EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000004011 (Gene tree)
Gene ID: 103033140
Gene Symbol: srp72
Alias: wu:fi03d11
Full Name: signal recognition particle 72
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 11556 bases
Position: chr2:32784138-32795693
Accession: 103033140
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000004095	SRP72	PF08492.12	7.6e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000004095	-	4268	XM_007260329	ENSAMXP00000004095	665 (aa)	XP_007260391	W5K934

Gene Model

Click here to download ENSAMXG00000004011's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000004011's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000004011	srp72	97	77.489	ENSG00000174780	SRP72	97	77.370	Homo_sapiens
ENSAMXG00000004011	srp72	99	73.233	ENSAPOG00000019438	srp72	97	73.846	Acanthochromis_polyacanthus
ENSAMXG00000004011	srp72	96	77.916	ENSAMEG00000008469	SRP72	97	77.454	Ailuropoda_melanoleuca
ENSAMXG00000004011	srp72	100	82.563	ENSACIG00000000488	srp72	98	82.622	Amphilophus_citrinellus
ENSAMXG00000004011	srp72	100	83.683	ENSAOCG00000011256	srp72	98	84.533	Amphiprion_ocellaris
ENSAMXG00000004011	srp72	100	84.132	ENSAPEG00000001512	srp72	98	84.227	Amphiprion_percula
ENSAMXG00000004011	srp72	92	84.553	ENSATEG00000006781	srp72	99	84.416	Anabas_testudineus
ENSAMXG00000004011	srp72	99	77.744	ENSAPLG00000008751	SRP72	99	77.895	Anas_platyrhynchos
ENSAMXG00000004011	srp72	97	77.434	ENSACAG00000002381	SRP72	96	77.252	Anolis_carolinensis
ENSAMXG00000004011	srp72	95	77.638	ENSANAG00000020836	-	97	76.903	Aotus_nancymaae
ENSAMXG00000004011	srp72	100	83.408	ENSACLG00000014617	srp72	98	83.486	Astatotilapia_calliptera
ENSAMXG00000004011	srp72	97	76.417	ENSBTAG00000010593	SRP72	97	76.453	Bos_taurus
ENSAMXG00000004011	srp72	97	76.570	ENSCJAG00000017998	SRP72	97	77.165	Callithrix_jacchus
ENSAMXG00000004011	srp72	97	77.335	ENSCAFG00000002244	SRP72	97	77.370	Canis_familiaris
ENSAMXG00000004011	srp72	97	77.335	ENSCAFG00020027338	SRP72	96	77.993	Canis_lupus_dingo
ENSAMXG00000004011	srp72	97	75.076	ENSCHIG00000021465	SRP72	97	75.115	Capra_hircus
ENSAMXG00000004011	srp72	97	77.864	ENSTSYG00000010571	-	99	77.395	Carlito_syrichta
ENSAMXG00000004011	srp72	77	70.157	ENSCAPG00000016668	SRP72	93	65.289	Cavia_aperea
ENSAMXG00000004011	srp72	97	77.182	ENSCPOG00000000218	SRP72	97	77.064	Cavia_porcellus
ENSAMXG00000004011	srp72	95	77.795	ENSCCAG00000030683	-	94	77.795	Cebus_capucinus
ENSAMXG00000004011	srp72	98	75.153	ENSCCAG00000030830	-	97	75.077	Cebus_capucinus
ENSAMXG00000004011	srp72	98	61.656	ENSCATG00000045359	-	95	61.538	Cercocebus_atys
ENSAMXG00000004011	srp72	97	77.335	ENSCATG00000008072	SRP72	97	77.217	Cercocebus_atys
ENSAMXG00000004011	srp72	97	76.876	ENSCLAG00000003571	SRP72	97	76.911	Chinchilla_lanigera
ENSAMXG00000004011	srp72	97	73.394	ENSCSAG00000005079	SRP72	97	73.282	Chlorocebus_sabaeus
ENSAMXG00000004011	srp72	89	75.439	ENSCHOG00000013240	SRP72	89	75.439	Choloepus_hoffmanni
ENSAMXG00000004011	srp72	96	78.227	ENSCPBG00000015015	SRP72	97	78.407	Chrysemys_picta_bellii
ENSAMXG00000004011	srp72	96	41.416	ENSCING00000002417	-	95	42.169	Ciona_intestinalis
ENSAMXG00000004011	srp72	97	41.203	ENSCSAVG00000011288	-	95	42.057	Ciona_savignyi
ENSAMXG00000004011	srp72	98	53.976	ENSCANG00000037920	-	97	55.061	Colobus_angolensis_palliatus
ENSAMXG00000004011	srp72	97	77.335	ENSCANG00000041709	SRP72	97	77.217	Colobus_angolensis_palliatus
ENSAMXG00000004011	srp72	99	76.682	ENSCGRG00001013548	Srp72	99	76.831	Cricetulus_griseus_chok1gshd
ENSAMXG00000004011	srp72	95	77.129	ENSCGRG00000003013	Srp72	99	77.287	Cricetulus_griseus_crigri
ENSAMXG00000004011	srp72	100	83.259	ENSCSEG00000003616	srp72	98	83.180	Cynoglossus_semilaevis
ENSAMXG00000004011	srp72	92	83.607	ENSCVAG00000001520	srp72	100	83.607	Cyprinodon_variegatus
ENSAMXG00000004011	srp72	85	87.215	ENSDARG00000014139	srp72	97	86.897	Danio_rerio
ENSAMXG00000004011	srp72	97	73.047	ENSDNOG00000039012	SRP72	81	73.242	Dasypus_novemcinctus
ENSAMXG00000004011	srp72	97	77.209	ENSDORG00000000171	Srp72	97	76.687	Dipodomys_ordii
ENSAMXG00000004011	srp72	95	40.591	FBgn0038810	Srp72	96	40.625	Drosophila_melanogaster
ENSAMXG00000004011	srp72	96	78.072	ENSETEG00000005191	SRP72	98	77.169	Echinops_telfairi
ENSAMXG00000004011	srp72	75	61.328	ENSEBUG00000003696	srp72	98	61.328	Eptatretus_burgeri
ENSAMXG00000004011	srp72	97	77.489	ENSEASG00005017747	SRP72	97	77.370	Equus_asinus_asinus
ENSAMXG00000004011	srp72	97	77.489	ENSECAG00000006920	SRP72	97	77.370	Equus_caballus
ENSAMXG00000004011	srp72	100	82.021	ENSELUG00000022415	srp72	97	83.022	Esox_lucius
ENSAMXG00000004011	srp72	97	77.554	ENSFCAG00000027600	SRP72	97	77.454	Felis_catus
ENSAMXG00000004011	srp72	96	79.751	ENSFALG00000006713	SRP72	99	78.711	Ficedula_albicollis
ENSAMXG00000004011	srp72	97	76.805	ENSFDAG00000002014	-	97	76.687	Fukomys_damarensis
ENSAMXG00000004011	srp72	97	48.916	ENSFDAG00000009793	-	94	48.223	Fukomys_damarensis
ENSAMXG00000004011	srp72	100	82.090	ENSFHEG00000017652	srp72	90	82.595	Fundulus_heteroclitus
ENSAMXG00000004011	srp72	100	79.310	ENSGMOG00000005986	srp72	97	79.294	Gadus_morhua
ENSAMXG00000004011	srp72	96	79.719	ENSGALG00000011403	SRP72	97	79.416	Gallus_gallus
ENSAMXG00000004011	srp72	100	83.433	ENSGAFG00000017762	srp72	98	83.511	Gambusia_affinis
ENSAMXG00000004011	srp72	100	80.597	ENSGACG00000016749	srp72	97	81.069	Gasterosteus_aculeatus
ENSAMXG00000004011	srp72	87	77.873	ENSGAGG00000024611	SRP72	96	78.276	Gopherus_agassizii
ENSAMXG00000004011	srp72	97	77.029	ENSGGOG00000013234	-	97	76.911	Gorilla_gorilla
ENSAMXG00000004011	srp72	100	83.408	ENSHBUG00000020723	srp72	98	83.486	Haplochromis_burtoni
ENSAMXG00000004011	srp72	97	59.231	ENSHGLG00000018597	-	97	59.509	Heterocephalus_glaber_female
ENSAMXG00000004011	srp72	97	76.651	ENSHGLG00000009791	SRP72	97	76.534	Heterocephalus_glaber_female
ENSAMXG00000004011	srp72	51	58.824	ENSHGLG00000003496	-	97	59.064	Heterocephalus_glaber_female
ENSAMXG00000004011	srp72	98	70.795	ENSHGLG00000005029	-	98	70.229	Heterocephalus_glaber_female
ENSAMXG00000004011	srp72	86	70.044	ENSHGLG00000003950	-	97	70.044	Heterocephalus_glaber_female
ENSAMXG00000004011	srp72	89	69.867	ENSHGLG00000010633	-	99	70.777	Heterocephalus_glaber_female
ENSAMXG00000004011	srp72	86	69.604	ENSHGLG00100017133	-	97	69.604	Heterocephalus_glaber_male
ENSAMXG00000004011	srp72	98	70.795	ENSHGLG00100011236	-	98	70.229	Heterocephalus_glaber_male
ENSAMXG00000004011	srp72	97	76.651	ENSHGLG00100009021	SRP72	97	76.534	Heterocephalus_glaber_male
ENSAMXG00000004011	srp72	97	58.000	ENSHGLG00100009346	-	97	58.525	Heterocephalus_glaber_male
ENSAMXG00000004011	srp72	100	82.733	ENSHCOG00000013760	srp72	98	82.642	Hippocampus_comes
ENSAMXG00000004011	srp72	100	91.429	ENSIPUG00000000210	srp72	98	91.692	Ictalurus_punctatus
ENSAMXG00000004011	srp72	97	77.182	ENSSTOG00000007305	SRP72	97	77.064	Ictidomys_tridecemlineatus
ENSAMXG00000004011	srp72	96	77.882	ENSJJAG00000018324	Srp72	97	77.064	Jaculus_jaculus
ENSAMXG00000004011	srp72	100	81.493	ENSKMAG00000003776	srp72	98	81.527	Kryptolebias_marmoratus
ENSAMXG00000004011	srp72	98	84.356	ENSLOCG00000002628	srp72	97	84.356	Lepisosteus_oculatus
ENSAMXG00000004011	srp72	97	76.876	ENSLAFG00000018307	SRP72	97	76.758	Loxodonta_africana
ENSAMXG00000004011	srp72	98	62.423	ENSMFAG00000037164	-	97	63.003	Macaca_fascicularis
ENSAMXG00000004011	srp72	97	77.504	ENSMFAG00000031065	SRP72	97	77.385	Macaca_fascicularis
ENSAMXG00000004011	srp72	98	77.454	ENSMMUG00000016368	SRP72	97	77.147	Macaca_mulatta
ENSAMXG00000004011	srp72	94	58.347	ENSMMUG00000021262	-	95	58.054	Macaca_mulatta
ENSAMXG00000004011	srp72	97	77.504	ENSMNEG00000038065	-	97	77.385	Macaca_nemestrina
ENSAMXG00000004011	srp72	95	76.693	ENSMLEG00000030140	-	94	76.063	Mandrillus_leucophaeus
ENSAMXG00000004011	srp72	100	83.259	ENSMAMG00000014989	srp72	88	83.259	Mastacembelus_armatus
ENSAMXG00000004011	srp72	100	83.408	ENSMZEG00005003325	srp72	98	83.486	Maylandia_zebra
ENSAMXG00000004011	srp72	93	75.243	ENSMGAG00000008567	SRP72	97	77.434	Meleagris_gallopavo
ENSAMXG00000004011	srp72	99	77.086	ENSMAUG00000001237	Srp72	99	76.762	Mesocricetus_auratus
ENSAMXG00000004011	srp72	95	77.795	ENSMICG00000008507	-	94	77.795	Microcebus_murinus
ENSAMXG00000004011	srp72	99	76.383	ENSMOCG00000020309	Srp72	99	76.532	Microtus_ochrogaster
ENSAMXG00000004011	srp72	100	81.614	ENSMMOG00000002627	srp72	98	81.957	Mola_mola
ENSAMXG00000004011	srp72	96	73.676	ENSMODG00000020697	SRP72	97	73.466	Monodelphis_domestica
ENSAMXG00000004011	srp72	100	82.212	ENSMALG00000003747	srp72	98	83.220	Monopterus_albus
ENSAMXG00000004011	srp72	99	76.233	MGP_CAROLIEiJ_G0027323	Srp72	99	76.383	Mus_caroli
ENSAMXG00000004011	srp72	99	76.233	ENSMUSG00000036323	Srp72	99	76.383	Mus_musculus
ENSAMXG00000004011	srp72	99	77.039	MGP_PahariEiJ_G0017103	Srp72	99	76.912	Mus_pahari
ENSAMXG00000004011	srp72	99	76.233	MGP_SPRETEiJ_G0028317	Srp72	99	76.383	Mus_spretus
ENSAMXG00000004011	srp72	96	77.760	ENSMPUG00000004828	SRP72	97	77.301	Mustela_putorius_furo
ENSAMXG00000004011	srp72	96	77.640	ENSMLUG00000007344	SRP72	97	77.252	Myotis_lucifugus
ENSAMXG00000004011	srp72	100	76.751	ENSNGAG00000012595	Srp72	100	76.751	Nannospalax_galili
ENSAMXG00000004011	srp72	100	79.223	ENSNBRG00000014492	srp72	98	79.205	Neolamprologus_brichardi
ENSAMXG00000004011	srp72	97	72.393	ENSNLEG00000008806	-	97	72.171	Nomascus_leucogenys
ENSAMXG00000004011	srp72	96	67.290	ENSMEUG00000005164	SRP72	87	74.745	Notamacropus_eugenii
ENSAMXG00000004011	srp72	96	77.414	ENSOPRG00000012521	SRP72	97	76.606	Ochotona_princeps
ENSAMXG00000004011	srp72	96	75.272	ENSODEG00000012214	SRP72	97	74.847	Octodon_degus
ENSAMXG00000004011	srp72	100	83.707	ENSONIG00000001446	srp72	97	83.792	Oreochromis_niloticus
ENSAMXG00000004011	srp72	97	61.315	ENSOANG00000008562	SRP72	96	61.061	Ornithorhynchus_anatinus
ENSAMXG00000004011	srp72	97	76.840	ENSOCUG00000012226	SRP72	97	76.758	Oryctolagus_cuniculus
ENSAMXG00000004011	srp72	100	80.960	ENSORLG00000020418	srp72	98	81.288	Oryzias_latipes
ENSAMXG00000004011	srp72	100	80.510	ENSORLG00020009138	srp72	98	79.129	Oryzias_latipes_hni
ENSAMXG00000004011	srp72	100	80.510	ENSORLG00015018251	srp72	98	80.828	Oryzias_latipes_hsok
ENSAMXG00000004011	srp72	100	80.480	ENSOMEG00000022008	srp72	98	81.413	Oryzias_melastigma
ENSAMXG00000004011	srp72	97	78.120	ENSOGAG00000003578	SRP72	97	78.154	Otolemur_garnettii
ENSAMXG00000004011	srp72	97	76.570	ENSOARG00000004329	SRP72	97	76.606	Ovis_aries
ENSAMXG00000004011	srp72	81	61.754	ENSPPAG00000032490	-	95	59.259	Pan_paniscus
ENSAMXG00000004011	srp72	98	56.116	ENSPPAG00000011428	-	95	56.422	Pan_paniscus
ENSAMXG00000004011	srp72	97	77.489	ENSPPAG00000042265	SRP72	97	77.370	Pan_paniscus
ENSAMXG00000004011	srp72	96	77.760	ENSPPRG00000015991	SRP72	97	77.454	Panthera_pardus
ENSAMXG00000004011	srp72	96	77.760	ENSPTIG00000018786	SRP72	97	77.454	Panthera_tigris_altaica
ENSAMXG00000004011	srp72	81	61.754	ENSPTRG00000043609	-	95	59.436	Pan_troglodytes
ENSAMXG00000004011	srp72	97	77.489	ENSPTRG00000048466	-	97	77.370	Pan_troglodytes
ENSAMXG00000004011	srp72	98	58.257	ENSPTRG00000048100	-	95	58.679	Pan_troglodytes
ENSAMXG00000004011	srp72	97	77.335	ENSPANG00000005495	SRP72	97	77.217	Papio_anubis
ENSAMXG00000004011	srp72	94	62.500	ENSPANG00000030230	-	97	62.939	Papio_anubis
ENSAMXG00000004011	srp72	94	78.594	ENSPSIG00000003003	SRP72	98	78.469	Pelodiscus_sinensis
ENSAMXG00000004011	srp72	99	77.086	ENSPEMG00000012828	-	99	76.762	Peromyscus_maniculatus_bairdii
ENSAMXG00000004011	srp72	97	76.352	ENSPCIG00000000732	SRP72	97	76.227	Phascolarctos_cinereus
ENSAMXG00000004011	srp72	100	83.731	ENSPFOG00000003480	srp72	98	83.817	Poecilia_formosa
ENSAMXG00000004011	srp72	100	83.881	ENSPLAG00000020122	srp72	98	83.969	Poecilia_latipinna
ENSAMXG00000004011	srp72	100	83.284	ENSPMEG00000019988	srp72	98	83.359	Poecilia_mexicana
ENSAMXG00000004011	srp72	100	83.731	ENSPREG00000006218	srp72	98	83.817	Poecilia_reticulata
ENSAMXG00000004011	srp72	57	64.136	ENSPPYG00000009152	-	96	62.924	Pongo_abelii
ENSAMXG00000004011	srp72	98	77.252	ENSPPYG00000014752	-	76	77.134	Pongo_abelii
ENSAMXG00000004011	srp72	97	75.651	ENSPVAG00000005590	SRP72	97	75.688	Pteropus_vampyrus
ENSAMXG00000004011	srp72	100	83.408	ENSPNYG00000001916	srp72	98	83.486	Pundamilia_nyererei
ENSAMXG00000004011	srp72	100	93.835	ENSPNAG00000022424	srp72	98	94.154	Pygocentrus_nattereri
ENSAMXG00000004011	srp72	99	74.738	ENSRNOG00000002100	LOC108348180	99	75.336	Rattus_norvegicus
ENSAMXG00000004011	srp72	97	72.129	ENSRBIG00000042069	SRP72	97	72.324	Rhinopithecus_bieti
ENSAMXG00000004011	srp72	99	60.363	ENSRBIG00000029328	-	98	61.379	Rhinopithecus_bieti
ENSAMXG00000004011	srp72	97	77.335	ENSRROG00000035704	SRP72	97	77.217	Rhinopithecus_roxellana
ENSAMXG00000004011	srp72	95	75.314	ENSSHAG00000000614	SRP72	97	73.780	Sarcophilus_harrisii
ENSAMXG00000004011	srp72	100	83.910	ENSSFOG00015002026	srp72	98	84.462	Scleropages_formosus
ENSAMXG00000004011	srp72	100	81.250	ENSSMAG00000007639	srp72	98	82.040	Scophthalmus_maximus
ENSAMXG00000004011	srp72	100	83.408	ENSSDUG00000007345	srp72	96	83.817	Seriola_dumerili
ENSAMXG00000004011	srp72	100	83.558	ENSSLDG00000021819	srp72	98	83.257	Seriola_lalandi_dorsalis
ENSAMXG00000004011	srp72	74	75.000	ENSSARG00000005804	SRP72	76	74.495	Sorex_araneus
ENSAMXG00000004011	srp72	96	78.660	ENSSPUG00000009740	SRP72	97	77.914	Sphenodon_punctatus
ENSAMXG00000004011	srp72	100	83.707	ENSSPAG00000011565	srp72	98	84.251	Stegastes_partitus
ENSAMXG00000004011	srp72	99	74.622	ENSSSCG00000008900	SRP72	97	74.847	Sus_scrofa
ENSAMXG00000004011	srp72	96	79.316	ENSTGUG00000004767	SRP72	99	78.144	Taeniopygia_guttata
ENSAMXG00000004011	srp72	98	81.902	ENSTRUG00000009831	srp72	98	81.902	Takifugu_rubripes
ENSAMXG00000004011	srp72	100	82.960	ENSTNIG00000013073	srp72	97	83.028	Tetraodon_nigroviridis
ENSAMXG00000004011	srp72	88	67.241	ENSTBEG00000007394	SRP72	99	56.054	Tupaia_belangeri
ENSAMXG00000004011	srp72	92	77.023	ENSTTRG00000010945	SRP72	98	77.060	Tursiops_truncatus
ENSAMXG00000004011	srp72	57	77.690	ENSUAMG00000001701	SRP72	100	76.579	Ursus_americanus
ENSAMXG00000004011	srp72	96	77.916	ENSUMAG00000008151	SRP72	97	77.454	Ursus_maritimus
ENSAMXG00000004011	srp72	97	75.809	ENSVPAG00000000458	SRP72	97	75.846	Vicugna_pacos
ENSAMXG00000004011	srp72	97	77.182	ENSVVUG00000006020	SRP72	97	77.217	Vulpes_vulpes
ENSAMXG00000004011	srp72	95	73.469	ENSXETG00000010205	srp72	100	73.469	Xenopus_tropicalis
ENSAMXG00000004011	srp72	100	82.985	ENSXMAG00000018000	srp72	97	83.028	Xiphophorus_maculatus