EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAMXG00000004221 (Gene tree)
Gene ID
103047399
Gene Symbol
hdlbpa
Alias
HBP|cb591|cb811|hdlbp|wu:fb36d01|wu:fb94h08|wu:fc23d06|wu:fc75h07
Full Name
high density lipoprotein binding protein
Gene Type
protein_coding
Species
Astyanax_mexicanus
Status
putative
Strand
Minus strand
Length
24489 bases
Position
chr13:15336188-15360676
Accession
103047399
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAMXP00000004342KH_1PF00013.291.1e-183114
ENSAMXP00000004342KH_1PF00013.291.1e-183214
ENSAMXP00000004342KH_1PF00013.291.1e-183314
ENSAMXP00000004342KH_1PF00013.291.1e-183414
ENSAMXP00000004342KH_1PF00013.291.1e-183514
ENSAMXP00000004342KH_1PF00013.291.1e-183614
ENSAMXP00000004342KH_1PF00013.291.1e-183714
ENSAMXP00000004342KH_1PF00013.291.1e-183814
ENSAMXP00000004342KH_1PF00013.291.1e-183914
ENSAMXP00000004342KH_1PF00013.291.1e-1831014
ENSAMXP00000004342KH_1PF00013.291.1e-1831114
ENSAMXP00000004342KH_1PF00013.291.1e-1831214
ENSAMXP00000004342KH_1PF00013.291.1e-1831314
ENSAMXP00000004342KH_1PF00013.291.1e-1831414
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAMXT00000004342-8765XM_007253654ENSAMXP000000043421178 (aa)XP_007253716W5K9T1
Gene Model
Click here to download ENSAMXG00000004221's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000004221's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAMXG00000004221hdlbpa9963.376ENSAMXG00000019946hdlbpb9363.376
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAMXG00000004221hdlbpa9980.236ENSG00000115677HDLBP9784.556Homo_sapiens
ENSAMXG00000004221hdlbpa10092.210ENSAPOG00000012609hdlbpa9392.295Acanthochromis_polyacanthus
ENSAMXG00000004221hdlbpa9980.659ENSAMEG00000016552HDLBP9380.659Ailuropoda_melanoleuca
ENSAMXG00000004221hdlbpa10089.696ENSACIG00000006015hdlbpa9389.696Amphilophus_citrinellus
ENSAMXG00000004221hdlbpa10092.125ENSAOCG00000000300hdlbpa9392.210Amphiprion_ocellaris
ENSAMXG00000004221hdlbpa10092.125ENSAPEG00000000522hdlbpa9992.210Amphiprion_percula
ENSAMXG00000004221hdlbpa10091.455ENSATEG00000009748hdlbpa9391.455Anabas_testudineus
ENSAMXG00000004221hdlbpa9981.503ENSACAG00000001556HDLBP9381.503Anolis_carolinensis
ENSAMXG00000004221hdlbpa9979.899ENSANAG00000020545HDLBP9379.899Aotus_nancymaae
ENSAMXG00000004221hdlbpa10091.702ENSACLG00000025965hdlbpa9391.787Astatotilapia_calliptera
ENSAMXG00000004221hdlbpa9979.392ENSBTAG00000004315HDLBP9379.392Bos_taurus
ENSAMXG00000004221hdlbpa9979.848ENSCJAG00000006152HDLBP9379.848Callithrix_jacchus
ENSAMXG00000004221hdlbpa9980.743ENSCAFG00000012913HDLBP10080.743Canis_familiaris
ENSAMXG00000004221hdlbpa9980.743ENSCAFG00020025089HDLBP9380.743Canis_lupus_dingo
ENSAMXG00000004221hdlbpa9979.392ENSCHIG00000022364HDLBP9379.392Capra_hircus
ENSAMXG00000004221hdlbpa9979.899ENSTSYG00000002379HDLBP9379.899Carlito_syrichta
ENSAMXG00000004221hdlbpa9978.239ENSCAPG00000008584HDLBP9578.239Cavia_aperea
ENSAMXG00000004221hdlbpa9980.186ENSCPOG00000006297HDLBP9380.186Cavia_porcellus
ENSAMXG00000004221hdlbpa9957.086ENSCCAG00000037920-10057.086Cebus_capucinus
ENSAMXG00000004221hdlbpa9980.236ENSCCAG00000023361-9380.236Cebus_capucinus
ENSAMXG00000004221hdlbpa9980.513ENSCATG00000039363HDLBP9380.321Cercocebus_atys
ENSAMXG00000004221hdlbpa9980.271ENSCLAG00000002365HDLBP9380.271Chinchilla_lanigera
ENSAMXG00000004221hdlbpa9980.321ENSCSAG00000005781HDLBP9280.321Chlorocebus_sabaeus
ENSAMXG00000004221hdlbpa9258.668ENSCHOG00000003882-9358.668Choloepus_hoffmanni
ENSAMXG00000004221hdlbpa9979.983ENSCPBG00000002442HDLBP9379.983Chrysemys_picta_bellii
ENSAMXG00000004221hdlbpa9980.236ENSCANG00000033571HDLBP9380.236Colobus_angolensis_palliatus
ENSAMXG00000004221hdlbpa9979.899ENSCGRG00001006086Hdlbp9379.899Cricetulus_griseus_chok1gshd
ENSAMXG00000004221hdlbpa9743.816ENSCGRG000010105704921511C20Rik10043.816Cricetulus_griseus_chok1gshd
ENSAMXG00000004221hdlbpa9845.830ENSCGRG00000015720Gm3829245.830Cricetulus_griseus_crigri
ENSAMXG00000004221hdlbpa9979.899ENSCGRG00000014444Hdlbp9379.899Cricetulus_griseus_crigri
ENSAMXG00000004221hdlbpa10091.025ENSCSEG00000008853hdlbpa9391.025Cynoglossus_semilaevis
ENSAMXG00000004221hdlbpa10090.000ENSCVAG00000017892hdlbpa9390.000Cyprinodon_variegatus
ENSAMXG00000004221hdlbpa10092.803ENSDARG00000009830hdlbpa9393.057Danio_rerio
ENSAMXG00000004221hdlbpa9978.403ENSDNOG00000006753HDLBP9378.403Dasypus_novemcinctus
ENSAMXG00000004221hdlbpa9976.000ENSETEG00000005416-7476.000Echinops_telfairi
ENSAMXG00000004221hdlbpa9980.506ENSEASG00005008249HDLBP9380.506Equus_asinus_asinus
ENSAMXG00000004221hdlbpa9948.221ENSECAG00000028723-9348.221Equus_caballus
ENSAMXG00000004221hdlbpa9980.506ENSECAG00000012829HDLBP9380.506Equus_caballus
ENSAMXG00000004221hdlbpa9953.779ENSECAG00000030885-9353.891Equus_caballus
ENSAMXG00000004221hdlbpa9769.573ENSEEUG00000014648HDLBP10069.573Erinaceus_europaeus
ENSAMXG00000004221hdlbpa10089.425ENSELUG00000010700hdlbpa9389.425Esox_lucius
ENSAMXG00000004221hdlbpa9980.659ENSFCAG00000010455HDLBP9380.659Felis_catus
ENSAMXG00000004221hdlbpa9983.193ENSFALG00000003437HDLBP9383.193Ficedula_albicollis
ENSAMXG00000004221hdlbpa9980.118ENSFDAG00000000456HDLBP9380.118Fukomys_damarensis
ENSAMXG00000004221hdlbpa10090.686ENSFHEG00000004848hdlbpa9390.771Fundulus_heteroclitus
ENSAMXG00000004221hdlbpa10088.176ENSGMOG00000009932hdlbpa9388.176Gadus_morhua
ENSAMXG00000004221hdlbpa9982.770ENSGALG00000005823HDLBP9383.024Gallus_gallus
ENSAMXG00000004221hdlbpa10057.859ENSGAFG00000016766hdlbpa9257.859Gambusia_affinis
ENSAMXG00000004221hdlbpa10090.169ENSGACG00000004648hdlbpa9390.169Gasterosteus_aculeatus
ENSAMXG00000004221hdlbpa9982.939ENSGAGG00000004256HDLBP9382.939Gopherus_agassizii
ENSAMXG00000004221hdlbpa9980.236ENSGGOG00000004392HDLBP9380.236Gorilla_gorilla
ENSAMXG00000004221hdlbpa10091.871ENSHBUG00000001136hdlbpa9391.956Haplochromis_burtoni
ENSAMXG00000004221hdlbpa9979.695ENSHGLG00000004910HDLBP9379.695Heterocephalus_glaber_female
ENSAMXG00000004221hdlbpa9979.695ENSHGLG00100013326HDLBP9379.695Heterocephalus_glaber_male
ENSAMXG00000004221hdlbpa10090.593ENSHCOG00000014837hdlbpa9290.593Hippocampus_comes
ENSAMXG00000004221hdlbpa10094.576ENSIPUG00000013088hdlbp9294.576Ictalurus_punctatus
ENSAMXG00000004221hdlbpa9184.644ENSIPUG00000013177-9184.644Ictalurus_punctatus
ENSAMXG00000004221hdlbpa9979.695ENSSTOG00000013331HDLBP9380.288Ictidomys_tridecemlineatus
ENSAMXG00000004221hdlbpa9639.982ENSJJAG00000013712-9239.982Jaculus_jaculus
ENSAMXG00000004221hdlbpa9980.321ENSJJAG00000003596Hdlbp9380.321Jaculus_jaculus
ENSAMXG00000004221hdlbpa10090.262ENSKMAG00000007571hdlbpa9390.347Kryptolebias_marmoratus
ENSAMXG00000004221hdlbpa10091.477ENSLBEG00000027461hdlbpa9391.477Labrus_bergylta
ENSAMXG00000004221hdlbpa10085.182ENSLACG00000003592HDLBP9385.182Latimeria_chalumnae
ENSAMXG00000004221hdlbpa10090.609ENSLOCG00000006278hdlbpa9390.609Lepisosteus_oculatus
ENSAMXG00000004221hdlbpa9980.236ENSLAFG00000014826HDLBP9380.236Loxodonta_africana
ENSAMXG00000004221hdlbpa9980.321ENSMFAG00000033641HDLBP9380.321Macaca_fascicularis
ENSAMXG00000004221hdlbpa9980.236ENSMMUG00000004730HDLBP9380.068Macaca_mulatta
ENSAMXG00000004221hdlbpa9980.321ENSMNEG00000024260HDLBP9380.321Macaca_nemestrina
ENSAMXG00000004221hdlbpa9980.321ENSMLEG00000042734HDLBP9380.321Mandrillus_leucophaeus
ENSAMXG00000004221hdlbpa10091.702ENSMAMG00000008611hdlbpa9391.787Mastacembelus_armatus
ENSAMXG00000004221hdlbpa10091.702ENSMZEG00005009513hdlbpa9391.787Maylandia_zebra
ENSAMXG00000004221hdlbpa9982.704ENSMGAG00000003686HDLBP10082.968Meleagris_gallopavo
ENSAMXG00000004221hdlbpa9980.236ENSMAUG00000017743Hdlbp9380.236Mesocricetus_auratus
ENSAMXG00000004221hdlbpa9980.405ENSMICG00000004569HDLBP9380.405Microcebus_murinus
ENSAMXG00000004221hdlbpa9980.236ENSMOCG00000006679Hdlbp9380.236Microtus_ochrogaster
ENSAMXG00000004221hdlbpa9786.126ENSMMOG00000006880hdlbpa9286.126Mola_mola
ENSAMXG00000004221hdlbpa9980.889ENSMODG00000016033HDLBP9380.889Monodelphis_domestica
ENSAMXG00000004221hdlbpa10091.279ENSMALG00000015095hdlbpa9391.279Monopterus_albus
ENSAMXG00000004221hdlbpa9742.227MGP_CAROLIEiJ_G00333744921511C20Rik10042.227Mus_caroli
ENSAMXG00000004221hdlbpa9944.539MGP_CAROLIEiJ_G0033373Gm3829344.539Mus_caroli
ENSAMXG00000004221hdlbpa9980.068MGP_CAROLIEiJ_G0014456Hdlbp9380.068Mus_caroli
ENSAMXG00000004221hdlbpa9742.227ENSMUSG000000498154921511C20Rik10042.227Mus_musculus
ENSAMXG00000004221hdlbpa9844.092ENSMUSG00000062791Gm3829244.092Mus_musculus
ENSAMXG00000004221hdlbpa9980.236ENSMUSG00000034088Hdlbp9380.236Mus_musculus
ENSAMXG00000004221hdlbpa9944.699MGP_PahariEiJ_G0031913Gm3829344.699Mus_pahari
ENSAMXG00000004221hdlbpa9541.509MGP_PahariEiJ_G00319144921511C20Rik10041.509Mus_pahari
ENSAMXG00000004221hdlbpa9980.068MGP_PahariEiJ_G0027692Hdlbp9380.068Mus_pahari
ENSAMXG00000004221hdlbpa9980.068MGP_SPRETEiJ_G0015260Hdlbp9380.068Mus_spretus
ENSAMXG00000004221hdlbpa9742.017MGP_SPRETEiJ_G00345394921511C20Rik10042.017Mus_spretus
ENSAMXG00000004221hdlbpa9843.986MGP_SPRETEiJ_G0034538Gm3829243.986Mus_spretus
ENSAMXG00000004221hdlbpa9980.591ENSMPUG00000000163HDLBP9380.591Mustela_putorius_furo
ENSAMXG00000004221hdlbpa9980.372ENSMLUG00000005628HDLBP9380.372Myotis_lucifugus
ENSAMXG00000004221hdlbpa9980.321ENSNGAG00000014873Hdlbp9380.321Nannospalax_galili
ENSAMXG00000004221hdlbpa10091.871ENSNBRG00000000051hdlbpa9491.956Neolamprologus_brichardi
ENSAMXG00000004221hdlbpa9980.068ENSNLEG00000013818HDLBP9380.068Nomascus_leucogenys
ENSAMXG00000004221hdlbpa9373.747ENSNLEG00000031018-8873.747Nomascus_leucogenys
ENSAMXG00000004221hdlbpa9986.007ENSMEUG00000008427HDLBP8086.007Notamacropus_eugenii
ENSAMXG00000004221hdlbpa9979.730ENSOPRG00000011965-9379.730Ochotona_princeps
ENSAMXG00000004221hdlbpa9975.445ENSODEG00000017391-9375.445Octodon_degus
ENSAMXG00000004221hdlbpa9980.102ENSODEG00000012313-9380.102Octodon_degus
ENSAMXG00000004221hdlbpa10091.702ENSONIG00000019272hdlbpa9391.787Oreochromis_niloticus
ENSAMXG00000004221hdlbpa9981.810ENSOANG00000011759-9381.810Ornithorhynchus_anatinus
ENSAMXG00000004221hdlbpa6486.620ENSOANG00000021864-10086.620Ornithorhynchus_anatinus
ENSAMXG00000004221hdlbpa9980.338ENSOCUG00000012667HDLBP9380.338Oryctolagus_cuniculus
ENSAMXG00000004221hdlbpa10090.404ENSORLG00000002226hdlbpa9390.572Oryzias_latipes
ENSAMXG00000004221hdlbpa10090.572ENSORLG00020007905hdlbpa9390.572Oryzias_latipes_hni
ENSAMXG00000004221hdlbpa10090.404ENSORLG00015004126hdlbpa9390.572Oryzias_latipes_hsok
ENSAMXG00000004221hdlbpa10088.260ENSOMEG00000000247hdlbpa9388.345Oryzias_melastigma
ENSAMXG00000004221hdlbpa9979.307ENSOGAG00000000738HDLBP9379.307Otolemur_garnettii
ENSAMXG00000004221hdlbpa9977.311ENSOARG00000017870HDLBP9377.311Ovis_aries
ENSAMXG00000004221hdlbpa9980.152ENSPPAG00000023318HDLBP9380.152Pan_paniscus
ENSAMXG00000004221hdlbpa9980.659ENSPPRG00000010215HDLBP9380.659Panthera_pardus
ENSAMXG00000004221hdlbpa9483.987ENSPTIG00000009328HDLBP7783.987Panthera_tigris_altaica
ENSAMXG00000004221hdlbpa9980.152ENSPTRG00000013121HDLBP9380.152Pan_troglodytes
ENSAMXG00000004221hdlbpa9980.321ENSPANG00000011832HDLBP9380.321Papio_anubis
ENSAMXG00000004221hdlbpa10090.161ENSPKIG00000002392hdlbpa9390.161Paramormyrops_kingsleyae
ENSAMXG00000004221hdlbpa9483.723ENSPSIG00000010068HDLBP9283.723Pelodiscus_sinensis
ENSAMXG00000004221hdlbpa10078.693ENSPMGG00000002102hdlbpa9378.693Periophthalmus_magnuspinnatus
ENSAMXG00000004221hdlbpa9980.321ENSPEMG00000017704Hdlbp9380.321Peromyscus_maniculatus_bairdii
ENSAMXG00000004221hdlbpa9981.787ENSPCIG00000015375HDLBP8781.787Phascolarctos_cinereus
ENSAMXG00000004221hdlbpa10090.686ENSPFOG00000000236hdlbpa9390.686Poecilia_formosa
ENSAMXG00000004221hdlbpa9491.441ENSPLAG00000006033hdlbpa9291.532Poecilia_latipinna
ENSAMXG00000004221hdlbpa10090.517ENSPMEG00000006627hdlbpa9390.601Poecilia_mexicana
ENSAMXG00000004221hdlbpa10064.574ENSPREG00000014450hdlbpa9364.574Poecilia_reticulata
ENSAMXG00000004221hdlbpa9980.152ENSPPYG00000013351HDLBP9380.152Pongo_abelii
ENSAMXG00000004221hdlbpa9974.525ENSPCAG00000011136HDLBP7274.525Procavia_capensis
ENSAMXG00000004221hdlbpa9969.313ENSPCOG00000021622HDLBP9369.313Propithecus_coquereli
ENSAMXG00000004221hdlbpa9979.357ENSPVAG00000000555HDLBP9379.357Pteropus_vampyrus
ENSAMXG00000004221hdlbpa10091.787ENSPNYG00000020753hdlbpa9391.871Pundamilia_nyererei
ENSAMXG00000004221hdlbpa10090.855ENSPNAG00000029610hdlbpa9390.855Pygocentrus_nattereri
ENSAMXG00000004221hdlbpa9945.145ENSRNOG00000031294RGD15631049345.145Rattus_norvegicus
ENSAMXG00000004221hdlbpa9642.637ENSRNOG00000028847AABR07040251.110042.637Rattus_norvegicus
ENSAMXG00000004221hdlbpa9980.068ENSRNOG00000031479Hdlbp9380.068Rattus_norvegicus
ENSAMXG00000004221hdlbpa9842.610ENSRNOG00000042823RGD15612309342.610Rattus_norvegicus
ENSAMXG00000004221hdlbpa9980.321ENSRBIG00000041381HDLBP9380.321Rhinopithecus_bieti
ENSAMXG00000004221hdlbpa9980.321ENSRROG00000034263HDLBP9380.321Rhinopithecus_roxellana
ENSAMXG00000004221hdlbpa9979.966ENSSBOG00000029714-9079.966Saimiri_boliviensis_boliviensis
ENSAMXG00000004221hdlbpa9970.457ENSSBOG00000033067-9670.345Saimiri_boliviensis_boliviensis
ENSAMXG00000004221hdlbpa9981.926ENSSHAG00000012422HDLBP9381.926Sarcophilus_harrisii
ENSAMXG00000004221hdlbpa10091.702ENSSFOG00015018627hdlbp9391.702Scleropages_formosus
ENSAMXG00000004221hdlbpa10091.279ENSSMAG00000002382hdlbpa9291.363Scophthalmus_maximus
ENSAMXG00000004221hdlbpa10092.899ENSSDUG00000022258hdlbpa9392.899Seriola_dumerili
ENSAMXG00000004221hdlbpa10092.815ENSSLDG00000004437hdlbpa9392.815Seriola_lalandi_dorsalis
ENSAMXG00000004221hdlbpa9968.957ENSSARG00000012639HDLBP9368.957Sorex_araneus
ENSAMXG00000004221hdlbpa9981.250ENSSPUG00000009182HDLBP9381.250Sphenodon_punctatus
ENSAMXG00000004221hdlbpa10092.379ENSSPAG00000009145hdlbpa9392.464Stegastes_partitus
ENSAMXG00000004221hdlbpa9979.307ENSSSCG00000016379HDLBP10079.307Sus_scrofa
ENSAMXG00000004221hdlbpa9484.969ENSTGUG00000006189HDLBP9284.969Taeniopygia_guttata
ENSAMXG00000004221hdlbpa10088.898ENSTRUG00000012148hdlbpa9388.898Takifugu_rubripes
ENSAMXG00000004221hdlbpa9989.270ENSTNIG00000004185hdlbpa9389.270Tetraodon_nigroviridis
ENSAMXG00000004221hdlbpa9371.803ENSTBEG00000001860HDLBP8771.803Tupaia_belangeri
ENSAMXG00000004221hdlbpa9983.333ENSTTRG00000015251HDLBP7083.333Tursiops_truncatus
ENSAMXG00000004221hdlbpa9980.828ENSUAMG00000018383HDLBP9281.911Ursus_americanus
ENSAMXG00000004221hdlbpa9980.743ENSUMAG00000010539HDLBP9380.743Ursus_maritimus
ENSAMXG00000004221hdlbpa9456.811ENSVPAG00000003112HDLBP8856.811Vicugna_pacos
ENSAMXG00000004221hdlbpa9482.397ENSVVUG00000022797HDLBP9282.397Vulpes_vulpes
ENSAMXG00000004221hdlbpa9979.628ENSXETG00000012164hdlbp9279.628Xenopus_tropicalis
ENSAMXG00000004221hdlbpa10090.000ENSXCOG00000005943hdlbpa9390.000Xiphophorus_couchianus
ENSAMXG00000004221hdlbpa10090.517ENSXMAG00000003787hdlbpa9290.601Xiphophorus_maculatus

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