EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000003335 (Gene tree)
Gene ID: 103021331
Gene Symbol: larp4b
Alias: zgc:153918
Full Name: La ribonucleoprotein domain family member 4B
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 12338 bases
Position: chr3:16747309-16759646
Accession: 103021331
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000003406	La	PF05383.17	2.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000003406	-	2219	XM_007232656	ENSAMXP00000003406	721 (aa)	XP_007232718	W5K745

Gene Model

Click here to download ENSAMXG00000003335's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000003335's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000003335	larp4b	87	37.387	ENSAMXG00000001515	larp4ab	86	37.827
ENSAMXG00000003335	larp4b	87	36.024	ENSAMXG00000036493	larp4aa	84	37.969

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000003335	larp4b	97	50.742	ENSG00000107929	LARP4B	96	50.877	Homo_sapiens
ENSAMXG00000003335	larp4b	83	58.214	ENSAPOG00000020531	LARP4B	90	58.598	Acanthochromis_polyacanthus
ENSAMXG00000003335	larp4b	93	52.367	ENSAMEG00000001810	LARP4B	92	52.511	Ailuropoda_melanoleuca
ENSAMXG00000003335	larp4b	92	51.101	ENSAOCG00000007887	-	69	84.211	Amphiprion_ocellaris
ENSAMXG00000003335	larp4b	97	53.224	ENSAPEG00000002512	LARP4B	92	54.047	Amphiprion_percula
ENSAMXG00000003335	larp4b	97	52.058	ENSATEG00000012614	LARP4B	94	52.752	Anabas_testudineus
ENSAMXG00000003335	larp4b	93	53.912	ENSAPLG00000003813	LARP4B	90	54.196	Anas_platyrhynchos
ENSAMXG00000003335	larp4b	93	55.735	ENSACAG00000002858	LARP4B	91	56.029	Anolis_carolinensis
ENSAMXG00000003335	larp4b	97	51.087	ENSANAG00000007531	-	96	51.223	Aotus_nancymaae
ENSAMXG00000003335	larp4b	97	53.706	ENSACLG00000026356	LARP4B	94	54.839	Astatotilapia_calliptera
ENSAMXG00000003335	larp4b	93	54.971	ENSBTAG00000013899	LARP4B	92	55.117	Bos_taurus
ENSAMXG00000003335	larp4b	97	51.084	ENSCJAG00000018434	LARP4B	96	51.220	Callithrix_jacchus
ENSAMXG00000003335	larp4b	93	52.224	ENSCAFG00020004209	LARP4B	91	56.028	Canis_lupus_dingo
ENSAMXG00000003335	larp4b	93	53.041	ENSCHIG00000013543	LARP4B	92	53.182	Capra_hircus
ENSAMXG00000003335	larp4b	78	57.118	ENSTSYG00000002568	LARP4B	93	57.293	Carlito_syrichta
ENSAMXG00000003335	larp4b	80	52.115	ENSCAPG00000009725	LARP4B	78	52.115	Cavia_aperea
ENSAMXG00000003335	larp4b	97	51.622	ENSCPOG00000009375	LARP4B	96	51.757	Cavia_porcellus
ENSAMXG00000003335	larp4b	97	50.951	ENSCCAG00000024869	LARP4B	96	51.495	Cebus_capucinus
ENSAMXG00000003335	larp4b	97	50.678	ENSCATG00000019750	LARP4B	96	50.813	Cercocebus_atys
ENSAMXG00000003335	larp4b	93	54.203	ENSCLAG00000011570	LARP4B	92	54.348	Chinchilla_lanigera
ENSAMXG00000003335	larp4b	93	55.378	ENSCPBG00000017063	LARP4B	92	55.669	Chrysemys_picta_bellii
ENSAMXG00000003335	larp4b	97	48.780	ENSCANG00000038021	LARP4B	96	48.916	Colobus_angolensis_palliatus
ENSAMXG00000003335	larp4b	97	52.038	ENSCGRG00001022930	Larp4b	95	56.876	Cricetulus_griseus_chok1gshd
ENSAMXG00000003335	larp4b	97	52.038	ENSCGRG00000006022	Larp4b	95	56.876	Cricetulus_griseus_crigri
ENSAMXG00000003335	larp4b	92	53.055	ENSCSEG00000007342	LARP4B	89	53.204	Cynoglossus_semilaevis
ENSAMXG00000003335	larp4b	96	51.812	ENSCVAG00000008910	LARP4B	94	52.151	Cyprinodon_variegatus
ENSAMXG00000003335	larp4b	100	70.919	ENSDARG00000062146	larp4b	98	72.245	Danio_rerio
ENSAMXG00000003335	larp4b	89	53.364	ENSDNOG00000045543	-	100	56.582	Dasypus_novemcinctus
ENSAMXG00000003335	larp4b	93	50.640	ENSDORG00000009328	Larp4b	99	49.130	Dipodomys_ordii
ENSAMXG00000003335	larp4b	79	53.846	ENSETEG00000011249	LARP4B	80	53.846	Echinops_telfairi
ENSAMXG00000003335	larp4b	92	52.017	ENSEASG00005019068	-	91	52.161	Equus_asinus_asinus
ENSAMXG00000003335	larp4b	92	52.161	ENSECAG00000024040	LARP4B	91	52.305	Equus_caballus
ENSAMXG00000003335	larp4b	95	50.349	ENSEEUG00000008391	LARP4B	94	49.864	Erinaceus_europaeus
ENSAMXG00000003335	larp4b	91	42.643	ENSELUG00000001417	-	94	42.643	Esox_lucius
ENSAMXG00000003335	larp4b	97	53.183	ENSELUG00000008626	LARP4B	95	53.733	Esox_lucius
ENSAMXG00000003335	larp4b	93	52.211	ENSFCAG00000000721	-	92	52.790	Felis_catus
ENSAMXG00000003335	larp4b	93	56.140	ENSFALG00000006961	LARP4B	92	56.433	Ficedula_albicollis
ENSAMXG00000003335	larp4b	93	52.468	ENSFDAG00000006158	LARP4B	89	52.609	Fukomys_damarensis
ENSAMXG00000003335	larp4b	96	46.970	ENSFHEG00000013037	LARP4B	64	84.615	Fundulus_heteroclitus
ENSAMXG00000003335	larp4b	81	58.780	ENSGMOG00000010818	-	90	60.147	Gadus_morhua
ENSAMXG00000003335	larp4b	93	55.167	ENSGALG00000006672	LARP4B	92	55.313	Gallus_gallus
ENSAMXG00000003335	larp4b	91	53.456	ENSGACG00000017535	LARP4B	95	52.980	Gasterosteus_aculeatus
ENSAMXG00000003335	larp4b	87	53.918	ENSGAGG00000008598	LARP4B	91	54.232	Gopherus_agassizii
ENSAMXG00000003335	larp4b	97	50.742	ENSGGOG00000003572	LARP4B	96	50.877	Gorilla_gorilla
ENSAMXG00000003335	larp4b	97	53.567	ENSHBUG00000007535	LARP4B	94	54.913	Haplochromis_burtoni
ENSAMXG00000003335	larp4b	93	52.809	ENSHGLG00000012936	LARP4B	99	51.297	Heterocephalus_glaber_female
ENSAMXG00000003335	larp4b	93	52.750	ENSHGLG00100016220	-	92	52.891	Heterocephalus_glaber_male
ENSAMXG00000003335	larp4b	90	44.611	ENSHGLG00100017261	-	100	44.611	Heterocephalus_glaber_male
ENSAMXG00000003335	larp4b	86	58.730	ENSHCOG00000011581	LARP4B	81	58.730	Hippocampus_comes
ENSAMXG00000003335	larp4b	99	76.243	ENSIPUG00000009705	larp4b	99	77.063	Ictalurus_punctatus
ENSAMXG00000003335	larp4b	97	50.273	ENSSTOG00000000587	LARP4B	95	58.782	Ictidomys_tridecemlineatus
ENSAMXG00000003335	larp4b	97	51.578	ENSJJAG00000020847	Larp4b	96	51.715	Jaculus_jaculus
ENSAMXG00000003335	larp4b	97	52.925	ENSKMAG00000021674	LARP4B	94	53.406	Kryptolebias_marmoratus
ENSAMXG00000003335	larp4b	81	58.484	ENSLBEG00000025293	-	82	59.046	Labrus_bergylta
ENSAMXG00000003335	larp4b	74	60.111	ENSLACG00000009492	LARP4B	77	61.296	Latimeria_chalumnae
ENSAMXG00000003335	larp4b	97	56.643	ENSLOCG00000012290	larp4b	95	56.923	Lepisosteus_oculatus
ENSAMXG00000003335	larp4b	95	51.247	ENSLAFG00000015334	LARP4B	94	52.232	Loxodonta_africana
ENSAMXG00000003335	larp4b	97	50.678	ENSMFAG00000001766	LARP4B	96	48.916	Macaca_fascicularis
ENSAMXG00000003335	larp4b	97	50.678	ENSMMUG00000005279	LARP4B	96	50.813	Macaca_mulatta
ENSAMXG00000003335	larp4b	97	50.542	ENSMNEG00000014019	LARP4B	96	48.780	Macaca_nemestrina
ENSAMXG00000003335	larp4b	97	50.742	ENSMLEG00000035198	LARP4B	96	50.877	Mandrillus_leucophaeus
ENSAMXG00000003335	larp4b	97	53.504	ENSMAMG00000013742	LARP4B	94	53.774	Mastacembelus_armatus
ENSAMXG00000003335	larp4b	81	57.947	ENSMZEG00005006498	-	95	59.174	Maylandia_zebra
ENSAMXG00000003335	larp4b	77	58.347	ENSMZEG00005014594	-	80	59.022	Maylandia_zebra
ENSAMXG00000003335	larp4b	93	51.778	ENSMGAG00000005472	LARP4B	92	52.205	Meleagris_gallopavo
ENSAMXG00000003335	larp4b	97	51.967	ENSMAUG00000021657	Larp4b	99	50.720	Mesocricetus_auratus
ENSAMXG00000003335	larp4b	91	54.273	ENSMICG00000001301	LARP4B	90	53.812	Microcebus_murinus
ENSAMXG00000003335	larp4b	92	51.085	ENSMOCG00000021452	Larp4b	99	51.230	Microtus_ochrogaster
ENSAMXG00000003335	larp4b	77	55.575	ENSMMOG00000011253	-	80	55.923	Mola_mola
ENSAMXG00000003335	larp4b	91	56.561	ENSMODG00000005957	LARP4B	89	56.259	Monodelphis_domestica
ENSAMXG00000003335	larp4b	93	48.164	ENSMALG00000012432	LARP4B	96	46.950	Monopterus_albus
ENSAMXG00000003335	larp4b	91	53.891	MGP_CAROLIEiJ_G0018216	Larp4b	95	58.314	Mus_caroli
ENSAMXG00000003335	larp4b	91	53.801	ENSMUSG00000033499	Larp4b	95	58.140	Mus_musculus
ENSAMXG00000003335	larp4b	97	51.705	MGP_PahariEiJ_G0019266	Larp4b	95	58.314	Mus_pahari
ENSAMXG00000003335	larp4b	91	53.801	MGP_SPRETEiJ_G0019074	Larp4b	95	58.140	Mus_spretus
ENSAMXG00000003335	larp4b	91	52.754	ENSMPUG00000016220	LARP4B	89	52.825	Mustela_putorius_furo
ENSAMXG00000003335	larp4b	86	53.895	ENSMLUG00000005880	LARP4B	91	53.478	Myotis_lucifugus
ENSAMXG00000003335	larp4b	97	51.827	ENSNGAG00000001750	Larp4b	94	52.545	Nannospalax_galili
ENSAMXG00000003335	larp4b	77	51.478	ENSNBRG00000020018	LARP4B	80	51.826	Neolamprologus_brichardi
ENSAMXG00000003335	larp4b	97	50.337	ENSNLEG00000013442	LARP4B	96	50.877	Nomascus_leucogenys
ENSAMXG00000003335	larp4b	74	44.595	ENSMEUG00000013114	-	79	41.429	Notamacropus_eugenii
ENSAMXG00000003335	larp4b	92	50.072	ENSOPRG00000003300	LARP4B	90	50.215	Ochotona_princeps
ENSAMXG00000003335	larp4b	93	48.801	ENSODEG00000001109	LARP4B	92	48.942	Octodon_degus
ENSAMXG00000003335	larp4b	97	53.639	ENSONIG00000017705	LARP4B	94	54.987	Oreochromis_niloticus
ENSAMXG00000003335	larp4b	97	50.471	ENSOANG00000006100	LARP4B	96	50.740	Ornithorhynchus_anatinus
ENSAMXG00000003335	larp4b	97	48.942	ENSOCUG00000004950	LARP4B	93	49.074	Oryctolagus_cuniculus
ENSAMXG00000003335	larp4b	96	53.378	ENSORLG00000006080	LARP4B	94	53.649	Oryzias_latipes
ENSAMXG00000003335	larp4b	96	52.695	ENSORLG00020020940	LARP4B	94	53.235	Oryzias_latipes_hni
ENSAMXG00000003335	larp4b	96	53.586	ENSORLG00015020608	LARP4B	94	53.721	Oryzias_latipes_hsok
ENSAMXG00000003335	larp4b	97	52.097	ENSOMEG00000019619	LARP4B	94	52.639	Oryzias_melastigma
ENSAMXG00000003335	larp4b	93	53.207	ENSOGAG00000011540	LARP4B	95	53.353	Otolemur_garnettii
ENSAMXG00000003335	larp4b	93	52.817	ENSOARG00000015320	LARP4B	90	52.958	Ovis_aries
ENSAMXG00000003335	larp4b	97	50.877	ENSPPAG00000039232	LARP4B	96	51.012	Pan_paniscus
ENSAMXG00000003335	larp4b	93	52.361	ENSPPRG00000009489	LARP4B	92	52.504	Panthera_pardus
ENSAMXG00000003335	larp4b	93	52.361	ENSPTIG00000008543	LARP4B	92	52.504	Panthera_tigris_altaica
ENSAMXG00000003335	larp4b	97	50.877	ENSPTRG00000002235	LARP4B	96	51.012	Pan_troglodytes
ENSAMXG00000003335	larp4b	97	50.678	ENSPANG00000023546	LARP4B	96	48.916	Papio_anubis
ENSAMXG00000003335	larp4b	97	53.250	ENSPKIG00000012368	LARP4B	94	54.712	Paramormyrops_kingsleyae
ENSAMXG00000003335	larp4b	77	62.037	ENSPSIG00000005600	LARP4B	99	62.654	Pelodiscus_sinensis
ENSAMXG00000003335	larp4b	94	47.599	ENSPMGG00000008261	LARP4B	86	48.383	Periophthalmus_magnuspinnatus
ENSAMXG00000003335	larp4b	97	51.503	ENSPEMG00000014052	Larp4b	96	51.639	Peromyscus_maniculatus_bairdii
ENSAMXG00000003335	larp4b	96	51.200	ENSPFOG00000000029	LARP4B	94	51.936	Poecilia_formosa
ENSAMXG00000003335	larp4b	96	51.802	ENSPLAG00000002871	LARP4B	94	52.270	Poecilia_latipinna
ENSAMXG00000003335	larp4b	96	51.421	ENSPMEG00000016361	LARP4B	94	52.168	Poecilia_mexicana
ENSAMXG00000003335	larp4b	97	50.538	ENSPPYG00000002035	LARP4B	93	50.672	Pongo_abelii
ENSAMXG00000003335	larp4b	93	52.468	ENSPCOG00000014688	LARP4B	96	51.279	Propithecus_coquereli
ENSAMXG00000003335	larp4b	74	53.902	ENSPVAG00000009784	LARP4B	75	54.083	Pteropus_vampyrus
ENSAMXG00000003335	larp4b	97	53.567	ENSPNYG00000024252	LARP4B	94	54.913	Pundamilia_nyererei
ENSAMXG00000003335	larp4b	100	87.828	ENSPNAG00000028956	larp4b	98	88.062	Pygocentrus_nattereri
ENSAMXG00000003335	larp4b	91	54.118	ENSRNOG00000015888	Larp4b	99	52.148	Rattus_norvegicus
ENSAMXG00000003335	larp4b	97	50.880	ENSRBIG00000033294	LARP4B	96	51.015	Rhinopithecus_bieti
ENSAMXG00000003335	larp4b	97	50.880	ENSRROG00000033879	LARP4B	96	51.015	Rhinopithecus_roxellana
ENSAMXG00000003335	larp4b	97	47.283	ENSSBOG00000021109	LARP4B	96	47.418	Saimiri_boliviensis_boliviensis
ENSAMXG00000003335	larp4b	91	55.539	ENSSHAG00000013392	LARP4B	94	53.923	Sarcophilus_harrisii
ENSAMXG00000003335	larp4b	98	52.589	ENSSFOG00015003256	LARP4B	89	53.542	Scleropages_formosus
ENSAMXG00000003335	larp4b	97	52.222	ENSSMAG00000005982	-	94	52.778	Scophthalmus_maximus
ENSAMXG00000003335	larp4b	97	53.020	ENSSDUG00000006704	LARP4B	94	54.094	Seriola_dumerili
ENSAMXG00000003335	larp4b	77	59.304	ENSSLDG00000020660	LARP4B	83	59.722	Seriola_lalandi_dorsalis
ENSAMXG00000003335	larp4b	57	82.474	ENSSARG00000001243	-	68	82.474	Sorex_araneus
ENSAMXG00000003335	larp4b	73	60.300	ENSSPUG00000013734	-	81	60.674	Sphenodon_punctatus
ENSAMXG00000003335	larp4b	93	55.423	ENSSPUG00000002102	-	90	55.655	Sphenodon_punctatus
ENSAMXG00000003335	larp4b	78	58.031	ENSSPAG00000014628	LARP4B	80	58.204	Stegastes_partitus
ENSAMXG00000003335	larp4b	93	51.920	ENSSSCG00000011162	LARP4B	95	55.668	Sus_scrofa
ENSAMXG00000003335	larp4b	93	54.427	ENSTGUG00000000811	-	92	54.717	Taeniopygia_guttata
ENSAMXG00000003335	larp4b	92	50.143	ENSTNIG00000007991	LARP4B	100	51.729	Tetraodon_nigroviridis
ENSAMXG00000003335	larp4b	92	51.437	ENSTNIG00000004571	-	93	51.007	Tetraodon_nigroviridis
ENSAMXG00000003335	larp4b	67	55.315	ENSTTRG00000011151	LARP4B	68	55.315	Tursiops_truncatus
ENSAMXG00000003335	larp4b	89	51.952	ENSUAMG00000016461	LARP4B	95	52.102	Ursus_americanus
ENSAMXG00000003335	larp4b	93	52.443	ENSUMAG00000016127	LARP4B	92	52.586	Ursus_maritimus
ENSAMXG00000003335	larp4b	93	52.367	ENSVVUG00000008641	LARP4B	97	51.048	Vulpes_vulpes
ENSAMXG00000003335	larp4b	97	55.680	ENSXETG00000016882	larp4b	96	55.961	Xenopus_tropicalis
ENSAMXG00000003335	larp4b	96	48.645	ENSXCOG00000019952	LARP4B	65	81.818	Xiphophorus_couchianus
ENSAMXG00000003335	larp4b	96	52.617	ENSXMAG00000021533	LARP4B	94	52.925	Xiphophorus_maculatus