUGP1	98	60.821	ENSG00000105705	SUGP1	96	61.551	Homo_sapiens
ENSAMXG00000002872	SUGP1	100	68.934	ENSAPOG00000004189	SUGP1	100	69.984	Acanthochromis_polyacanthus
ENSAMXG00000002872	SUGP1	98	60.000	ENSAMEG00000011838	SUGP1	96	59.843	Ailuropoda_melanoleuca
ENSAMXG00000002872	SUGP1	98	69.793	ENSACIG00000018294	SUGP1	97	69.793	Amphilophus_citrinellus
ENSAMXG00000002872	SUGP1	100	70.047	ENSAOCG00000016128	SUGP1	100	70.047	Amphiprion_ocellaris
ENSAMXG00000002872	SUGP1	100	70.203	ENSAPEG00000012114	SUGP1	100	70.203	Amphiprion_percula
ENSAMXG00000002872	SUGP1	100	69.579	ENSATEG00000015089	SUGP1	100	68.955	Anabas_testudineus
ENSAMXG00000002872	SUGP1	97	61.576	ENSAPLG00000002500	SUGP1	95	62.158	Anas_platyrhynchos
ENSAMXG00000002872	SUGP1	58	64.305	ENSACAG00000008769	SUGP1	91	65.753	Anolis_carolinensis
ENSAMXG00000002872	SUGP1	98	60.979	ENSANAG00000028538	SUGP1	96	61.076	Aotus_nancymaae
ENSAMXG00000002872	SUGP1	98	70.541	ENSACLG00000002221	SUGP1	100	69.051	Astatotilapia_calliptera
ENSAMXG00000002872	SUGP1	98	59.746	ENSBTAG00000006116	SUGP1	96	59.810	Bos_taurus
ENSAMXG00000002872	SUGP1	98	61.672	ENSCJAG00000005755	SUGP1	96	61.611	Callithrix_jacchus
ENSAMXG00000002872	SUGP1	98	59.810	ENSCAFG00000014314	SUGP1	96	60.283	Canis_familiaris
ENSAMXG00000002872	SUGP1	98	59.810	ENSCAFG00020012508	SUGP1	96	60.283	Canis_lupus_dingo
ENSAMXG00000002872	SUGP1	98	59.588	ENSCHIG00000024169	SUGP1	96	59.652	Capra_hircus
ENSAMXG00000002872	SUGP1	98	60.903	ENSTSYG00000005329	SUGP1	96	61.356	Carlito_syrichta
ENSAMXG00000002872	SUGP1	98	59.561	ENSCAPG00000010672	SUGP1	98	60.597	Cavia_aperea
ENSAMXG00000002872	SUGP1	98	59.561	ENSCPOG00000007797	SUGP1	96	60.597	Cavia_porcellus
ENSAMXG00000002872	SUGP1	98	60.190	ENSCCAG00000024177	SUGP1	97	60.856	Cebus_capucinus
ENSAMXG00000002872	SUGP1	98	60.535	ENSCATG00000033059	SUGP1	96	61.041	Cercocebus_atys
ENSAMXG00000002872	SUGP1	98	47.930	ENSCATG00000033580	-	98	47.840	Cercocebus_atys
ENSAMXG00000002872	SUGP1	98	60.472	ENSCLAG00000003512	SUGP1	96	61.102	Chinchilla_lanigera
ENSAMXG00000002872	SUGP1	98	54.077	ENSCSAG00000005148	SUGP1	97	65.263	Chlorocebus_sabaeus
ENSAMXG00000002872	SUGP1	98	62.600	ENSCPBG00000012455	SUGP1	96	62.802	Chrysemys_picta_bellii
ENSAMXG00000002872	SUGP1	98	61.137	ENSCANG00000035428	SUGP1	96	61.551	Colobus_angolensis_palliatus
ENSAMXG00000002872	SUGP1	98	61.295	ENSCGRG00001021250	Sugp1	99	61.295	Cricetulus_griseus_chok1gshd
ENSAMXG00000002872	SUGP1	98	61.295	ENSCGRG00000014265	Sugp1	98	61.295	Cricetulus_griseus_crigri
ENSAMXG00000002872	SUGP1	100	70.189	ENSCSEG00000014421	SUGP1	100	69.085	Cynoglossus_semilaevis
ENSAMXG00000002872	SUGP1	100	66.875	ENSCVAG00000004765	SUGP1	100	66.406	Cyprinodon_variegatus
ENSAMXG00000002872	SUGP1	99	56.716	ENSDARG00000075936	sugp1	97	55.762	Danio_rerio
ENSAMXG00000002872	SUGP1	80	54.286	ENSEBUG00000016994	SUGP1	90	54.255	Eptatretus_burgeri
ENSAMXG00000002872	SUGP1	98	59.874	ENSEASG00005006593	SUGP1	93	60.032	Equus_asinus_asinus
ENSAMXG00000002872	SUGP1	98	59.874	ENSECAG00000013871	SUGP1	96	60.032	Equus_caballus
ENSAMXG00000002872	SUGP1	100	68.326	ENSELUG00000001358	SUGP1	100	68.882	Esox_lucius
ENSAMXG00000002872	SUGP1	98	59.968	ENSFCAG00000009779	SUGP1	96	60.374	Felis_catus
ENSAMXG00000002872	SUGP1	74	63.674	ENSFALG00000010583	-	100	63.958	Ficedula_albicollis
ENSAMXG00000002872	SUGP1	98	59.754	ENSFDAG00000014261	SUGP1	96	60.648	Fukomys_damarensis
ENSAMXG00000002872	SUGP1	100	64.688	ENSFHEG00000002556	SUGP1	100	64.688	Fundulus_heteroclitus
ENSAMXG00000002872	SUGP1	99	68.571	ENSGMOG00000012159	SUGP1	99	68.780	Gadus_morhua
ENSAMXG00000002872	SUGP1	92	81.919	ENSGALG00000042132	SUGP1	95	62.400	Gallus_gallus
ENSAMXG00000002872	SUGP1	100	67.083	ENSGAFG00000008550	SUGP1	100	66.927	Gambusia_affinis
ENSAMXG00000002872	SUGP1	99	69.255	ENSGACG00000015222	SUGP1	98	68.463	Gasterosteus_aculeatus
ENSAMXG00000002872	SUGP1	98	63.023	ENSGAGG00000022764	SUGP1	96	63.047	Gopherus_agassizii
ENSAMXG00000002872	SUGP1	98	60.876	ENSGGOG00000002984	SUGP1	96	61.331	Gorilla_gorilla
ENSAMXG00000002872	SUGP1	98	70.382	ENSHBUG00000022000	SUGP1	100	68.896	Haplochromis_burtoni
ENSAMXG00000002872	SUGP1	98	61.792	ENSHGLG00000004593	SUGP1	96	61.635	Heterocephalus_glaber_female
ENSAMXG00000002872	SUGP1	98	61.635	ENSHGLG00100006097	SUGP1	96	61.478	Heterocephalus_glaber_male
ENSAMXG00000002872	SUGP1	99	61.920	ENSHCOG00000001195	SUGP1	96	68.762	Hippocampus_comes
ENSAMXG00000002872	SUGP1	100	78.165	ENSIPUG00000006883	sugp1	100	78.165	Ictalurus_punctatus
ENSAMXG00000002872	SUGP1	98	60.410	ENSSTOG00000001020	SUGP1	96	61.164	Ictidomys_tridecemlineatus
ENSAMXG00000002872	SUGP1	98	60.285	ENSJJAG00000013477	Sugp1	96	60.285	Jaculus_jaculus
ENSAMXG00000002872	SUGP1	100	65.888	ENSKMAG00000006042	SUGP1	100	65.732	Kryptolebias_marmoratus
ENSAMXG00000002872	SUGP1	100	67.083	ENSLBEG00000000335	SUGP1	100	66.822	Labrus_bergylta
ENSAMXG00000002872	SUGP1	100	62.362	ENSLACG00000011311	SUGP1	100	62.205	Latimeria_chalumnae
ENSAMXG00000002872	SUGP1	91	68.537	ENSLOCG00000005094	SUGP1	99	70.957	Lepisosteus_oculatus
ENSAMXG00000002872	SUGP1	98	60.127	ENSLAFG00000017363	SUGP1	99	60.855	Loxodonta_africana
ENSAMXG00000002872	SUGP1	98	60.664	ENSMFAG00000031157	SUGP1	96	61.417	Macaca_fascicularis
ENSAMXG00000002872	SUGP1	97	60.925	ENSMMUG00000028834	SUGP1	99	61.367	Macaca_mulatta
ENSAMXG00000002872	SUGP1	98	46.730	ENSMNEG00000035574	-	97	48.065	Macaca_nemestrina
ENSAMXG00000002872	SUGP1	98	60.664	ENSMNEG00000042010	SUGP1	96	61.199	Macaca_nemestrina
ENSAMXG00000002872	SUGP1	98	62.857	ENSMLEG00000043364	SUGP1	95	63.228	Mandrillus_leucophaeus
ENSAMXG00000002872	SUGP1	100	69.029	ENSMAMG00000010022	SUGP1	100	68.413	Mastacembelus_armatus
ENSAMXG00000002872	SUGP1	98	70.400	ENSMZEG00005025588	SUGP1	100	69.051	Maylandia_zebra
ENSAMXG00000002872	SUGP1	97	61.376	ENSMAUG00000016683	Sugp1	92	61.008	Mesocricetus_auratus
ENSAMXG00000002872	SUGP1	98	60.754	ENSMOCG00000014670	Sugp1	96	60.597	Microtus_ochrogaster
ENSAMXG00000002872	SUGP1	98	68.071	ENSMMOG00000010675	SUGP1	97	68.071	Mola_mola
ENSAMXG00000002872	SUGP1	98	61.965	ENSMODG00000007089	SUGP1	96	62.360	Monodelphis_domestica
ENSAMXG00000002872	SUGP1	100	67.807	ENSMALG00000020217	SUGP1	100	66.252	Monopterus_albus
ENSAMXG00000002872	SUGP1	98	60.568	MGP_CAROLIEiJ_G0031126	Sugp1	96	60.476	Mus_caroli
ENSAMXG00000002872	SUGP1	98	60.127	ENSMUSG00000011306	Sugp1	96	60.000	Mus_musculus
ENSAMXG00000002872	SUGP1	98	59.937	MGP_PahariEiJ_G0021591	Sugp1	96	60.000	Mus_pahari
ENSAMXG00000002872	SUGP1	98	60.285	MGP_SPRETEiJ_G0032244	Sugp1	96	60.159	Mus_spretus
ENSAMXG00000002872	SUGP1	98	60.285	ENSMPUG00000015404	SUGP1	96	60.635	Mustela_putorius_furo
ENSAMXG00000002872	SUGP1	98	60.095	ENSMLUG00000017360	SUGP1	96	60.032	Myotis_lucifugus
ENSAMXG00000002872	SUGP1	90	61.207	ENSNGAG00000018965	Sugp1	98	62.003	Nannospalax_galili
ENSAMXG00000002872	SUGP1	94	62.195	ENSNBRG00000019759	sugp1	79	60.816	Neolamprologus_brichardi
ENSAMXG00000002872	SUGP1	98	56.962	ENSNLEG00000006236	SUGP1	96	57.143	Nomascus_leucogenys
ENSAMXG00000002872	SUGP1	85	67.826	ENSMEUG00000013320	SUGP1	78	67.826	Notamacropus_eugenii
ENSAMXG00000002872	SUGP1	97	57.742	ENSOPRG00000004247	SUGP1	95	57.920	Ochotona_princeps
ENSAMXG00000002872	SUGP1	98	60.821	ENSODEG00000011538	SUGP1	96	61.453	Octodon_degus
ENSAMXG00000002872	SUGP1	100	69.720	ENSONIG00000010178	SUGP1	100	68.896	Oreochromis_niloticus
ENSAMXG00000002872	SUGP1	100	67.551	ENSORLG00000015411	SUGP1	100	67.863	Oryzias_latipes
ENSAMXG00000002872	SUGP1	100	67.395	ENSORLG00020017049	SUGP1	100	67.707	Oryzias_latipes_hni
ENSAMXG00000002872	SUGP1	100	67.083	ENSORLG00015016798	SUGP1	100	67.395	Oryzias_latipes_hsok
ENSAMXG00000002872	SUGP1	100	67.136	ENSOMEG00000021298	SUGP1	100	67.500	Oryzias_melastigma
ENSAMXG00000002872	SUGP1	98	61.417	ENSOGAG00000009975	-	96	61.538	Otolemur_garnettii
ENSAMXG00000002872	SUGP1	98	56.962	ENSOARG00000008152	SUGP1	96	56.646	Ovis_aries
ENSAMXG00000002872	SUGP1	98	60.821	ENSPPAG00000037102	SUGP1	96	61.551	Pan_paniscus
ENSAMXG00000002872	SUGP1	98	59.968	ENSPPRG00000000880	SUGP1	96	60.374	Panthera_pardus
ENSAMXG00000002872	SUGP1	98	60.285	ENSPTIG00000013061	SUGP1	96	60.601	Panthera_tigris_altaica
ENSAMXG00000002872	SUGP1	98	60.821	ENSPTRG00000010737	SUGP1	96	61.551	Pan_troglodytes
ENSAMXG00000002872	SUGP1	98	48.950	ENSPANG00000008180	-	98	48.950	Papio_anubis
ENSAMXG00000002872	SUGP1	98	60.664	ENSPANG00000014398	SUGP1	96	61.331	Papio_anubis
ENSAMXG00000002872	SUGP1	100	70.359	ENSPKIG00000010747	SUGP1	100	70.359	Paramormyrops_kingsleyae
ENSAMXG00000002872	SUGP1	98	63.871	ENSPSIG00000016889	SUGP1	99	63.948	Pelodiscus_sinensis
ENSAMXG00000002872	SUGP1	98	68.233	ENSPMGG00000017278	SUGP1	96	68.233	Periophthalmus_magnuspinnatus
ENSAMXG00000002872	SUGP1	98	60.410	ENSPEMG00000009253	Sugp1	96	60.410	Peromyscus_maniculatus_bairdii
ENSAMXG00000002872	SUGP1	97	50.000	ENSPMAG00000009332	SUGP1	99	49.842	Petromyzon_marinus
ENSAMXG00000002872	SUGP1	100	67.083	ENSPFOG00000015785	SUGP1	100	67.083	Poecilia_formosa
ENSAMXG00000002872	SUGP1	100	67.239	ENSPLAG00000010995	SUGP1	100	67.083	Poecilia_latipinna
ENSAMXG00000002872	SUGP1	100	67.551	ENSPMEG00000000020	SUGP1	100	67.395	Poecilia_mexicana
ENSAMXG00000002872	SUGP1	99	66.667	ENSPREG00000017966	SUGP1	98	66.509	Poecilia_reticulata
ENSAMXG00000002872	SUGP1	98	57.994	ENSPPYG00000009766	SUGP1	96	58.824	Pongo_abelii
ENSAMXG00000002872	SUGP1	55	90.299	ENSPCAG00000014760	SUGP1	54	90.299	Procavia_capensis
ENSAMXG00000002872	SUGP1	98	60.787	ENSPCOG00000017524	SUGP1	96	61.164	Propithecus_coquereli
ENSAMXG00000002872	SUGP1	98	60.350	ENSPVAG00000017451	SUGP1	96	60.256	Pteropus_vampyrus
ENSAMXG00000002872	SUGP1	86	64.444	ENSPNYG00000007066	-	79	60.656	Pundamilia_nyererei
ENSAMXG00000002872	SUGP1	100	85.174	ENSPNAG00000004723	SUGP1	100	85.016	Pygocentrus_nattereri
ENSAMXG00000002872	SUGP1	98	60.883	ENSRNOG00000052111	Sugp1	96	60.883	Rattus_norvegicus
ENSAMXG00000002872	SUGP1	97	49.264	ENSRBIG00000037600	-	94	48.684	Rhinopithecus_bieti
ENSAMXG00000002872	SUGP1	98	55.016	ENSRBIG00000035555	SUGP1	96	55.503	Rhinopithecus_bieti
ENSAMXG00000002872	SUGP1	98	61.137	ENSRROG00000030048	SUGP1	99	61.722	Rhinopithecus_roxellana
ENSAMXG00000002872	SUGP1	98	48.957	ENSRROG00000031017	-	97	49.201	Rhinopithecus_roxellana
ENSAMXG00000002872	SUGP1	98	60.348	ENSSBOG00000020160	SUGP1	96	61.014	Saimiri_boliviensis_boliviensis
ENSAMXG00000002872	SUGP1	98	62.660	ENSSHAG00000012361	SUGP1	97	62.761	Sarcophilus_harrisii
ENSAMXG00000002872	SUGP1	100	70.236	ENSSFOG00015010075	sugp1	99	72.142	Scleropages_formosus
ENSAMXG00000002872	SUGP1	100	68.847	ENSSMAG00000002495	SUGP1	100	68.069	Scophthalmus_maximus
ENSAMXG00000002872	SUGP1	100	71.651	ENSSDUG00000016002	SUGP1	100	71.362	Seriola_dumerili
ENSAMXG00000002872	SUGP1	63	66.467	ENSSLDG00000000469	-	92	62.921	Seriola_lalandi_dorsalis
ENSAMXG00000002872	SUGP1	100	71.807	ENSSLDG00000011109	SUGP1	100	71.362	Seriola_lalandi_dorsalis
ENSAMXG00000002872	SUGP1	98	63.371	ENSSPUG00000007840	SUGP1	96	63.533	Sphenodon_punctatus
ENSAMXG00000002872	SUGP1	100	70.359	ENSSPAG00000023010	SUGP1	100	70.359	Stegastes_partitus
ENSAMXG00000002872	SUGP1	98	59.498	ENSSSCG00000036970	SUGP1	97	60.188	Sus_scrofa
ENSAMXG00000002872	SUGP1	83	52.358	ENSTGUG00000013941	-	94	51.264	Taeniopygia_guttata
ENSAMXG00000002872	SUGP1	100	67.347	ENSTRUG00000009724	SUGP1	100	67.347	Takifugu_rubripes
ENSAMXG00000002872	SUGP1	98	69.481	ENSTNIG00000015312	SUGP1	99	69.643	Tetraodon_nigroviridis
ENSAMXG00000002872	SUGP1	69	91.852	ENSTBEG00000016501	-	66	91.852	Tupaia_belangeri
ENSAMXG00000002872	SUGP1	98	60.380	ENSTTRG00000009868	SUGP1	96	60.601	Tursiops_truncatus
ENSAMXG00000002872	SUGP1	98	57.729	ENSUAMG00000000010	-	96	57.686	Ursus_americanus
ENSAMXG00000002872	SUGP1	90	57.290	ENSUMAG00000006358	SUGP1	96	57.388	Ursus_maritimus
ENSAMXG00000002872	SUGP1	77	58.228	ENSVPAG00000002122	SUGP1	83	58.228	Vicugna_pacos
ENSAMXG00000002872	SUGP1	98	59.810	ENSVVUG00000007569	SUGP1	96	60.283	Vulpes_vulpes
ENSAMXG00000002872	SUGP1	90	64.298	ENSXETG00000013044	sugp1	96	62.745	Xenopus_tropicalis
ENSAMXG00000002872	SUGP1	99	67.250	ENSXCOG00000008238	SUGP1	98	66.455	Xiphophorus_couchianus
ENSAMXG00000002872	SUGP1	100	67.083	ENSXMAG00000019331	SUGP1	100	66.927	Xiphophorus_maculatus