EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000003371 (Gene tree)
Gene ID: 103032603
Gene Symbol: nup35
Alias: fj68d11|wu:fj68d11|zgc:65979
Full Name: nucleoporin 35
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 8987 bases
Position: chr19:1870449-1879435
Accession: 103032603
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000043453	Nup35_RRM	PF05172.13	2.1e-26	1	1
ENSAMXP00000003528	Nup35_RRM	PF05172.13	2.3e-26	1	1
ENSAMXP00000043453	Nup35_RRM_2	PF14605.6	2.2e-11	1	1
ENSAMXP00000003528	Nup35_RRM_2	PF14605.6	2.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000003528	-	2671	XM_022680053	ENSAMXP00000003528	316 (aa)	XP_022535774	W5K7G7
ENSAMXT00000044774	-	3504	-	ENSAMXP00000043453	305 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000003371's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000003371's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000003371	nup35	100	76.375	ENSG00000163002	NUP35	100	82.895	Homo_sapiens
ENSAMXG00000003371	nup35	100	62.987	ENSAPOG00000003630	nup35	99	63.259	Acanthochromis_polyacanthus
ENSAMXG00000003371	nup35	100	75.641	ENSAMEG00000001191	NUP35	97	75.472	Ailuropoda_melanoleuca
ENSAMXG00000003371	nup35	84	63.281	ENSACIG00000023984	nup35	98	63.672	Amphilophus_citrinellus
ENSAMXG00000003371	nup35	100	63.636	ENSAOCG00000007484	nup35	99	63.898	Amphiprion_ocellaris
ENSAMXG00000003371	nup35	100	63.636	ENSAPEG00000020027	nup35	99	63.898	Amphiprion_percula
ENSAMXG00000003371	nup35	100	65.260	ENSATEG00000019305	nup35	98	64.151	Anabas_testudineus
ENSAMXG00000003371	nup35	100	73.718	ENSAPLG00000009161	NUP35	98	72.586	Anas_platyrhynchos
ENSAMXG00000003371	nup35	100	72.581	ENSACAG00000008692	NUP35	96	72.381	Anolis_carolinensis
ENSAMXG00000003371	nup35	100	76.052	ENSANAG00000021090	NUP35	96	76.115	Aotus_nancymaae
ENSAMXG00000003371	nup35	100	63.023	ENSACLG00000013918	nup35	99	62.975	Astatotilapia_calliptera
ENSAMXG00000003371	nup35	100	75.484	ENSBTAG00000009777	NUP35	97	75.316	Bos_taurus
ENSAMXG00000003371	nup35	100	76.052	ENSCJAG00000011104	NUP35	96	76.115	Callithrix_jacchus
ENSAMXG00000003371	nup35	100	75.641	ENSCAFG00000031849	NUP35	100	75.641	Canis_familiaris
ENSAMXG00000003371	nup35	100	75.641	ENSCAFG00020008408	NUP35	96	75.633	Canis_lupus_dingo
ENSAMXG00000003371	nup35	100	75.806	ENSCHIG00000023148	NUP35	100	75.806	Capra_hircus
ENSAMXG00000003371	nup35	100	75.405	ENSTSYG00000002117	NUP35	97	75.238	Carlito_syrichta
ENSAMXG00000003371	nup35	100	60.897	ENSCAPG00000005703	NUP35	97	62.420	Cavia_aperea
ENSAMXG00000003371	nup35	100	74.516	ENSCPOG00000011906	NUP35	97	75.962	Cavia_porcellus
ENSAMXG00000003371	nup35	100	76.052	ENSCCAG00000025009	NUP35	100	75.000	Cebus_capucinus
ENSAMXG00000003371	nup35	100	64.725	ENSCATG00000033109	NUP35	98	64.174	Cercocebus_atys
ENSAMXG00000003371	nup35	100	75.484	ENSCLAG00000012559	NUP35	97	75.316	Chinchilla_lanigera
ENSAMXG00000003371	nup35	100	76.052	ENSCSAG00000012620	NUP35	96	76.115	Chlorocebus_sabaeus
ENSAMXG00000003371	nup35	100	74.839	ENSCPBG00000001303	NUP35	97	74.841	Chrysemys_picta_bellii
ENSAMXG00000003371	nup35	99	43.750	ENSCING00000009659	-	98	44.000	Ciona_intestinalis
ENSAMXG00000003371	nup35	99	42.687	ENSCSAVG00000007467	-	99	43.027	Ciona_savignyi
ENSAMXG00000003371	nup35	100	76.052	ENSCANG00000030785	NUP35	100	76.052	Colobus_angolensis_palliatus
ENSAMXG00000003371	nup35	100	73.701	ENSCGRG00001018638	-	97	73.567	Cricetulus_griseus_chok1gshd
ENSAMXG00000003371	nup35	100	73.701	ENSCGRG00000011313	-	97	73.567	Cricetulus_griseus_crigri
ENSAMXG00000003371	nup35	100	64.725	ENSCSEG00000000938	nup35	99	64.650	Cynoglossus_semilaevis
ENSAMXG00000003371	nup35	100	66.019	ENSCVAG00000001792	nup35	99	64.907	Cyprinodon_variegatus
ENSAMXG00000003371	nup35	100	81.311	ENSDARG00000012222	nup35	100	81.311	Danio_rerio
ENSAMXG00000003371	nup35	100	74.516	ENSDNOG00000009513	-	85	74.603	Dasypus_novemcinctus
ENSAMXG00000003371	nup35	100	73.871	ENSDNOG00000038754	-	97	73.734	Dasypus_novemcinctus
ENSAMXG00000003371	nup35	100	75.728	ENSDORG00000010458	-	97	75.884	Dipodomys_ordii
ENSAMXG00000003371	nup35	100	75.484	ENSETEG00000005896	NUP35	99	75.641	Echinops_telfairi
ENSAMXG00000003371	nup35	100	54.717	ENSEBUG00000013034	nup35	100	54.711	Eptatretus_burgeri
ENSAMXG00000003371	nup35	100	75.806	ENSEASG00005022100	NUP35	97	75.633	Equus_asinus_asinus
ENSAMXG00000003371	nup35	100	75.806	ENSECAG00000003968	NUP35	100	75.806	Equus_caballus
ENSAMXG00000003371	nup35	100	67.419	ENSEEUG00000008469	NUP35	97	67.405	Erinaceus_europaeus
ENSAMXG00000003371	nup35	100	79.739	ENSELUG00000013693	nup35	100	79.739	Esox_lucius
ENSAMXG00000003371	nup35	100	73.718	ENSFCAG00000025636	NUP35	100	74.679	Felis_catus
ENSAMXG00000003371	nup35	100	71.935	ENSFALG00000013175	NUP35	97	71.975	Ficedula_albicollis
ENSAMXG00000003371	nup35	100	74.434	ENSFDAG00000017998	NUP35	97	74.286	Fukomys_damarensis
ENSAMXG00000003371	nup35	100	64.935	ENSFHEG00000010229	nup35	99	65.495	Fundulus_heteroclitus
ENSAMXG00000003371	nup35	83	62.451	ENSGMOG00000003337	nup35	100	62.451	Gadus_morhua
ENSAMXG00000003371	nup35	100	72.903	ENSGALG00000002689	NUP35	97	72.930	Gallus_gallus
ENSAMXG00000003371	nup35	100	63.226	ENSGAFG00000022048	nup35	99	64.444	Gambusia_affinis
ENSAMXG00000003371	nup35	100	64.052	ENSGACG00000008203	nup35	99	64.952	Gasterosteus_aculeatus
ENSAMXG00000003371	nup35	100	75.241	ENSGAGG00000001967	NUP35	100	75.241	Gopherus_agassizii
ENSAMXG00000003371	nup35	100	76.375	ENSGGOG00000009919	NUP35	96	76.433	Gorilla_gorilla
ENSAMXG00000003371	nup35	100	73.871	ENSHGLG00000013230	NUP35	97	73.734	Heterocephalus_glaber_female
ENSAMXG00000003371	nup35	100	58.387	ENSHGLG00000000414	-	97	58.599	Heterocephalus_glaber_female
ENSAMXG00000003371	nup35	97	63.123	ENSHGLG00000008616	-	93	63.279	Heterocephalus_glaber_female
ENSAMXG00000003371	nup35	97	63.123	ENSHGLG00100000091	-	94	63.279	Heterocephalus_glaber_male
ENSAMXG00000003371	nup35	100	58.387	ENSHGLG00100010869	-	97	58.599	Heterocephalus_glaber_male
ENSAMXG00000003371	nup35	100	73.871	ENSHGLG00100012840	NUP35	97	73.734	Heterocephalus_glaber_male
ENSAMXG00000003371	nup35	100	63.279	ENSHCOG00000003882	nup35	99	63.226	Hippocampus_comes
ENSAMXG00000003371	nup35	100	77.049	ENSIPUG00000002798	nup35	100	75.235	Ictalurus_punctatus
ENSAMXG00000003371	nup35	100	74.434	ENSSTOG00000000711	NUP35	97	74.286	Ictidomys_tridecemlineatus
ENSAMXG00000003371	nup35	100	64.610	ENSJJAG00000007003	-	94	64.856	Jaculus_jaculus
ENSAMXG00000003371	nup35	100	74.110	ENSJJAG00000016432	-	97	74.121	Jaculus_jaculus
ENSAMXG00000003371	nup35	88	68.750	ENSJJAG00000006387	-	91	68.750	Jaculus_jaculus
ENSAMXG00000003371	nup35	99	66.558	ENSJJAG00000017434	-	96	66.773	Jaculus_jaculus
ENSAMXG00000003371	nup35	100	62.848	ENSKMAG00000011162	nup35	100	64.000	Kryptolebias_marmoratus
ENSAMXG00000003371	nup35	100	52.288	ENSLBEG00000012416	nup35	99	52.412	Labrus_bergylta
ENSAMXG00000003371	nup35	100	74.920	ENSLACG00000008247	NUP35	100	74.920	Latimeria_chalumnae
ENSAMXG00000003371	nup35	100	76.699	ENSLOCG00000006726	nup35	99	76.677	Lepisosteus_oculatus
ENSAMXG00000003371	nup35	100	74.286	ENSLAFG00000008155	NUP35	98	73.700	Loxodonta_africana
ENSAMXG00000003371	nup35	100	75.728	ENSMFAG00000000834	NUP35	100	75.728	Macaca_fascicularis
ENSAMXG00000003371	nup35	100	76.052	ENSMMUG00000004140	NUP35	99	76.206	Macaca_mulatta
ENSAMXG00000003371	nup35	100	76.052	ENSMNEG00000029014	NUP35	96	76.115	Macaca_nemestrina
ENSAMXG00000003371	nup35	100	76.052	ENSMLEG00000035422	NUP35	100	76.052	Mandrillus_leucophaeus
ENSAMXG00000003371	nup35	100	63.725	ENSMAMG00000013232	nup35	99	62.579	Mastacembelus_armatus
ENSAMXG00000003371	nup35	100	62.939	ENSMZEG00005020619	nup35	95	62.893	Maylandia_zebra
ENSAMXG00000003371	nup35	100	72.903	ENSMGAG00000004412	NUP35	95	72.903	Meleagris_gallopavo
ENSAMXG00000003371	nup35	100	74.757	ENSMAUG00000013776	-	97	74.603	Mesocricetus_auratus
ENSAMXG00000003371	nup35	100	73.871	ENSMICG00000006790	NUP35	100	75.161	Microcebus_murinus
ENSAMXG00000003371	nup35	100	74.757	ENSMOCG00000014754	-	97	74.603	Microtus_ochrogaster
ENSAMXG00000003371	nup35	100	63.725	ENSMMOG00000005026	nup35	99	63.666	Mola_mola
ENSAMXG00000003371	nup35	100	73.871	ENSMODG00000010578	NUP35	96	73.885	Monodelphis_domestica
ENSAMXG00000003371	nup35	100	65.359	ENSMALG00000020187	nup35	99	65.273	Monopterus_albus
ENSAMXG00000003371	nup35	100	74.110	MGP_CAROLIEiJ_G0023709	-	97	73.968	Mus_caroli
ENSAMXG00000003371	nup35	100	73.786	ENSMUSG00000026999	Nup35	97	73.651	Mus_musculus
ENSAMXG00000003371	nup35	100	74.757	MGP_PahariEiJ_G0025160	-	97	74.603	Mus_pahari
ENSAMXG00000003371	nup35	86	64.548	MGP_SPRETEiJ_G0033063	-	99	64.548	Mus_spretus
ENSAMXG00000003371	nup35	100	74.679	ENSMPUG00000002063	NUP35	97	75.472	Mustela_putorius_furo
ENSAMXG00000003371	nup35	100	77.097	ENSMLUG00000013154	NUP35	97	76.899	Myotis_lucifugus
ENSAMXG00000003371	nup35	100	73.786	ENSNGAG00000012107	-	97	73.651	Nannospalax_galili
ENSAMXG00000003371	nup35	100	62.092	ENSNBRG00000020466	nup35	97	63.407	Neolamprologus_brichardi
ENSAMXG00000003371	nup35	100	76.375	ENSNLEG00000035026	NUP35	100	76.375	Nomascus_leucogenys
ENSAMXG00000003371	nup35	68	54.028	ENSMEUG00000003001	-	65	54.028	Notamacropus_eugenii
ENSAMXG00000003371	nup35	83	72.656	ENSOPRG00000016609	NUP35	78	72.656	Ochotona_princeps
ENSAMXG00000003371	nup35	100	74.839	ENSODEG00000011202	-	97	74.684	Octodon_degus
ENSAMXG00000003371	nup35	99	53.595	ENSODEG00000000280	-	95	53.846	Octodon_degus
ENSAMXG00000003371	nup35	100	62.821	ENSONIG00000016251	nup35	99	62.776	Oreochromis_niloticus
ENSAMXG00000003371	nup35	74	77.586	ENSOANG00000006793	-	97	77.542	Ornithorhynchus_anatinus
ENSAMXG00000003371	nup35	100	75.081	ENSOCUG00000014407	NUP35	97	74.921	Oryctolagus_cuniculus
ENSAMXG00000003371	nup35	100	63.226	ENSORLG00000013588	nup35	100	63.226	Oryzias_latipes
ENSAMXG00000003371	nup35	100	63.226	ENSORLG00020008201	nup35	99	63.175	Oryzias_latipes_hni
ENSAMXG00000003371	nup35	100	63.226	ENSORLG00015011096	nup35	100	63.226	Oryzias_latipes_hsok
ENSAMXG00000003371	nup35	100	62.222	ENSOMEG00000007628	nup35	99	62.187	Oryzias_melastigma
ENSAMXG00000003371	nup35	100	73.226	ENSOGAG00000011920	NUP35	97	74.367	Otolemur_garnettii
ENSAMXG00000003371	nup35	100	75.806	ENSOARG00000016728	NUP35	97	75.633	Ovis_aries
ENSAMXG00000003371	nup35	100	76.375	ENSPPAG00000036316	NUP35	100	76.375	Pan_paniscus
ENSAMXG00000003371	nup35	100	74.038	ENSPPRG00000024726	NUP35	100	75.000	Panthera_pardus
ENSAMXG00000003371	nup35	100	74.038	ENSPTIG00000017299	NUP35	96	75.079	Panthera_tigris_altaica
ENSAMXG00000003371	nup35	100	76.375	ENSPTRG00000012711	NUP35	100	76.375	Pan_troglodytes
ENSAMXG00000003371	nup35	100	76.052	ENSPANG00000013686	NUP35	96	76.115	Papio_anubis
ENSAMXG00000003371	nup35	100	82.353	ENSPKIG00000022051	nup35	99	82.468	Paramormyrops_kingsleyae
ENSAMXG00000003371	nup35	100	73.226	ENSPSIG00000002146	NUP35	100	73.226	Pelodiscus_sinensis
ENSAMXG00000003371	nup35	100	61.039	ENSPMGG00000022915	nup35	97	60.897	Periophthalmus_magnuspinnatus
ENSAMXG00000003371	nup35	100	75.081	ENSPEMG00000014718	-	97	74.921	Peromyscus_maniculatus_bairdii
ENSAMXG00000003371	nup35	100	57.367	ENSPMAG00000006604	nup35	97	57.585	Petromyzon_marinus
ENSAMXG00000003371	nup35	100	75.161	ENSPCIG00000015482	NUP35	96	75.159	Phascolarctos_cinereus
ENSAMXG00000003371	nup35	100	63.226	ENSPFOG00000010020	nup35	99	63.810	Poecilia_formosa
ENSAMXG00000003371	nup35	100	62.903	ENSPLAG00000005867	nup35	99	63.492	Poecilia_latipinna
ENSAMXG00000003371	nup35	100	65.246	ENSPMEG00000010552	nup35	99	64.856	Poecilia_mexicana
ENSAMXG00000003371	nup35	100	64.590	ENSPREG00000021005	nup35	99	64.516	Poecilia_reticulata
ENSAMXG00000003371	nup35	100	76.375	ENSPPYG00000012998	-	77	76.358	Pongo_abelii
ENSAMXG00000003371	nup35	100	53.871	ENSPCAG00000000605	NUP35	95	54.167	Procavia_capensis
ENSAMXG00000003371	nup35	100	74.516	ENSPCOG00000024097	NUP35	97	75.316	Propithecus_coquereli
ENSAMXG00000003371	nup35	100	75.806	ENSPVAG00000015908	NUP35	97	75.633	Pteropus_vampyrus
ENSAMXG00000003371	nup35	100	64.052	ENSPNYG00000012486	nup35	95	63.987	Pundamilia_nyererei
ENSAMXG00000003371	nup35	100	92.787	ENSPNAG00000005181	nup35	100	92.405	Pygocentrus_nattereri
ENSAMXG00000003371	nup35	100	75.728	ENSRNOG00000009290	Nup35	97	75.556	Rattus_norvegicus
ENSAMXG00000003371	nup35	100	76.052	ENSRBIG00000039427	NUP35	100	76.052	Rhinopithecus_bieti
ENSAMXG00000003371	nup35	100	75.728	ENSRROG00000026525	NUP35	98	77.949	Rhinopithecus_roxellana
ENSAMXG00000003371	nup35	100	75.728	ENSSBOG00000018676	NUP35	99	76.142	Saimiri_boliviensis_boliviensis
ENSAMXG00000003371	nup35	100	75.484	ENSSHAG00000009746	NUP35	96	75.478	Sarcophilus_harrisii
ENSAMXG00000003371	nup35	100	81.639	ENSSFOG00015002390	nup35	99	81.290	Scleropages_formosus
ENSAMXG00000003371	nup35	100	63.725	ENSSMAG00000015651	nup35	99	63.666	Scophthalmus_maximus
ENSAMXG00000003371	nup35	100	65.033	ENSSDUG00000013118	nup35	99	64.465	Seriola_dumerili
ENSAMXG00000003371	nup35	100	63.578	ENSSLDG00000018249	nup35	98	64.151	Seriola_lalandi_dorsalis
ENSAMXG00000003371	nup35	100	56.958	ENSSARG00000001535	-	99	57.235	Sorex_araneus
ENSAMXG00000003371	nup35	100	73.226	ENSSPUG00000018651	NUP35	98	72.274	Sphenodon_punctatus
ENSAMXG00000003371	nup35	100	63.725	ENSSPAG00000018264	nup35	99	62.857	Stegastes_partitus
ENSAMXG00000003371	nup35	100	76.129	ENSSSCG00000028949	NUP35	97	75.949	Sus_scrofa
ENSAMXG00000003371	nup35	100	71.154	ENSTGUG00000011278	NUP35	97	71.203	Taeniopygia_guttata
ENSAMXG00000003371	nup35	93	58.824	ENSTRUG00000014111	nup35	99	59.044	Takifugu_rubripes
ENSAMXG00000003371	nup35	100	53.871	ENSTNIG00000011568	nup35	95	54.286	Tetraodon_nigroviridis
ENSAMXG00000003371	nup35	100	73.226	ENSTBEG00000003328	NUP35	97	73.101	Tupaia_belangeri
ENSAMXG00000003371	nup35	100	64.194	ENSTTRG00000002512	NUP35	96	64.444	Tursiops_truncatus
ENSAMXG00000003371	nup35	64	77.157	ENSUAMG00000018696	-	96	77.157	Ursus_americanus
ENSAMXG00000003371	nup35	92	74.306	ENSUMAG00000017104	NUP35	96	75.170	Ursus_maritimus
ENSAMXG00000003371	nup35	100	76.129	ENSVPAG00000011898	NUP35	97	75.949	Vicugna_pacos
ENSAMXG00000003371	nup35	100	75.321	ENSVVUG00000016832	NUP35	100	75.321	Vulpes_vulpes
ENSAMXG00000003371	nup35	100	64.194	ENSXETG00000001335	nup35	95	64.331	Xenopus_tropicalis
ENSAMXG00000003371	nup35	100	63.987	ENSXMAG00000000409	nup35	99	64.557	Xiphophorus_maculatus