EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000003440 (Gene tree)
Gene ID: 103036377
Gene Symbol: pcbp3
Alias: zgc:109966
Full Name: poly(rC)-binding protein 3
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 20667 bases
Position: chr19:7845985-7866651
Accession: 103036377
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000003538	KH_1	PF00013.29	5.6e-54	1	3
ENSAMXP00000003538	KH_1	PF00013.29	5.6e-54	2	3
ENSAMXP00000003538	KH_1	PF00013.29	5.6e-54	3	3
ENSAMXP00000003538	KH_2	PF07650.17	9e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000003538	-	1145	XM_022680156	ENSAMXP00000003538	350 (aa)	XP_022535877	W5K7H7

Gene Model

Click here to download ENSAMXG00000003440's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000003440's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000003440	pcbp3	95	86.486	ENSAMXG00000013588	-	100	86.486
ENSAMXG00000003440	pcbp3	57	43.636	ENSAMXG00000005525	fubp1	56	43.636
ENSAMXG00000003440	pcbp3	93	31.884	ENSAMXG00000007453	igf2bp3	60	31.884
ENSAMXG00000003440	pcbp3	91	32.558	ENSAMXG00000033604	nova2	85	32.558
ENSAMXG00000003440	pcbp3	63	39.706	ENSAMXG00000006702	nova1	87	32.558
ENSAMXG00000003440	pcbp3	86	32.192	ENSAMXG00000015877	igf2bp1	57	31.387
ENSAMXG00000003440	pcbp3	60	41.270	ENSAMXG00000008318	fubp3	60	41.270
ENSAMXG00000003440	pcbp3	94	65.043	ENSAMXG00000001760	zgc:110045	73	65.043
ENSAMXG00000003440	pcbp3	61	38.235	ENSAMXG00000036582	khsrp	56	38.235
ENSAMXG00000003440	pcbp3	94	71.772	ENSAMXG00000016858	-	96	71.772
ENSAMXG00000003440	pcbp3	91	35.338	ENSAMXG00000032347	igf2bp2b	59	35.338
ENSAMXG00000003440	pcbp3	72	52.055	ENSAMXG00000006660	hnrpkl	56	52.055
ENSAMXG00000003440	pcbp3	71	51.429	ENSAMXG00000011326	hnrnpk	56	51.429
ENSAMXG00000003440	pcbp3	94	74.924	ENSAMXG00000037819	pcbp2	96	74.924
ENSAMXG00000003440	pcbp3	97	64.857	ENSAMXG00000033125	pcbp4	74	64.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000003440	pcbp3	100	92.571	ENSAPOG00000016582	-	100	92.571	Acanthochromis_polyacanthus
ENSAMXG00000003440	pcbp3	95	88.589	ENSAPOG00000020003	pcbp3	86	88.589	Acanthochromis_polyacanthus
ENSAMXG00000003440	pcbp3	93	88.462	ENSAMEG00000001697	-	96	88.462	Ailuropoda_melanoleuca
ENSAMXG00000003440	pcbp3	95	90.419	ENSACIG00000002739	-	97	90.419	Amphilophus_citrinellus
ENSAMXG00000003440	pcbp3	100	94.571	ENSACIG00000010933	pcbp3	100	94.571	Amphilophus_citrinellus
ENSAMXG00000003440	pcbp3	95	90.991	ENSAOCG00000008592	-	98	90.991	Amphiprion_ocellaris
ENSAMXG00000003440	pcbp3	91	87.255	ENSAOCG00000007806	-	97	87.255	Amphiprion_ocellaris
ENSAMXG00000003440	pcbp3	95	89.820	ENSAPEG00000005209	-	97	89.820	Amphiprion_percula
ENSAMXG00000003440	pcbp3	100	96.875	ENSAPEG00000008011	pcbp3	100	96.875	Amphiprion_percula
ENSAMXG00000003440	pcbp3	95	94.895	ENSATEG00000015787	-	100	94.895	Anabas_testudineus
ENSAMXG00000003440	pcbp3	95	89.521	ENSATEG00000009833	-	97	89.521	Anabas_testudineus
ENSAMXG00000003440	pcbp3	99	78.976	ENSAPLG00000008951	-	83	78.976	Anas_platyrhynchos
ENSAMXG00000003440	pcbp3	93	86.804	ENSAPLG00000002975	-	95	86.804	Anas_platyrhynchos
ENSAMXG00000003440	pcbp3	93	91.931	ENSACAG00000004607	-	96	91.931	Anolis_carolinensis
ENSAMXG00000003440	pcbp3	93	88.073	ENSACAG00000009819	-	95	88.073	Anolis_carolinensis
ENSAMXG00000003440	pcbp3	91	88.930	ENSANAG00000030702	-	96	88.930	Aotus_nancymaae
ENSAMXG00000003440	pcbp3	100	92.000	ENSACLG00000003801	-	100	92.000	Astatotilapia_calliptera
ENSAMXG00000003440	pcbp3	100	96.023	ENSACLG00000011835	pcbp3	100	96.023	Astatotilapia_calliptera
ENSAMXG00000003440	pcbp3	89	88.492	ENSCAFG00020019472	-	81	88.492	Canis_lupus_dingo
ENSAMXG00000003440	pcbp3	93	90.520	ENSCSAG00000007440	-	87	90.520	Chlorocebus_sabaeus
ENSAMXG00000003440	pcbp3	98	87.172	ENSCPBG00000012151	-	95	87.172	Chrysemys_picta_bellii
ENSAMXG00000003440	pcbp3	98	88.152	ENSCPBG00000000733	-	72	88.152	Chrysemys_picta_bellii
ENSAMXG00000003440	pcbp3	95	87.387	ENSCSEG00000000822	pcbp3	99	87.387	Cynoglossus_semilaevis
ENSAMXG00000003440	pcbp3	73	95.361	ENSCSEG00000016984	-	77	95.361	Cynoglossus_semilaevis
ENSAMXG00000003440	pcbp3	100	92.000	ENSCVAG00000005262	-	100	92.000	Cyprinodon_variegatus
ENSAMXG00000003440	pcbp3	100	96.591	ENSCVAG00000014482	pcbp3	100	96.591	Cyprinodon_variegatus
ENSAMXG00000003440	pcbp3	100	99.429	ENSDARG00000054378	pcbp3	100	99.429	Danio_rerio
ENSAMXG00000003440	pcbp3	93	77.064	ENSETEG00000015988	-	95	77.064	Echinops_telfairi
ENSAMXG00000003440	pcbp3	91	67.808	ENSEBUG00000016192	pcbp3	99	67.808	Eptatretus_burgeri
ENSAMXG00000003440	pcbp3	96	74.631	ENSEBUG00000007485	-	94	73.600	Eptatretus_burgeri
ENSAMXG00000003440	pcbp3	91	64.074	ENSEBUG00000005495	pcbp3	74	64.074	Eptatretus_burgeri
ENSAMXG00000003440	pcbp3	100	96.884	ENSELUG00000003521	pcbp3	100	96.884	Esox_lucius
ENSAMXG00000003440	pcbp3	100	92.286	ENSELUG00000001560	-	100	84.298	Esox_lucius
ENSAMXG00000003440	pcbp3	93	90.214	ENSFALG00000003949	-	95	90.214	Ficedula_albicollis
ENSAMXG00000003440	pcbp3	99	79.245	ENSFALG00000004411	-	78	79.245	Ficedula_albicollis
ENSAMXG00000003440	pcbp3	95	89.222	ENSFHEG00000006539	-	97	89.222	Fundulus_heteroclitus
ENSAMXG00000003440	pcbp3	97	86.765	ENSFHEG00000016615	pcbp3	97	86.765	Fundulus_heteroclitus
ENSAMXG00000003440	pcbp3	95	76.404	ENSGMOG00000011992	pcbp3	96	76.404	Gadus_morhua
ENSAMXG00000003440	pcbp3	95	67.705	ENSGMOG00000008611	-	100	67.705	Gadus_morhua
ENSAMXG00000003440	pcbp3	93	89.337	ENSGALG00000004394	-	96	89.337	Gallus_gallus
ENSAMXG00000003440	pcbp3	93	88.308	ENSGALG00000013155	-	98	85.321	Gallus_gallus
ENSAMXG00000003440	pcbp3	100	92.000	ENSGAFG00000010274	-	100	92.000	Gambusia_affinis
ENSAMXG00000003440	pcbp3	95	93.093	ENSGAFG00000011430	pcbp3	96	93.093	Gambusia_affinis
ENSAMXG00000003440	pcbp3	96	85.593	ENSGACG00000002266	-	97	85.593	Gasterosteus_aculeatus
ENSAMXG00000003440	pcbp3	95	83.003	ENSGACG00000014955	-	97	83.003	Gasterosteus_aculeatus
ENSAMXG00000003440	pcbp3	78	88.263	ENSGAGG00000006956	-	86	88.263	Gopherus_agassizii
ENSAMXG00000003440	pcbp3	94	82.759	ENSGAGG00000000271	-	100	82.414	Gopherus_agassizii
ENSAMXG00000003440	pcbp3	100	96.023	ENSHBUG00000010697	pcbp3	100	96.023	Haplochromis_burtoni
ENSAMXG00000003440	pcbp3	100	92.000	ENSHBUG00000021782	-	100	92.000	Haplochromis_burtoni
ENSAMXG00000003440	pcbp3	100	96.866	ENSHCOG00000017868	pcbp3	100	96.866	Hippocampus_comes
ENSAMXG00000003440	pcbp3	95	86.826	ENSHCOG00000006067	-	97	86.826	Hippocampus_comes
ENSAMXG00000003440	pcbp3	95	98.802	ENSIPUG00000006238	pcbp3	97	98.802	Ictalurus_punctatus
ENSAMXG00000003440	pcbp3	100	91.143	ENSKMAG00000018530	-	100	91.143	Kryptolebias_marmoratus
ENSAMXG00000003440	pcbp3	100	96.875	ENSKMAG00000003046	pcbp3	100	96.875	Kryptolebias_marmoratus
ENSAMXG00000003440	pcbp3	96	87.500	ENSLBEG00000006201	pcbp3	96	87.500	Labrus_bergylta
ENSAMXG00000003440	pcbp3	100	78.857	ENSLBEG00000006542	-	100	80.857	Labrus_bergylta
ENSAMXG00000003440	pcbp3	98	78.846	ENSLACG00000010804	zgc:110045	77	78.846	Latimeria_chalumnae
ENSAMXG00000003440	pcbp3	97	87.328	ENSLACG00000010386	pcbp3	77	87.328	Latimeria_chalumnae
ENSAMXG00000003440	pcbp3	93	98.165	ENSLOCG00000009369	pcbp3	96	98.165	Lepisosteus_oculatus
ENSAMXG00000003440	pcbp3	95	87.311	ENSLOCG00000005058	zgc:110045	80	87.311	Lepisosteus_oculatus
ENSAMXG00000003440	pcbp3	95	88.288	ENSMAMG00000022336	pcbp3	93	88.288	Mastacembelus_armatus
ENSAMXG00000003440	pcbp3	95	88.323	ENSMAMG00000011620	-	97	88.323	Mastacembelus_armatus
ENSAMXG00000003440	pcbp3	100	94.286	ENSMZEG00005008993	pcbp3	100	94.286	Maylandia_zebra
ENSAMXG00000003440	pcbp3	100	88.286	ENSMZEG00005014882	-	100	88.385	Maylandia_zebra
ENSAMXG00000003440	pcbp3	94	81.609	ENSMGAG00000001883	-	96	81.609	Meleagris_gallopavo
ENSAMXG00000003440	pcbp3	98	79.292	ENSMGAG00000006794	-	77	79.292	Meleagris_gallopavo
ENSAMXG00000003440	pcbp3	95	88.922	ENSMMOG00000005216	-	97	88.922	Mola_mola
ENSAMXG00000003440	pcbp3	95	87.463	ENSMMOG00000000730	pcbp3	88	87.463	Mola_mola
ENSAMXG00000003440	pcbp3	71	88.318	ENSMODG00000027884	-	93	88.318	Monodelphis_domestica
ENSAMXG00000003440	pcbp3	100	94.587	ENSMALG00000000691	pcbp3	100	94.587	Monopterus_albus
ENSAMXG00000003440	pcbp3	93	78.963	ENSMPUG00000001779	-	88	78.963	Mustela_putorius_furo
ENSAMXG00000003440	pcbp3	100	94.286	ENSNBRG00000016409	-	100	94.286	Neolamprologus_brichardi
ENSAMXG00000003440	pcbp3	100	90.730	ENSNBRG00000016714	-	100	90.730	Neolamprologus_brichardi
ENSAMXG00000003440	pcbp3	93	88.696	ENSOPRG00000003431	-	99	88.696	Ochotona_princeps
ENSAMXG00000003440	pcbp3	95	91.218	ENSONIG00000012122	-	98	91.218	Oreochromis_niloticus
ENSAMXG00000003440	pcbp3	95	91.317	ENSONIG00000004611	-	97	91.317	Oreochromis_niloticus
ENSAMXG00000003440	pcbp3	93	89.908	ENSOCUG00000002696	-	87	89.908	Oryctolagus_cuniculus
ENSAMXG00000003440	pcbp3	99	91.404	ENSORLG00000022739	-	99	91.404	Oryzias_latipes
ENSAMXG00000003440	pcbp3	95	90.991	ENSORLG00000000059	pcbp3	100	90.991	Oryzias_latipes
ENSAMXG00000003440	pcbp3	99	91.117	ENSORLG00020006124	-	99	91.117	Oryzias_latipes_hni
ENSAMXG00000003440	pcbp3	95	90.991	ENSORLG00020012671	pcbp3	97	90.991	Oryzias_latipes_hni
ENSAMXG00000003440	pcbp3	99	91.404	ENSORLG00015008051	-	99	91.404	Oryzias_latipes_hsok
ENSAMXG00000003440	pcbp3	95	90.991	ENSORLG00015000429	pcbp3	97	90.991	Oryzias_latipes_hsok
ENSAMXG00000003440	pcbp3	95	91.018	ENSOMEG00000020162	-	97	91.018	Oryzias_melastigma
ENSAMXG00000003440	pcbp3	87	89.145	ENSOMEG00000020811	pcbp3	97	89.145	Oryzias_melastigma
ENSAMXG00000003440	pcbp3	93	84.703	ENSOGAG00000008044	-	96	84.703	Otolemur_garnettii
ENSAMXG00000003440	pcbp3	77	80.000	ENSPKIG00000020913	-	91	80.000	Paramormyrops_kingsleyae
ENSAMXG00000003440	pcbp3	100	91.429	ENSPKIG00000019329	pcbp3	100	91.429	Paramormyrops_kingsleyae
ENSAMXG00000003440	pcbp3	93	77.907	ENSPSIG00000014970	-	95	78.488	Pelodiscus_sinensis
ENSAMXG00000003440	pcbp3	94	82.759	ENSPSIG00000008350	-	72	82.759	Pelodiscus_sinensis
ENSAMXG00000003440	pcbp3	100	97.143	ENSPMGG00000022383	pcbp3	100	97.143	Periophthalmus_magnuspinnatus
ENSAMXG00000003440	pcbp3	72	88.021	ENSPMAG00000004637	-	99	88.021	Petromyzon_marinus
ENSAMXG00000003440	pcbp3	97	68.513	ENSPMAG00000004551	pcbp3	91	68.513	Petromyzon_marinus
ENSAMXG00000003440	pcbp3	93	97.248	ENSPCIG00000028092	-	96	97.248	Phascolarctos_cinereus
ENSAMXG00000003440	pcbp3	94	85.714	ENSPLAG00000004074	-	89	85.714	Poecilia_latipinna
ENSAMXG00000003440	pcbp3	100	81.750	ENSPLAG00000011449	pcbp3	100	81.750	Poecilia_latipinna
ENSAMXG00000003440	pcbp3	100	96.045	ENSPMEG00000021239	pcbp3	100	96.045	Poecilia_mexicana
ENSAMXG00000003440	pcbp3	100	89.714	ENSPMEG00000006653	-	100	89.714	Poecilia_mexicana
ENSAMXG00000003440	pcbp3	95	88.922	ENSPREG00000020585	-	97	88.922	Poecilia_reticulata
ENSAMXG00000003440	pcbp3	95	86.567	ENSPREG00000015736	pcbp3	99	86.567	Poecilia_reticulata
ENSAMXG00000003440	pcbp3	95	88.288	ENSPNYG00000012326	pcbp3	95	88.288	Pundamilia_nyererei
ENSAMXG00000003440	pcbp3	95	88.922	ENSPNYG00000013205	-	97	88.922	Pundamilia_nyererei
ENSAMXG00000003440	pcbp3	100	95.157	ENSPNAG00000008541	-	100	95.157	Pygocentrus_nattereri
ENSAMXG00000003440	pcbp3	95	92.515	ENSPNAG00000015104	pcbp3	97	92.515	Pygocentrus_nattereri
ENSAMXG00000003440	pcbp3	93	90.520	ENSRNOG00000001245	Pcbp3	95	90.520	Rattus_norvegicus
ENSAMXG00000003440	pcbp3	93	80.780	ENSRBIG00000028177	-	96	80.780	Rhinopithecus_bieti
ENSAMXG00000003440	pcbp3	93	85.714	ENSSHAG00000007890	-	96	85.014	Sarcophilus_harrisii
ENSAMXG00000003440	pcbp3	100	92.000	ENSSFOG00015010205	pcbp3	100	96.697	Scleropages_formosus
ENSAMXG00000003440	pcbp3	93	79.385	ENSSFOG00015007118	-	93	79.385	Scleropages_formosus
ENSAMXG00000003440	pcbp3	100	96.857	ENSSFOG00015014706	pcbp3	100	96.857	Scleropages_formosus
ENSAMXG00000003440	pcbp3	100	91.714	ENSSMAG00000003135	-	100	91.714	Scophthalmus_maximus
ENSAMXG00000003440	pcbp3	95	88.589	ENSSMAG00000011929	pcbp3	97	88.589	Scophthalmus_maximus
ENSAMXG00000003440	pcbp3	95	94.030	ENSSDUG00000011608	pcbp3	99	94.030	Seriola_dumerili
ENSAMXG00000003440	pcbp3	100	90.857	ENSSDUG00000008502	-	100	90.857	Seriola_dumerili
ENSAMXG00000003440	pcbp3	100	92.571	ENSSLDG00000020161	-	100	92.571	Seriola_lalandi_dorsalis
ENSAMXG00000003440	pcbp3	95	94.030	ENSSLDG00000008518	pcbp3	99	94.030	Seriola_lalandi_dorsalis
ENSAMXG00000003440	pcbp3	91	86.505	ENSSPUG00000013214	-	91	86.505	Sphenodon_punctatus
ENSAMXG00000003440	pcbp3	91	87.255	ENSSPAG00000004190	-	97	87.255	Stegastes_partitus
ENSAMXG00000003440	pcbp3	100	84.571	ENSSPAG00000023341	-	100	84.571	Stegastes_partitus
ENSAMXG00000003440	pcbp3	95	83.988	ENSTGUG00000008158	-	97	83.988	Taeniopygia_guttata
ENSAMXG00000003440	pcbp3	93	82.133	ENSTGUG00000003316	-	96	82.133	Taeniopygia_guttata
ENSAMXG00000003440	pcbp3	100	91.714	ENSTRUG00000013604	pcbp3	100	91.714	Takifugu_rubripes
ENSAMXG00000003440	pcbp3	86	91.030	ENSTRUG00000006280	-	89	91.030	Takifugu_rubripes
ENSAMXG00000003440	pcbp3	93	89.337	ENSTTRG00000015075	-	96	89.337	Tursiops_truncatus
ENSAMXG00000003440	pcbp3	93	83.573	ENSXETG00000011483	pcbp1	96	83.573	Xenopus_tropicalis
ENSAMXG00000003440	pcbp3	95	77.904	ENSXETG00000010491	pcbp2	77	77.904	Xenopus_tropicalis
ENSAMXG00000003440	pcbp3	100	96.045	ENSXCOG00000020481	pcbp3	100	96.045	Xiphophorus_couchianus
ENSAMXG00000003440	pcbp3	100	92.286	ENSXMAG00000028711	-	100	92.286	Xiphophorus_maculatus
ENSAMXG00000003440	pcbp3	100	96.875	ENSXMAG00000008175	pcbp3	100	96.875	Xiphophorus_maculatus