EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000003899 (Gene tree)
Gene ID: 103032884
Gene Symbol: mrto4
Alias: fb71a02|wu:fb71a02|zgc:110388
Full Name: MRT4 homolog%2C ribosome maturation factor
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 5619 bases
Position: chr22:3884927-3890545
Accession: 103032884
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000003992	Ribosomal_L10	PF00466.20	6.3e-22	1	1
ENSAMXP00000055017	Ribosomal_L10	PF00466.20	7e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000053637	-	741	-	ENSAMXP00000055017	246 (aa)	-	-
ENSAMXT00000003992	-	723	XM_007251461	ENSAMXP00000003992	240 (aa)	XP_007251523	W5K8T1

Gene Model

Click here to download ENSAMXG00000003899's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000003899's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000003899	mrto4	92	78.733	ENSG00000053372	MRTO4	92	78.733	Homo_sapiens
ENSAMXG00000003899	mrto4	66	79.245	ENSAPOG00000013290	-	84	77.439	Acanthochromis_polyacanthus
ENSAMXG00000003899	mrto4	93	82.432	ENSAPOG00000011387	mrto4	95	81.057	Acanthochromis_polyacanthus
ENSAMXG00000003899	mrto4	66	79.245	ENSAPOG00000013189	-	84	77.439	Acanthochromis_polyacanthus
ENSAMXG00000003899	mrto4	92	77.828	ENSAMEG00000003014	MRTO4	92	77.828	Ailuropoda_melanoleuca
ENSAMXG00000003899	mrto4	91	50.446	ENSAMEG00000014981	-	100	50.446	Ailuropoda_melanoleuca
ENSAMXG00000003899	mrto4	93	85.135	ENSACIG00000008213	mrto4	95	83.700	Amphilophus_citrinellus
ENSAMXG00000003899	mrto4	88	82.547	ENSAOCG00000006483	mrto4	90	78.761	Amphiprion_ocellaris
ENSAMXG00000003899	mrto4	98	80.000	ENSAPEG00000004866	mrto4	94	82.353	Amphiprion_percula
ENSAMXG00000003899	mrto4	93	86.036	ENSATEG00000024976	mrto4	95	84.581	Anabas_testudineus
ENSAMXG00000003899	mrto4	65	76.129	ENSAPLG00000013861	MRTO4	88	76.129	Anas_platyrhynchos
ENSAMXG00000003899	mrto4	92	78.281	ENSANAG00000029674	MRTO4	92	78.281	Aotus_nancymaae
ENSAMXG00000003899	mrto4	93	86.486	ENSACLG00000016523	mrto4	95	85.022	Astatotilapia_calliptera
ENSAMXG00000003899	mrto4	92	79.186	ENSBTAG00000011951	MRTO4	92	79.186	Bos_taurus
ENSAMXG00000003899	mrto4	98	75.630	ENSCJAG00000006812	MRTO4	92	78.281	Callithrix_jacchus
ENSAMXG00000003899	mrto4	92	68.778	ENSCAFG00000000532	-	92	68.778	Canis_familiaris
ENSAMXG00000003899	mrto4	91	54.338	ENSCAFG00000009080	-	100	54.338	Canis_familiaris
ENSAMXG00000003899	mrto4	92	76.923	ENSCAFG00000015189	-	92	76.923	Canis_familiaris
ENSAMXG00000003899	mrto4	92	76.923	ENSCAFG00020008173	MRTO4	92	76.923	Canis_lupus_dingo
ENSAMXG00000003899	mrto4	88	57.547	ENSCHIG00000010639	-	91	57.547	Capra_hircus
ENSAMXG00000003899	mrto4	92	79.186	ENSCHIG00000014751	MRTO4	92	79.186	Capra_hircus
ENSAMXG00000003899	mrto4	92	76.923	ENSTSYG00000013413	MRTO4	92	76.923	Carlito_syrichta
ENSAMXG00000003899	mrto4	83	73.232	ENSCAPG00000012648	MRTO4	87	73.232	Cavia_aperea
ENSAMXG00000003899	mrto4	93	77.477	ENSCPOG00000033237	MRTO4	92	77.477	Cavia_porcellus
ENSAMXG00000003899	mrto4	92	78.281	ENSCCAG00000036206	MRTO4	92	78.281	Cebus_capucinus
ENSAMXG00000003899	mrto4	97	66.379	ENSCATG00000030492	-	92	69.767	Cercocebus_atys
ENSAMXG00000003899	mrto4	93	76.126	ENSCLAG00000001997	MRTO4	92	76.126	Chinchilla_lanigera
ENSAMXG00000003899	mrto4	91	78.082	ENSCSAG00000000876	-	92	78.082	Chlorocebus_sabaeus
ENSAMXG00000003899	mrto4	92	76.471	ENSCSAG00000018596	-	92	76.471	Chlorocebus_sabaeus
ENSAMXG00000003899	mrto4	91	80.734	ENSCPBG00000023562	MRTO4	90	80.734	Chrysemys_picta_bellii
ENSAMXG00000003899	mrto4	93	61.261	ENSCSAVG00000011770	-	79	61.261	Ciona_savignyi
ENSAMXG00000003899	mrto4	92	78.281	ENSCANG00000002395	-	92	78.281	Colobus_angolensis_palliatus
ENSAMXG00000003899	mrto4	92	71.493	ENSCANG00000005353	-	92	71.493	Colobus_angolensis_palliatus
ENSAMXG00000003899	mrto4	92	78.733	ENSCGRG00001005758	-	92	78.733	Cricetulus_griseus_chok1gshd
ENSAMXG00000003899	mrto4	97	70.213	ENSCGRG00001001286	-	98	70.000	Cricetulus_griseus_chok1gshd
ENSAMXG00000003899	mrto4	92	76.471	ENSCGRG00000010649	-	92	76.471	Cricetulus_griseus_crigri
ENSAMXG00000003899	mrto4	97	70.213	ENSCGRG00000001527	-	98	70.000	Cricetulus_griseus_crigri
ENSAMXG00000003899	mrto4	92	83.636	ENSCSEG00000021629	mrto4	95	81.938	Cynoglossus_semilaevis
ENSAMXG00000003899	mrto4	90	85.648	ENSCVAG00000012249	mrto4	94	83.784	Cyprinodon_variegatus
ENSAMXG00000003899	mrto4	94	89.381	ENSDARG00000007130	mrto4	93	89.381	Danio_rerio
ENSAMXG00000003899	mrto4	92	78.733	ENSDNOG00000010119	-	92	78.733	Dasypus_novemcinctus
ENSAMXG00000003899	mrto4	87	75.962	ENSDNOG00000030871	-	87	75.962	Dasypus_novemcinctus
ENSAMXG00000003899	mrto4	95	57.627	ENSDNOG00000045395	-	90	59.545	Dasypus_novemcinctus
ENSAMXG00000003899	mrto4	92	75.566	ENSDORG00000025382	Mrto4	92	75.566	Dipodomys_ordii
ENSAMXG00000003899	mrto4	100	73.750	ENSETEG00000001675	MRTO4	92	77.027	Echinops_telfairi
ENSAMXG00000003899	mrto4	93	77.477	ENSEASG00005014967	MRTO4	92	77.477	Equus_asinus_asinus
ENSAMXG00000003899	mrto4	93	77.027	ENSECAG00000012598	MRTO4	92	77.027	Equus_caballus
ENSAMXG00000003899	mrto4	88	60.377	ENSEEUG00000013520	MRTO4	93	60.377	Erinaceus_europaeus
ENSAMXG00000003899	mrto4	99	79.832	ENSELUG00000011152	mrto4	93	84.234	Esox_lucius
ENSAMXG00000003899	mrto4	98	74.790	ENSFCAG00000008771	MRTO4	93	78.281	Felis_catus
ENSAMXG00000003899	mrto4	91	74.771	ENSFALG00000010619	MRTO4	94	72.889	Ficedula_albicollis
ENSAMXG00000003899	mrto4	93	77.027	ENSFDAG00000013300	MRTO4	92	77.027	Fukomys_damarensis
ENSAMXG00000003899	mrto4	91	83.945	ENSFHEG00000022920	mrto4	94	82.883	Fundulus_heteroclitus
ENSAMXG00000003899	mrto4	89	84.038	ENSGMOG00000001422	mrto4	97	81.696	Gadus_morhua
ENSAMXG00000003899	mrto4	92	77.273	ENSGALG00000003991	MRTO4	96	76.652	Gallus_gallus
ENSAMXG00000003899	mrto4	92	84.091	ENSGAFG00000012570	mrto4	94	83.784	Gambusia_affinis
ENSAMXG00000003899	mrto4	93	81.982	ENSGACG00000001672	mrto4	96	80.617	Gasterosteus_aculeatus
ENSAMXG00000003899	mrto4	87	79.904	ENSGAGG00000012997	MRTO4	88	79.904	Gopherus_agassizii
ENSAMXG00000003899	mrto4	90	63.721	ENSGGOG00000042625	-	98	60.793	Gorilla_gorilla
ENSAMXG00000003899	mrto4	88	55.924	ENSGGOG00000036991	-	84	55.924	Gorilla_gorilla
ENSAMXG00000003899	mrto4	92	78.733	ENSGGOG00000000533	MRTO4	92	78.733	Gorilla_gorilla
ENSAMXG00000003899	mrto4	93	86.486	ENSHBUG00000009670	mrto4	95	85.022	Haplochromis_burtoni
ENSAMXG00000003899	mrto4	93	76.577	ENSHGLG00000012157	MRTO4	93	76.577	Heterocephalus_glaber_female
ENSAMXG00000003899	mrto4	93	76.577	ENSHGLG00100014484	MRTO4	93	76.577	Heterocephalus_glaber_male
ENSAMXG00000003899	mrto4	98	80.426	ENSHCOG00000019894	mrto4	96	81.938	Hippocampus_comes
ENSAMXG00000003899	mrto4	93	90.583	ENSIPUG00000002957	mrto4	93	90.583	Ictalurus_punctatus
ENSAMXG00000003899	mrto4	92	76.923	ENSSTOG00000028112	MRTO4	92	76.923	Ictidomys_tridecemlineatus
ENSAMXG00000003899	mrto4	92	74.775	ENSJJAG00000017998	Mrto4	93	74.775	Jaculus_jaculus
ENSAMXG00000003899	mrto4	92	83.182	ENSKMAG00000010148	mrto4	93	83.182	Kryptolebias_marmoratus
ENSAMXG00000003899	mrto4	92	87.727	ENSLBEG00000025010	mrto4	97	85.903	Labrus_bergylta
ENSAMXG00000003899	mrto4	93	80.717	ENSLACG00000019155	MRTO4	95	80.000	Latimeria_chalumnae
ENSAMXG00000003899	mrto4	90	84.259	ENSLOCG00000004468	mrto4	92	81.498	Lepisosteus_oculatus
ENSAMXG00000003899	mrto4	92	79.638	ENSLAFG00000010416	MRTO4	92	79.638	Loxodonta_africana
ENSAMXG00000003899	mrto4	92	77.828	ENSMFAG00000033225	-	92	77.828	Macaca_fascicularis
ENSAMXG00000003899	mrto4	92	77.828	ENSMMUG00000038335	MRTO4	92	77.828	Macaca_mulatta
ENSAMXG00000003899	mrto4	92	59.276	ENSMMUG00000044851	-	91	59.276	Macaca_mulatta
ENSAMXG00000003899	mrto4	92	77.828	ENSMNEG00000032783	-	92	77.828	Macaca_nemestrina
ENSAMXG00000003899	mrto4	92	77.828	ENSMLEG00000023273	-	92	77.828	Mandrillus_leucophaeus
ENSAMXG00000003899	mrto4	93	85.135	ENSMAMG00000014839	mrto4	93	85.135	Mastacembelus_armatus
ENSAMXG00000003899	mrto4	93	86.486	ENSMZEG00005013929	mrto4	95	85.022	Maylandia_zebra
ENSAMXG00000003899	mrto4	91	77.982	ENSMGAG00000005361	MRTO4	95	76.211	Meleagris_gallopavo
ENSAMXG00000003899	mrto4	92	78.281	ENSMAUG00000019627	-	92	78.281	Mesocricetus_auratus
ENSAMXG00000003899	mrto4	85	68.293	ENSMICG00000033640	-	100	68.293	Microcebus_murinus
ENSAMXG00000003899	mrto4	92	76.923	ENSMICG00000004019	MRTO4	92	76.923	Microcebus_murinus
ENSAMXG00000003899	mrto4	73	74.713	ENSMOCG00000018413	Mrto4	91	74.713	Microtus_ochrogaster
ENSAMXG00000003899	mrto4	94	81.416	ENSMMOG00000010735	mrto4	95	81.166	Mola_mola
ENSAMXG00000003899	mrto4	92	79.186	ENSMODG00000015874	MRTO4	94	77.533	Monodelphis_domestica
ENSAMXG00000003899	mrto4	92	85.455	ENSMALG00000007769	mrto4	100	84.305	Monopterus_albus
ENSAMXG00000003899	mrto4	92	78.733	MGP_CAROLIEiJ_G0026711	Mrto4	92	78.733	Mus_caroli
ENSAMXG00000003899	mrto4	92	78.733	ENSMUSG00000028741	Mrto4	100	81.967	Mus_musculus
ENSAMXG00000003899	mrto4	92	78.281	MGP_PahariEiJ_G0029042	Mrto4	92	78.281	Mus_pahari
ENSAMXG00000003899	mrto4	92	78.733	MGP_SPRETEiJ_G0027691	Mrto4	92	78.733	Mus_spretus
ENSAMXG00000003899	mrto4	92	76.923	ENSMPUG00000016181	MRTO4	92	76.923	Mustela_putorius_furo
ENSAMXG00000003899	mrto4	92	77.376	ENSMLUG00000025001	-	92	77.376	Myotis_lucifugus
ENSAMXG00000003899	mrto4	92	79.186	ENSMLUG00000001566	-	92	79.186	Myotis_lucifugus
ENSAMXG00000003899	mrto4	99	73.418	ENSNGAG00000011660	Mrto4	92	77.376	Nannospalax_galili
ENSAMXG00000003899	mrto4	93	86.036	ENSNBRG00000021435	mrto4	95	84.581	Neolamprologus_brichardi
ENSAMXG00000003899	mrto4	99	68.354	ENSNLEG00000018006	-	93	71.946	Nomascus_leucogenys
ENSAMXG00000003899	mrto4	92	69.683	ENSNLEG00000027896	-	92	69.683	Nomascus_leucogenys
ENSAMXG00000003899	mrto4	83	62.255	ENSNLEG00000034965	-	85	74.051	Nomascus_leucogenys
ENSAMXG00000003899	mrto4	68	79.878	ENSMEUG00000000027	MRTO4	100	79.878	Notamacropus_eugenii
ENSAMXG00000003899	mrto4	92	78.281	ENSOPRG00000012746	MRTO4	93	78.281	Ochotona_princeps
ENSAMXG00000003899	mrto4	93	76.577	ENSODEG00000019157	-	92	76.577	Octodon_degus
ENSAMXG00000003899	mrto4	93	71.171	ENSODEG00000014387	-	92	71.171	Octodon_degus
ENSAMXG00000003899	mrto4	93	66.216	ENSODEG00000014016	-	81	66.216	Octodon_degus
ENSAMXG00000003899	mrto4	93	72.072	ENSODEG00000011537	-	92	72.072	Octodon_degus
ENSAMXG00000003899	mrto4	93	77.477	ENSODEG00000015379	-	92	77.477	Octodon_degus
ENSAMXG00000003899	mrto4	93	86.036	ENSONIG00000014318	mrto4	95	84.581	Oreochromis_niloticus
ENSAMXG00000003899	mrto4	93	72.197	ENSOANG00000015345	MRTO4	92	72.072	Ornithorhynchus_anatinus
ENSAMXG00000003899	mrto4	99	73.640	ENSOCUG00000000274	MRTO4	92	77.376	Oryctolagus_cuniculus
ENSAMXG00000003899	mrto4	92	84.545	ENSORLG00000027922	mrto4	95	82.819	Oryzias_latipes
ENSAMXG00000003899	mrto4	92	84.545	ENSORLG00020019412	mrto4	95	82.819	Oryzias_latipes_hni
ENSAMXG00000003899	mrto4	92	84.545	ENSORLG00015015309	mrto4	95	82.819	Oryzias_latipes_hsok
ENSAMXG00000003899	mrto4	92	84.545	ENSOMEG00000021110	mrto4	96	82.819	Oryzias_melastigma
ENSAMXG00000003899	mrto4	92	77.828	ENSOGAG00000010713	-	92	77.828	Otolemur_garnettii
ENSAMXG00000003899	mrto4	88	56.132	ENSOGAG00000027996	-	87	56.132	Otolemur_garnettii
ENSAMXG00000003899	mrto4	92	55.204	ENSPPAG00000039572	-	91	55.204	Pan_paniscus
ENSAMXG00000003899	mrto4	92	78.281	ENSPPAG00000043731	MRTO4	92	78.281	Pan_paniscus
ENSAMXG00000003899	mrto4	98	73.529	ENSPPRG00000024765	MRTO4	93	76.923	Panthera_pardus
ENSAMXG00000003899	mrto4	98	74.790	ENSPTIG00000016208	MRTO4	93	78.281	Panthera_tigris_altaica
ENSAMXG00000003899	mrto4	92	78.733	ENSPTRG00000000262	MRTO4	92	78.733	Pan_troglodytes
ENSAMXG00000003899	mrto4	92	55.656	ENSPTRG00000046027	-	91	55.656	Pan_troglodytes
ENSAMXG00000003899	mrto4	91	72.018	ENSPANG00000011596	-	95	72.018	Papio_anubis
ENSAMXG00000003899	mrto4	92	68.778	ENSPANG00000017838	-	92	68.778	Papio_anubis
ENSAMXG00000003899	mrto4	89	84.977	ENSPKIG00000017917	mrto4	94	80.702	Paramormyrops_kingsleyae
ENSAMXG00000003899	mrto4	73	77.011	ENSPSIG00000015125	MRTO4	90	77.011	Pelodiscus_sinensis
ENSAMXG00000003899	mrto4	90	76.852	ENSPMGG00000013461	mrto4	92	75.225	Periophthalmus_magnuspinnatus
ENSAMXG00000003899	mrto4	92	78.281	ENSPEMG00000010459	-	92	78.281	Peromyscus_maniculatus_bairdii
ENSAMXG00000003899	mrto4	92	72.768	ENSPEMG00000023720	-	93	72.768	Peromyscus_maniculatus_bairdii
ENSAMXG00000003899	mrto4	100	74.167	ENSPCIG00000003652	MRTO4	93	77.093	Phascolarctos_cinereus
ENSAMXG00000003899	mrto4	92	85.455	ENSPFOG00000013266	mrto4	93	85.135	Poecilia_formosa
ENSAMXG00000003899	mrto4	92	85.455	ENSPLAG00000016285	mrto4	93	85.135	Poecilia_latipinna
ENSAMXG00000003899	mrto4	92	85.000	ENSPMEG00000003539	mrto4	94	84.685	Poecilia_mexicana
ENSAMXG00000003899	mrto4	92	84.091	ENSPREG00000006249	mrto4	94	83.784	Poecilia_reticulata
ENSAMXG00000003899	mrto4	92	78.733	ENSPPYG00000001795	MRTO4	92	78.733	Pongo_abelii
ENSAMXG00000003899	mrto4	92	70.588	ENSPCAG00000001458	MRTO4	92	70.588	Procavia_capensis
ENSAMXG00000003899	mrto4	99	71.967	ENSPCOG00000014182	MRTO4	92	76.471	Propithecus_coquereli
ENSAMXG00000003899	mrto4	92	77.376	ENSPVAG00000005775	MRTO4	92	77.376	Pteropus_vampyrus
ENSAMXG00000003899	mrto4	93	86.036	ENSPNYG00000018672	mrto4	95	84.581	Pundamilia_nyererei
ENSAMXG00000003899	mrto4	94	89.381	ENSPNAG00000027733	mrto4	95	89.381	Pygocentrus_nattereri
ENSAMXG00000003899	mrto4	73	74.713	ENSRNOG00000017979	Mrto4	90	74.713	Rattus_norvegicus
ENSAMXG00000003899	mrto4	80	69.948	ENSRBIG00000036159	-	91	69.948	Rhinopithecus_bieti
ENSAMXG00000003899	mrto4	92	65.158	ENSRBIG00000013434	-	92	65.158	Rhinopithecus_bieti
ENSAMXG00000003899	mrto4	92	77.376	ENSRBIG00000036806	-	92	77.376	Rhinopithecus_bieti
ENSAMXG00000003899	mrto4	92	73.303	ENSRROG00000037374	-	92	73.303	Rhinopithecus_roxellana
ENSAMXG00000003899	mrto4	92	77.376	ENSRROG00000042838	-	92	77.376	Rhinopithecus_roxellana
ENSAMXG00000003899	mrto4	92	76.923	ENSRROG00000011593	-	88	76.923	Rhinopithecus_roxellana
ENSAMXG00000003899	mrto4	92	78.281	ENSSBOG00000022924	MRTO4	92	78.281	Saimiri_boliviensis_boliviensis
ENSAMXG00000003899	mrto4	87	77.990	ENSSHAG00000008423	MRTO4	94	75.799	Sarcophilus_harrisii
ENSAMXG00000003899	mrto4	94	86.222	ENSSFOG00015006887	mrto4	95	86.222	Scleropages_formosus
ENSAMXG00000003899	mrto4	93	83.784	ENSSMAG00000014393	mrto4	93	83.784	Scophthalmus_maximus
ENSAMXG00000003899	mrto4	93	85.135	ENSSDUG00000015362	mrto4	93	85.135	Seriola_dumerili
ENSAMXG00000003899	mrto4	93	85.586	ENSSLDG00000015813	mrto4	93	85.586	Seriola_lalandi_dorsalis
ENSAMXG00000003899	mrto4	99	75.630	ENSSARG00000012700	MRTO4	90	78.440	Sorex_araneus
ENSAMXG00000003899	mrto4	98	78.903	ENSSPUG00000001110	MRTO4	92	81.651	Sphenodon_punctatus
ENSAMXG00000003899	mrto4	99	78.243	ENSSPAG00000007811	mrto4	95	80.617	Stegastes_partitus
ENSAMXG00000003899	mrto4	92	77.376	ENSSSCG00000034814	MRTO4	92	77.376	Sus_scrofa
ENSAMXG00000003899	mrto4	77	73.370	ENSTGUG00000016935	MRTO4	100	73.370	Taeniopygia_guttata
ENSAMXG00000003899	mrto4	93	82.432	ENSTRUG00000019838	mrto4	95	81.057	Takifugu_rubripes
ENSAMXG00000003899	mrto4	93	81.982	ENSTNIG00000014802	mrto4	95	80.617	Tetraodon_nigroviridis
ENSAMXG00000003899	mrto4	92	76.923	ENSTTRG00000014203	MRTO4	92	76.923	Tursiops_truncatus
ENSAMXG00000003899	mrto4	88	76.887	ENSUAMG00000026191	MRTO4	90	73.009	Ursus_americanus
ENSAMXG00000003899	mrto4	99	74.583	ENSUMAG00000018964	MRTO4	92	77.828	Ursus_maritimus
ENSAMXG00000003899	mrto4	92	76.923	ENSVVUG00000029432	MRTO4	92	76.923	Vulpes_vulpes
ENSAMXG00000003899	mrto4	90	77.778	ENSXETG00000020828	mrto4	94	75.664	Xenopus_tropicalis
ENSAMXG00000003899	mrto4	98	82.479	ENSXCOG00000013521	mrto4	95	85.135	Xiphophorus_couchianus