EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000004245 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 24982 bases
Position: chr25:27358256-27383237
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000004344	PPR	PF01535.20	1.5e-14	1	2
ENSAMXP00000004344	PPR	PF01535.20	1.5e-14	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000004344	-	1557	-	ENSAMXP00000004344	518 (aa)	-	W5K9T3

Gene Model

Click here to download ENSAMXG00000004245's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000004245's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000004245	-	95	58.893	ENSATEG00000010555	lrpprc	95	59.529	Anabas_testudineus
ENSAMXG00000004245	-	99	56.121	ENSANAG00000027440	LRPPRC	94	57.677	Aotus_nancymaae
ENSAMXG00000004245	-	87	63.519	ENSACLG00000023712	lrpprc	92	63.519	Astatotilapia_calliptera
ENSAMXG00000004245	-	99	55.224	ENSCJAG00000000794	LRPPRC	94	56.335	Callithrix_jacchus
ENSAMXG00000004245	-	99	56.285	ENSCCAG00000031900	LRPPRC	94	57.059	Cebus_capucinus
ENSAMXG00000004245	-	99	56.822	ENSCATG00000014187	LRPPRC	94	58.398	Cercocebus_atys
ENSAMXG00000004245	-	95	55.758	ENSCSEG00000003850	lrpprc	97	55.758	Cynoglossus_semilaevis
ENSAMXG00000004245	-	77	60.244	ENSGGOG00000041704	-	99	60.244	Gorilla_gorilla
ENSAMXG00000004245	-	95	61.100	ENSLBEG00000023225	lrpprc	96	60.913	Labrus_bergylta
ENSAMXG00000004245	-	99	57.009	ENSMFAG00000041560	LRPPRC	94	58.203	Macaca_fascicularis
ENSAMXG00000004245	-	95	57.937	ENSMMUG00000019841	LRPPRC	93	57.843	Macaca_mulatta
ENSAMXG00000004245	-	99	56.636	ENSMNEG00000031613	LRPPRC	94	58.203	Macaca_nemestrina
ENSAMXG00000004245	-	99	55.618	ENSMICG00000010486	LRPPRC	94	56.641	Microcebus_murinus
ENSAMXG00000004245	-	99	58.242	ENSMMOG00000007830	lrpprc	95	59.962	Mola_mola
ENSAMXG00000004245	-	96	59.646	ENSNBRG00000013202	lrpprc	98	59.646	Neolamprologus_brichardi
ENSAMXG00000004245	-	99	55.701	ENSNLEG00000016782	LRPPRC	94	56.836	Nomascus_leucogenys
ENSAMXG00000004245	-	96	59.459	ENSORLG00015018270	lrpprc	93	59.639	Oryzias_latipes_hsok
ENSAMXG00000004245	-	96	59.454	ENSOMEG00000011863	-	99	59.454	Oryzias_melastigma
ENSAMXG00000004245	-	99	55.009	ENSPPAG00000040876	LRPPRC	94	56.778	Pan_paniscus
ENSAMXG00000004245	-	99	54.545	ENSPTRG00000011880	LRPPRC	94	56.445	Pan_troglodytes
ENSAMXG00000004245	-	99	56.636	ENSPANG00000020731	LRPPRC	94	58.203	Papio_anubis
ENSAMXG00000004245	-	95	56.660	ENSPKIG00000022232	lrpprc	97	56.660	Paramormyrops_kingsleyae
ENSAMXG00000004245	-	87	62.931	ENSPMGG00000013171	-	95	62.931	Periophthalmus_magnuspinnatus
ENSAMXG00000004245	-	95	62.076	ENSPNYG00000000756	lrpprc	91	62.661	Pundamilia_nyererei
ENSAMXG00000004245	-	99	56.636	ENSRROG00000042793	-	94	58.203	Rhinopithecus_roxellana
ENSAMXG00000004245	-	99	56.343	ENSSBOG00000011807	LRPPRC	94	57.895	Saimiri_boliviensis_boliviensis
ENSAMXG00000004245	-	95	57.968	ENSSMAG00000016811	-	99	57.968	Scophthalmus_maximus
ENSAMXG00000004245	-	96	57.443	ENSXCOG00000013343	lrpprc	95	57.256	Xiphophorus_couchianus