EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000004144 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 15999 bases
Position: chr14:2623121-2639119
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000004249	PARP	PF00644.20	8.6e-39	1	4
ENSAMXP00000004249	PARP	PF00644.20	8.6e-39	2	4
ENSAMXP00000004249	PARP	PF00644.20	8.6e-39	3	4
ENSAMXP00000004249	PARP	PF00644.20	8.6e-39	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000004249	-	1716	-	ENSAMXP00000004249	571 (aa)	-	W5K9I8

Gene Model

Click here to download ENSAMXG00000004144's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000004144's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000004144	-	86	55.556	ENSAMXG00000025547	gig2o	61	55.556
ENSAMXG00000004144	-	88	80.328	ENSAMXG00000026038	-	92	80.328
ENSAMXG00000004144	-	94	86.765	ENSAMXG00000041087	-	97	86.131
ENSAMXG00000004144	-	91	58.333	ENSAMXG00000025187	gig2p	69	58.333
ENSAMXG00000004144	-	82	63.793	ENSAMXG00000016000	-	86	63.793
ENSAMXG00000004144	-	84	59.524	ENSAMXG00000030672	-	92	59.524
ENSAMXG00000004144	-	88	65.812	ENSAMXG00000043196	-	98	65.812
ENSAMXG00000004144	-	88	51.639	ENSAMXG00000026111	-	62	51.639
ENSAMXG00000004144	-	92	89.516	ENSAMXG00000026110	gig2d	96	89.516
ENSAMXG00000004144	-	93	87.597	ENSAMXG00000032512	gig2d	97	87.597

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000004144	-	87	66.393	ENSAPOG00000010190	gig2h	85	66.393	Acanthochromis_polyacanthus
ENSAMXG00000004144	-	92	59.524	ENSAPOG00000002358	gig2p	87	59.524	Acanthochromis_polyacanthus
ENSAMXG00000004144	-	84	62.185	ENSACIG00000006917	-	84	62.185	Amphilophus_citrinellus
ENSAMXG00000004144	-	92	66.667	ENSACIG00000023385	-	93	66.667	Amphilophus_citrinellus
ENSAMXG00000004144	-	85	72.951	ENSACIG00000009062	-	87	72.951	Amphilophus_citrinellus
ENSAMXG00000004144	-	90	68.548	ENSACIG00000018452	-	91	70.588	Amphilophus_citrinellus
ENSAMXG00000004144	-	89	61.111	ENSACIG00000006934	gig2p	67	61.111	Amphilophus_citrinellus
ENSAMXG00000004144	-	91	59.524	ENSAOCG00000003416	gig2p	79	59.524	Amphiprion_ocellaris
ENSAMXG00000004144	-	95	67.188	ENSAOCG00000010944	-	80	67.188	Amphiprion_ocellaris
ENSAMXG00000004144	-	91	59.524	ENSAPEG00000017256	gig2p	57	62.295	Amphiprion_percula
ENSAMXG00000004144	-	90	53.226	ENSATEG00000003204	gig2p	92	53.226	Anabas_testudineus
ENSAMXG00000004144	-	92	58.015	ENSATEG00000003163	gig2p	97	58.015	Anabas_testudineus
ENSAMXG00000004144	-	87	61.789	ENSATEG00000003229	gig2p	69	60.317	Anabas_testudineus
ENSAMXG00000004144	-	89	60.000	ENSATEG00000003250	gig2p	70	60.000	Anabas_testudineus
ENSAMXG00000004144	-	94	58.140	ENSACLG00000006461	-	85	58.140	Astatotilapia_calliptera
ENSAMXG00000004144	-	86	69.672	ENSACLG00000019044	gig2g	97	69.672	Astatotilapia_calliptera
ENSAMXG00000004144	-	84	65.812	ENSCVAG00000003734	-	94	65.812	Cyprinodon_variegatus
ENSAMXG00000004144	-	91	54.032	ENSCVAG00000006837	gig2p	78	54.032	Cyprinodon_variegatus
ENSAMXG00000004144	-	89	60.484	ENSCVAG00000003718	-	90	60.484	Cyprinodon_variegatus
ENSAMXG00000004144	-	91	59.542	ENSCVAG00000006821	gig2p	99	59.542	Cyprinodon_variegatus
ENSAMXG00000004144	-	96	68.456	ENSDARG00000069769	gig2j	98	68.456	Danio_rerio
ENSAMXG00000004144	-	94	73.228	ENSDARG00000091730	gig2l	100	76.106	Danio_rerio
ENSAMXG00000004144	-	92	71.429	ENSDARG00000098463	gig2g	95	71.429	Danio_rerio
ENSAMXG00000004144	-	90	59.091	ENSDARG00000088260	gig2p	63	59.091	Danio_rerio
ENSAMXG00000004144	-	97	69.853	ENSDARG00000098772	gig2d	97	69.853	Danio_rerio
ENSAMXG00000004144	-	88	55.556	ENSDARG00000086903	gig2o	60	55.556	Danio_rerio
ENSAMXG00000004144	-	99	64.164	ENSDARG00000075757	gig2e	99	64.164	Danio_rerio
ENSAMXG00000004144	-	91	74.590	ENSDARG00000099735	gig2f	91	74.590	Danio_rerio
ENSAMXG00000004144	-	97	72.414	ENSDARG00000099325	gig2i	98	72.414	Danio_rerio
ENSAMXG00000004144	-	92	70.635	ENSDARG00000103444	gig2h	95	70.635	Danio_rerio
ENSAMXG00000004144	-	87	56.349	ENSELUG00000017166	gig2o	61	56.349	Esox_lucius
ENSAMXG00000004144	-	93	55.556	ENSFHEG00000017712	-	70	55.556	Fundulus_heteroclitus
ENSAMXG00000004144	-	94	59.677	ENSFHEG00000017724	gig2p	83	59.677	Fundulus_heteroclitus
ENSAMXG00000004144	-	90	56.250	ENSGAFG00000009440	gig2p	99	54.015	Gambusia_affinis
ENSAMXG00000004144	-	90	59.524	ENSGAFG00000009453	gig2p	97	59.524	Gambusia_affinis
ENSAMXG00000004144	-	61	60.920	ENSGACG00000010431	gig2p	100	60.920	Gasterosteus_aculeatus
ENSAMXG00000004144	-	86	68.908	ENSHBUG00000019410	-	99	67.227	Haplochromis_burtoni
ENSAMXG00000004144	-	91	58.647	ENSHBUG00000010491	gig2p	71	58.647	Haplochromis_burtoni
ENSAMXG00000004144	-	89	71.654	ENSHBUG00000018939	-	91	71.654	Haplochromis_burtoni
ENSAMXG00000004144	-	92	58.871	ENSHBUG00000010473	-	89	58.871	Haplochromis_burtoni
ENSAMXG00000004144	-	85	65.812	ENSIPUG00000007003	-	98	65.812	Ictalurus_punctatus
ENSAMXG00000004144	-	84	62.500	ENSIPUG00000022554	gig2p	72	62.500	Ictalurus_punctatus
ENSAMXG00000004144	-	85	57.937	ENSIPUG00000009280	gig2o	53	57.937	Ictalurus_punctatus
ENSAMXG00000004144	-	80	61.207	ENSIPUG00000005433	-	72	61.207	Ictalurus_punctatus
ENSAMXG00000004144	-	84	54.167	ENSIPUG00000001531	-	58	54.167	Ictalurus_punctatus
ENSAMXG00000004144	-	84	66.379	ENSIPUG00000000101	-	93	66.379	Ictalurus_punctatus
ENSAMXG00000004144	-	99	74.582	ENSIPUG00000001510	-	100	74.582	Ictalurus_punctatus
ENSAMXG00000004144	-	86	64.706	ENSIPUG00000007035	-	85	64.706	Ictalurus_punctatus
ENSAMXG00000004144	-	90	60.156	ENSKMAG00000007907	gig2p	67	57.937	Kryptolebias_marmoratus
ENSAMXG00000004144	-	91	55.556	ENSKMAG00000007923	-	68	55.556	Kryptolebias_marmoratus
ENSAMXG00000004144	-	91	55.797	ENSLBEG00000018765	-	71	55.797	Labrus_bergylta
ENSAMXG00000004144	-	92	59.524	ENSLBEG00000018778	gig2p	82	59.524	Labrus_bergylta
ENSAMXG00000004144	-	93	69.697	ENSLACG00000000239	-	90	69.697	Latimeria_chalumnae
ENSAMXG00000004144	-	86	53.333	ENSLACG00000018888	-	69	53.333	Latimeria_chalumnae
ENSAMXG00000004144	-	97	62.590	ENSLACG00000015833	-	97	62.590	Latimeria_chalumnae
ENSAMXG00000004144	-	91	60.630	ENSLACG00000015882	gig2p	66	60.630	Latimeria_chalumnae
ENSAMXG00000004144	-	87	54.237	ENSLOCG00000005879	-	64	54.237	Lepisosteus_oculatus
ENSAMXG00000004144	-	96	67.586	ENSLOCG00000005897	gig2e	99	67.586	Lepisosteus_oculatus
ENSAMXG00000004144	-	91	59.398	ENSMAMG00000011285	gig2p	69	59.398	Mastacembelus_armatus
ENSAMXG00000004144	-	94	57.258	ENSMZEG00005013815	-	73	57.258	Maylandia_zebra
ENSAMXG00000004144	-	85	60.169	ENSMMOG00000005597	-	65	60.169	Mola_mola
ENSAMXG00000004144	-	90	58.475	ENSMMOG00000005594	gig2p	70	58.475	Mola_mola
ENSAMXG00000004144	-	91	59.524	ENSMALG00000008417	gig2p	68	59.524	Monopterus_albus
ENSAMXG00000004144	-	94	57.258	ENSNBRG00000000872	-	94	57.258	Neolamprologus_brichardi
ENSAMXG00000004144	-	93	58.462	ENSNBRG00000000843	gig2p	76	58.462	Neolamprologus_brichardi
ENSAMXG00000004144	-	92	69.841	ENSNBRG00000009062	-	93	69.841	Neolamprologus_brichardi
ENSAMXG00000004144	-	85	66.949	ENSNBRG00000009049	-	86	67.521	Neolamprologus_brichardi
ENSAMXG00000004144	-	95	54.770	ENSONIG00000011824	gig2p	94	54.770	Oreochromis_niloticus
ENSAMXG00000004144	-	95	64.664	ENSONIG00000009460	gig2h	99	64.664	Oreochromis_niloticus
ENSAMXG00000004144	-	90	58.333	ENSORLG00000028073	-	76	58.333	Oryzias_latipes
ENSAMXG00000004144	-	95	58.647	ENSORLG00000010287	gig2p	79	59.542	Oryzias_latipes
ENSAMXG00000004144	-	93	59.843	ENSORLG00000027961	-	59	60.800	Oryzias_latipes
ENSAMXG00000004144	-	93	59.231	ENSORLG00020008422	gig2p	97	60.630	Oryzias_latipes_hni
ENSAMXG00000004144	-	83	59.167	ENSORLG00020008444	-	69	59.167	Oryzias_latipes_hni
ENSAMXG00000004144	-	90	57.500	ENSORLG00015022642	-	67	57.500	Oryzias_latipes_hsok
ENSAMXG00000004144	-	95	61.739	ENSORLG00015008571	gig2g	95	61.739	Oryzias_latipes_hsok
ENSAMXG00000004144	-	86	59.055	ENSORLG00015022600	gig2p	95	59.055	Oryzias_latipes_hsok
ENSAMXG00000004144	-	88	60.656	ENSOMEG00000013250	-	77	60.656	Oryzias_melastigma
ENSAMXG00000004144	-	91	58.621	ENSOMEG00000007340	-	85	58.621	Oryzias_melastigma
ENSAMXG00000004144	-	90	58.594	ENSOMEG00000015253	-	93	58.594	Oryzias_melastigma
ENSAMXG00000004144	-	91	60.317	ENSOMEG00000015239	-	93	60.317	Oryzias_melastigma
ENSAMXG00000004144	-	95	60.938	ENSOMEG00000013589	-	89	60.938	Oryzias_melastigma
ENSAMXG00000004144	-	81	67.826	ENSPKIG00000000927	-	71	67.826	Paramormyrops_kingsleyae
ENSAMXG00000004144	-	83	65.254	ENSPKIG00000000878	-	92	65.254	Paramormyrops_kingsleyae
ENSAMXG00000004144	-	89	65.323	ENSPKIG00000003192	-	89	65.323	Paramormyrops_kingsleyae
ENSAMXG00000004144	-	84	67.480	ENSPKIG00000001665	-	92	67.480	Paramormyrops_kingsleyae
ENSAMXG00000004144	-	88	65.354	ENSPKIG00000000863	-	91	65.354	Paramormyrops_kingsleyae
ENSAMXG00000004144	-	86	68.333	ENSPKIG00000014377	-	99	68.333	Paramormyrops_kingsleyae
ENSAMXG00000004144	-	88	65.600	ENSPKIG00000014390	-	97	65.600	Paramormyrops_kingsleyae
ENSAMXG00000004144	-	91	62.295	ENSPMAG00000010332	-	95	62.295	Petromyzon_marinus
ENSAMXG00000004144	-	94	63.636	ENSPMAG00000005660	-	98	63.636	Petromyzon_marinus
ENSAMXG00000004144	-	95	65.169	ENSPFOG00000005274	gig2g	99	65.169	Poecilia_formosa
ENSAMXG00000004144	-	95	56.272	ENSPFOG00000006191	gig2p	95	56.272	Poecilia_formosa
ENSAMXG00000004144	-	92	56.391	ENSPMEG00000018196	-	70	56.391	Poecilia_mexicana
ENSAMXG00000004144	-	94	66.154	ENSPMEG00000007652	gig2h	93	66.154	Poecilia_mexicana
ENSAMXG00000004144	-	94	58.730	ENSPMEG00000018167	gig2p	75	58.730	Poecilia_mexicana
ENSAMXG00000004144	-	88	56.780	ENSPREG00000005273	-	64	56.780	Poecilia_reticulata
ENSAMXG00000004144	-	82	62.016	ENSPREG00000005283	gig2p	81	62.016	Poecilia_reticulata
ENSAMXG00000004144	-	92	67.969	ENSPNYG00000009627	-	83	67.969	Pundamilia_nyererei
ENSAMXG00000004144	-	91	58.647	ENSPNYG00000021226	gig2p	71	58.647	Pundamilia_nyererei
ENSAMXG00000004144	-	96	66.412	ENSPNYG00000009654	-	97	66.412	Pundamilia_nyererei
ENSAMXG00000004144	-	92	55.882	ENSPNYG00000021214	-	90	55.882	Pundamilia_nyererei
ENSAMXG00000004144	-	89	59.398	ENSPNAG00000014831	gig2p	67	59.398	Pygocentrus_nattereri
ENSAMXG00000004144	-	82	65.546	ENSPNAG00000026625	-	86	65.546	Pygocentrus_nattereri
ENSAMXG00000004144	-	81	66.102	ENSPNAG00000026634	-	94	66.102	Pygocentrus_nattereri
ENSAMXG00000004144	-	86	57.500	ENSPNAG00000021255	-	90	57.500	Pygocentrus_nattereri
ENSAMXG00000004144	-	87	57.937	ENSPNAG00000012118	gig2o	63	57.937	Pygocentrus_nattereri
ENSAMXG00000004144	-	86	54.098	ENSPNAG00000015816	-	60	54.098	Pygocentrus_nattereri
ENSAMXG00000004144	-	92	77.344	ENSPNAG00000015811	gig2d	94	77.344	Pygocentrus_nattereri
ENSAMXG00000004144	-	96	79.851	ENSPNAG00000015845	gig2d	96	79.851	Pygocentrus_nattereri
ENSAMXG00000004144	-	91	76.800	ENSSFOG00015005869	-	69	76.800	Scleropages_formosus
ENSAMXG00000004144	-	95	69.600	ENSSFOG00015005876	-	98	69.600	Scleropages_formosus
ENSAMXG00000004144	-	99	67.442	ENSSFOG00015005900	-	100	67.442	Scleropages_formosus
ENSAMXG00000004144	-	89	63.200	ENSSFOG00015009887	gig2p	64	63.200	Scleropages_formosus
ENSAMXG00000004144	-	89	50.000	ENSSFOG00015007829	gig2o	60	50.000	Scleropages_formosus
ENSAMXG00000004144	-	88	54.098	ENSSFOG00015005862	-	67	54.098	Scleropages_formosus
ENSAMXG00000004144	-	89	58.065	ENSSMAG00000008329	-	66	58.065	Scophthalmus_maximus
ENSAMXG00000004144	-	90	60.938	ENSSMAG00000008317	gig2p	67	60.938	Scophthalmus_maximus
ENSAMXG00000004144	-	89	58.400	ENSSDUG00000018069	gig2p	71	59.843	Seriola_dumerili
ENSAMXG00000004144	-	91	57.724	ENSSDUG00000018079	-	95	57.724	Seriola_dumerili
ENSAMXG00000004144	-	92	59.055	ENSSLDG00000018358	gig2p	71	59.055	Seriola_lalandi_dorsalis
ENSAMXG00000004144	-	89	59.231	ENSSPAG00000005252	gig2p	75	59.231	Stegastes_partitus
ENSAMXG00000004144	-	91	58.871	ENSTRUG00000023008	gig2p	78	59.524	Takifugu_rubripes
ENSAMXG00000004144	-	95	61.649	ENSXETG00000032410	-	89	61.649	Xenopus_tropicalis
ENSAMXG00000004144	-	92	55.639	ENSXMAG00000019444	-	71	55.639	Xiphophorus_maculatus