EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000004249 (Gene tree)
Gene ID: 103033491
Gene Symbol: -
Alias: -
Full Name: ADP-ribosylation factor 4
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 6581 bases
Position: chr18:7830273-7836853
Accession: 103033491
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000004353	MMR_HSR1	PF01926.23	3.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000057044	-	471	-	ENSAMXP00000031153	156 (aa)	-	-
ENSAMXT00000004353	-	3068	XM_007244089	ENSAMXP00000004353	180 (aa)	XP_007244151	W5K9T9

Gene Model

Click here to download ENSAMXG00000004249's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000004249's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000004249	-	97	45.304	ENSAMXG00000006638	arl4aa	91	45.304
ENSAMXG00000004249	-	89	31.395	ENSAMXG00000034192	-	79	31.395
ENSAMXG00000004249	-	100	82.778	ENSAMXG00000019845	arf1	99	82.778
ENSAMXG00000004249	-	100	93.333	ENSAMXG00000031467	arf4a	100	93.333
ENSAMXG00000004249	-	94	35.165	ENSAMXG00000042798	arfrp1	89	35.165
ENSAMXG00000004249	-	95	38.333	ENSAMXG00000035902	ARL6	96	38.547
ENSAMXG00000004249	-	52	36.559	ENSAMXG00000018108	sar1b	67	36.559
ENSAMXG00000004249	-	98	85.311	ENSAMXG00000035742	arf2a	98	85.311
ENSAMXG00000004249	-	100	82.778	ENSAMXG00000037485	arf2b	99	84.971
ENSAMXG00000004249	-	100	58.333	ENSAMXG00000021056	arl1	99	58.333
ENSAMXG00000004249	-	96	31.214	ENSAMXG00000032775	arl8bb	93	31.214
ENSAMXG00000004249	-	97	42.614	ENSAMXG00000018516	arl3l2	94	42.614
ENSAMXG00000004249	-	92	46.108	ENSAMXG00000011499	arl2	93	46.203
ENSAMXG00000004249	-	92	45.455	ENSAMXG00000034370	-	91	45.455
ENSAMXG00000004249	-	100	82.222	ENSAMXG00000016434	arf3a	79	82.222
ENSAMXG00000004249	-	100	45.000	ENSAMXG00000010445	arl8	100	45.000
ENSAMXG00000004249	-	96	46.821	ENSAMXG00000031771	arl5c	96	46.821
ENSAMXG00000004249	-	100	95.556	ENSAMXG00000031774	ARF5	100	95.556
ENSAMXG00000004249	-	91	45.294	ENSAMXG00000025423	arl4ab	89	45.294
ENSAMXG00000004249	-	92	43.030	ENSAMXG00000037720	arl3	91	43.030
ENSAMXG00000004249	-	92	43.452	ENSAMXG00000024897	-	88	43.452
ENSAMXG00000004249	-	100	46.667	ENSAMXG00000011059	arl5a	100	46.667
ENSAMXG00000004249	-	92	32.530	ENSAMXG00000030683	arl8ba	89	32.530
ENSAMXG00000004249	-	100	98.889	ENSAMXG00000038224	-	100	98.889
ENSAMXG00000004249	-	92	42.771	ENSAMXG00000019160	arl3l1	89	42.771
ENSAMXG00000004249	-	90	31.034	ENSAMXG00000044118	srprb	65	31.034
ENSAMXG00000004249	-	99	40.556	ENSAMXG00000012281	arl11	99	40.556
ENSAMXG00000004249	-	92	30.723	ENSAMXG00000039062	arl8a	89	30.723
ENSAMXG00000004249	-	54	34.021	ENSAMXG00000012438	tysnd1	80	34.021
ENSAMXG00000004249	-	92	43.030	ENSAMXG00000043381	zgc:110197	96	43.030
ENSAMXG00000004249	-	96	45.506	ENSAMXG00000024926	arl4cb	93	45.506

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000004249	-	100	93.889	ENSG00000004059	ARF5	100	93.889	Homo_sapiens
ENSAMXG00000004249	-	99	89.944	ENSAPOG00000000667	-	99	89.944	Acanthochromis_polyacanthus
ENSAMXG00000004249	-	100	93.889	ENSAMEG00000004635	ARF5	100	93.889	Ailuropoda_melanoleuca
ENSAMXG00000004249	-	100	95.556	ENSACIG00000005843	arf5	100	95.556	Amphilophus_citrinellus
ENSAMXG00000004249	-	99	92.179	ENSACIG00000000467	-	99	92.179	Amphilophus_citrinellus
ENSAMXG00000004249	-	100	70.556	ENSACIG00000014610	zgc:110286	100	70.556	Amphilophus_citrinellus
ENSAMXG00000004249	-	100	93.889	ENSAOCG00000023329	arf5	100	93.889	Amphiprion_ocellaris
ENSAMXG00000004249	-	99	87.709	ENSAOCG00000008113	-	99	87.709	Amphiprion_ocellaris
ENSAMXG00000004249	-	99	87.709	ENSAPEG00000003087	-	99	87.709	Amphiprion_percula
ENSAMXG00000004249	-	100	93.889	ENSAPEG00000024614	arf5	100	93.889	Amphiprion_percula
ENSAMXG00000004249	-	100	95.000	ENSATEG00000003053	ARF5	100	95.000	Anabas_testudineus
ENSAMXG00000004249	-	99	91.061	ENSATEG00000001302	-	99	91.061	Anabas_testudineus
ENSAMXG00000004249	-	100	93.889	ENSANAG00000026446	ARF5	100	93.889	Aotus_nancymaae
ENSAMXG00000004249	-	100	96.111	ENSACLG00000005705	arf5	100	96.111	Astatotilapia_calliptera
ENSAMXG00000004249	-	99	91.620	ENSACLG00000025604	-	99	91.620	Astatotilapia_calliptera
ENSAMXG00000004249	-	100	93.889	ENSBTAG00000009366	ARF5	100	93.889	Bos_taurus
ENSAMXG00000004249	-	99	88.827	WBGene00000183	arf-3	99	88.827	Caenorhabditis_elegans
ENSAMXG00000004249	-	100	93.889	ENSCJAG00000017604	ARF5	100	93.889	Callithrix_jacchus
ENSAMXG00000004249	-	100	78.972	ENSCAFG00020021629	ARF5	100	78.972	Canis_lupus_dingo
ENSAMXG00000004249	-	100	93.889	ENSCHIG00000018906	ARF5	100	93.889	Capra_hircus
ENSAMXG00000004249	-	100	91.160	ENSCPOG00000006239	ARF5	100	91.160	Cavia_porcellus
ENSAMXG00000004249	-	100	93.889	ENSCCAG00000027943	-	100	93.889	Cebus_capucinus
ENSAMXG00000004249	-	100	93.889	ENSCATG00000010217	ARF5	100	93.889	Cercocebus_atys
ENSAMXG00000004249	-	100	93.889	ENSCLAG00000007930	ARF5	100	93.889	Chinchilla_lanigera
ENSAMXG00000004249	-	100	93.889	ENSCSAG00000010208	ARF5	100	93.889	Chlorocebus_sabaeus
ENSAMXG00000004249	-	99	79.330	ENSCING00000004846	-	99	79.330	Ciona_intestinalis
ENSAMXG00000004249	-	99	77.348	ENSCSAVG00000001959	-	99	77.348	Ciona_savignyi
ENSAMXG00000004249	-	89	93.789	ENSCANG00000037234	ARF5	98	93.789	Colobus_angolensis_palliatus
ENSAMXG00000004249	-	100	93.889	ENSCGRG00001024919	Arf5	100	93.889	Cricetulus_griseus_chok1gshd
ENSAMXG00000004249	-	100	88.889	ENSCSEG00000006004	arf5	100	88.889	Cynoglossus_semilaevis
ENSAMXG00000004249	-	99	92.179	ENSCVAG00000011381	-	99	92.179	Cyprinodon_variegatus
ENSAMXG00000004249	-	100	96.111	ENSCVAG00000009124	ARF5	100	96.111	Cyprinodon_variegatus
ENSAMXG00000004249	-	100	96.111	ENSCVAG00000007314	-	100	96.111	Cyprinodon_variegatus
ENSAMXG00000004249	-	100	98.889	ENSDARG00000113899	zgc:77650	100	98.889	Danio_rerio
ENSAMXG00000004249	-	100	93.333	ENSDARG00000045989	arf4a	100	93.333	Danio_rerio
ENSAMXG00000004249	-	100	72.376	ENSDARG00000074210	ARF5	89	72.376	Danio_rerio
ENSAMXG00000004249	-	100	99.444	ENSDARG00000070472	arf5	100	99.444	Danio_rerio
ENSAMXG00000004249	-	100	93.889	ENSDORG00000000325	Arf5	100	93.889	Dipodomys_ordii
ENSAMXG00000004249	-	100	86.111	FBgn0013749	Arf102F	100	86.111	Drosophila_melanogaster
ENSAMXG00000004249	-	97	90.857	ENSETEG00000009275	ARF5	100	90.857	Echinops_telfairi
ENSAMXG00000004249	-	100	86.111	ENSEBUG00000014420	-	100	86.111	Eptatretus_burgeri
ENSAMXG00000004249	-	99	69.832	ENSEBUG00000004484	-	99	69.832	Eptatretus_burgeri
ENSAMXG00000004249	-	99	75.419	ENSELUG00000014428	arf4	99	75.419	Esox_lucius
ENSAMXG00000004249	-	100	93.889	ENSFCAG00000005482	ARF5	100	93.889	Felis_catus
ENSAMXG00000004249	-	100	95.556	ENSFHEG00000023119	arf5	100	95.556	Fundulus_heteroclitus
ENSAMXG00000004249	-	100	90.000	ENSGMOG00000008747	arf5	100	90.000	Gadus_morhua
ENSAMXG00000004249	-	100	91.667	ENSGMOG00000019109	-	99	91.667	Gadus_morhua
ENSAMXG00000004249	-	100	96.111	ENSGAFG00000018703	arf5	100	96.111	Gambusia_affinis
ENSAMXG00000004249	-	99	91.061	ENSGAFG00000005163	-	99	91.061	Gambusia_affinis
ENSAMXG00000004249	-	100	94.444	ENSGACG00000000686	arf5	100	94.444	Gasterosteus_aculeatus
ENSAMXG00000004249	-	99	87.709	ENSGACG00000012500	-	99	87.709	Gasterosteus_aculeatus
ENSAMXG00000004249	-	100	93.889	ENSGAGG00000000231	ARF5	100	93.889	Gopherus_agassizii
ENSAMXG00000004249	-	100	93.889	ENSGGOG00000016749	ARF5	100	93.889	Gorilla_gorilla
ENSAMXG00000004249	-	100	96.111	ENSHBUG00000008546	arf5	100	96.111	Haplochromis_burtoni
ENSAMXG00000004249	-	99	91.620	ENSHBUG00000011041	-	99	91.620	Haplochromis_burtoni
ENSAMXG00000004249	-	100	93.889	ENSHGLG00000007494	ARF5	100	93.889	Heterocephalus_glaber_female
ENSAMXG00000004249	-	100	92.778	ENSHGLG00100006040	ARF5	60	92.778	Heterocephalus_glaber_male
ENSAMXG00000004249	-	99	86.592	ENSHCOG00000015577	-	100	86.592	Hippocampus_comes
ENSAMXG00000004249	-	100	96.667	ENSIPUG00000004215	arf5	100	96.667	Ictalurus_punctatus
ENSAMXG00000004249	-	100	95.000	ENSIPUG00000007016	arf4	100	95.000	Ictalurus_punctatus
ENSAMXG00000004249	-	100	72.222	ENSIPUG00000006913	-	70	72.222	Ictalurus_punctatus
ENSAMXG00000004249	-	100	97.778	ENSIPUG00000004159	Arf5	100	97.778	Ictalurus_punctatus
ENSAMXG00000004249	-	100	93.889	ENSSTOG00000002104	ARF5	100	93.889	Ictidomys_tridecemlineatus
ENSAMXG00000004249	-	100	93.889	ENSJJAG00000005105	Arf5	100	93.889	Jaculus_jaculus
ENSAMXG00000004249	-	99	92.179	ENSKMAG00000012816	-	99	92.179	Kryptolebias_marmoratus
ENSAMXG00000004249	-	100	86.667	ENSLBEG00000012002	-	99	86.667	Labrus_bergylta
ENSAMXG00000004249	-	100	93.889	ENSLBEG00000026532	arf5	100	93.889	Labrus_bergylta
ENSAMXG00000004249	-	100	93.889	ENSLAFG00000011469	ARF5	100	93.889	Loxodonta_africana
ENSAMXG00000004249	-	100	93.889	ENSMFAG00000019772	ARF5	100	93.889	Macaca_fascicularis
ENSAMXG00000004249	-	100	93.889	ENSMMUG00000046381	ARF5	100	93.889	Macaca_mulatta
ENSAMXG00000004249	-	100	93.889	ENSMNEG00000040893	ARF5	100	93.889	Macaca_nemestrina
ENSAMXG00000004249	-	100	94.444	ENSMAMG00000021160	arf5	100	94.444	Mastacembelus_armatus
ENSAMXG00000004249	-	99	90.503	ENSMAMG00000008223	-	99	90.503	Mastacembelus_armatus
ENSAMXG00000004249	-	87	91.083	ENSMZEG00005019741	-	93	91.083	Maylandia_zebra
ENSAMXG00000004249	-	100	96.111	ENSMZEG00005015033	arf5	67	96.111	Maylandia_zebra
ENSAMXG00000004249	-	100	93.889	ENSMAUG00000014825	Arf5	100	93.889	Mesocricetus_auratus
ENSAMXG00000004249	-	100	93.889	ENSMICG00000000091	ARF5	100	93.889	Microcebus_murinus
ENSAMXG00000004249	-	100	93.889	ENSMOCG00000022861	Arf5	100	93.889	Microtus_ochrogaster
ENSAMXG00000004249	-	100	93.333	ENSMODG00000015229	ARF5	100	93.333	Monodelphis_domestica
ENSAMXG00000004249	-	99	69.832	ENSMALG00000022638	zgc:110286	100	69.832	Monopterus_albus
ENSAMXG00000004249	-	100	95.000	ENSMALG00000010117	-	100	95.000	Monopterus_albus
ENSAMXG00000004249	-	99	91.061	ENSMALG00000006020	-	99	91.061	Monopterus_albus
ENSAMXG00000004249	-	100	93.889	MGP_CAROLIEiJ_G0028156	Arf5	100	93.889	Mus_caroli
ENSAMXG00000004249	-	100	93.889	ENSMUSG00000020440	Arf5	100	93.889	Mus_musculus
ENSAMXG00000004249	-	100	93.889	MGP_PahariEiJ_G0021914	Arf5	100	93.889	Mus_pahari
ENSAMXG00000004249	-	100	93.889	MGP_SPRETEiJ_G0029156	Arf5	100	93.889	Mus_spretus
ENSAMXG00000004249	-	100	93.889	ENSMPUG00000006675	ARF5	100	93.889	Mustela_putorius_furo
ENSAMXG00000004249	-	100	93.889	ENSMLUG00000017122	ARF5	100	93.889	Myotis_lucifugus
ENSAMXG00000004249	-	100	93.889	ENSNGAG00000011743	Arf5	100	93.889	Nannospalax_galili
ENSAMXG00000004249	-	100	96.111	ENSNBRG00000018854	arf5	100	96.111	Neolamprologus_brichardi
ENSAMXG00000004249	-	100	93.889	ENSODEG00000011800	ARF5	100	93.889	Octodon_degus
ENSAMXG00000004249	-	99	91.620	ENSONIG00000014890	-	99	91.620	Oreochromis_niloticus
ENSAMXG00000004249	-	100	96.111	ENSONIG00000007594	arf5	100	96.111	Oreochromis_niloticus
ENSAMXG00000004249	-	100	93.889	ENSOCUG00000024365	ARF5	100	93.889	Oryctolagus_cuniculus
ENSAMXG00000004249	-	99	91.620	ENSORLG00020001755	-	99	91.620	Oryzias_latipes_hni
ENSAMXG00000004249	-	99	91.620	ENSOMEG00000000211	-	64	91.620	Oryzias_melastigma
ENSAMXG00000004249	-	100	95.556	ENSOMEG00000020821	ARF5	100	95.556	Oryzias_melastigma
ENSAMXG00000004249	-	100	93.889	ENSOGAG00000013336	ARF5	100	93.889	Otolemur_garnettii
ENSAMXG00000004249	-	100	93.889	ENSPPAG00000037755	ARF5	100	93.889	Pan_paniscus
ENSAMXG00000004249	-	100	93.889	ENSPPRG00000004674	ARF5	100	93.889	Panthera_pardus
ENSAMXG00000004249	-	100	93.889	ENSPTRG00000019651	ARF5	100	93.889	Pan_troglodytes
ENSAMXG00000004249	-	100	93.889	ENSPANG00000032970	ARF5	100	93.889	Papio_anubis
ENSAMXG00000004249	-	100	94.444	ENSPKIG00000013814	-	100	94.444	Paramormyrops_kingsleyae
ENSAMXG00000004249	-	100	93.333	ENSPKIG00000025349	arf4a	100	93.333	Paramormyrops_kingsleyae
ENSAMXG00000004249	-	100	95.000	ENSPKIG00000025381	-	100	95.000	Paramormyrops_kingsleyae
ENSAMXG00000004249	-	100	88.333	ENSPMGG00000009985	-	100	88.333	Periophthalmus_magnuspinnatus
ENSAMXG00000004249	-	100	93.889	ENSPEMG00000021476	Arf5	100	93.889	Peromyscus_maniculatus_bairdii
ENSAMXG00000004249	-	99	82.123	ENSPMAG00000009600	arf4a	100	82.123	Petromyzon_marinus
ENSAMXG00000004249	-	100	96.111	ENSPFOG00000015817	arf5	100	96.111	Poecilia_formosa
ENSAMXG00000004249	-	99	90.556	ENSPFOG00000017992	-	99	90.556	Poecilia_formosa
ENSAMXG00000004249	-	100	96.111	ENSPLAG00000006742	arf5	100	96.111	Poecilia_latipinna
ENSAMXG00000004249	-	99	91.061	ENSPLAG00000015630	-	99	91.061	Poecilia_latipinna
ENSAMXG00000004249	-	99	91.061	ENSPMEG00000004624	-	99	91.061	Poecilia_mexicana
ENSAMXG00000004249	-	100	96.111	ENSPMEG00000009605	arf5	100	96.111	Poecilia_mexicana
ENSAMXG00000004249	-	100	93.889	ENSPCOG00000027640	ARF5	100	93.889	Propithecus_coquereli
ENSAMXG00000004249	-	100	93.889	ENSPVAG00000013940	ARF5	100	93.889	Pteropus_vampyrus
ENSAMXG00000004249	-	100	96.111	ENSPNYG00000001663	arf5	100	96.111	Pundamilia_nyererei
ENSAMXG00000004249	-	99	91.620	ENSPNYG00000004931	-	99	91.620	Pundamilia_nyererei
ENSAMXG00000004249	-	100	93.333	ENSPNAG00000004745	arf4a	100	93.333	Pygocentrus_nattereri
ENSAMXG00000004249	-	100	98.889	ENSPNAG00000024427	-	100	98.889	Pygocentrus_nattereri
ENSAMXG00000004249	-	100	74.444	ENSPNAG00000005054	-	100	74.444	Pygocentrus_nattereri
ENSAMXG00000004249	-	100	72.222	ENSPNAG00000004475	-	100	72.222	Pygocentrus_nattereri
ENSAMXG00000004249	-	100	93.889	ENSRNOG00000007806	Arf5	100	93.889	Rattus_norvegicus
ENSAMXG00000004249	-	100	93.889	ENSRBIG00000039868	ARF5	100	93.889	Rhinopithecus_bieti
ENSAMXG00000004249	-	100	93.889	ENSRROG00000041157	ARF5	100	93.889	Rhinopithecus_roxellana
ENSAMXG00000004249	-	100	93.889	ENSSBOG00000021669	ARF5	100	93.889	Saimiri_boliviensis_boliviensis
ENSAMXG00000004249	-	100	93.889	ENSSHAG00000015053	ARF5	100	93.889	Sarcophilus_harrisii
ENSAMXG00000004249	-	100	82.778	ENSSFOG00015007701	-	100	82.778	Scleropages_formosus
ENSAMXG00000004249	-	100	95.556	ENSSFOG00015020707	ARF5	100	95.556	Scleropages_formosus
ENSAMXG00000004249	-	99	87.709	ENSSMAG00000004541	-	99	87.709	Scophthalmus_maximus
ENSAMXG00000004249	-	100	93.889	ENSSMAG00000011361	arf5	100	93.889	Scophthalmus_maximus
ENSAMXG00000004249	-	100	95.000	ENSSDUG00000005105	arf5	100	95.000	Seriola_dumerili
ENSAMXG00000004249	-	100	95.000	ENSSLDG00000017188	arf5	100	95.000	Seriola_lalandi_dorsalis
ENSAMXG00000004249	-	99	91.620	ENSSPAG00000022680	-	99	91.620	Stegastes_partitus
ENSAMXG00000004249	-	100	93.889	ENSSPAG00000014434	arf5	100	93.889	Stegastes_partitus
ENSAMXG00000004249	-	100	93.889	ENSSSCG00000016593	ARF5	100	93.889	Sus_scrofa
ENSAMXG00000004249	-	99	85.475	ENSTRUG00000025462	-	100	85.475	Takifugu_rubripes
ENSAMXG00000004249	-	99	84.916	ENSTNIG00000017954	-	100	84.916	Tetraodon_nigroviridis
ENSAMXG00000004249	-	99	93.855	ENSTNIG00000003348	arf5	100	93.855	Tetraodon_nigroviridis
ENSAMXG00000004249	-	90	95.062	ENSTTRG00000006043	ARF5	100	95.062	Tursiops_truncatus
ENSAMXG00000004249	-	100	93.889	ENSUAMG00000012982	ARF5	100	93.889	Ursus_americanus
ENSAMXG00000004249	-	100	93.889	ENSVVUG00000007062	ARF5	100	93.889	Vulpes_vulpes
ENSAMXG00000004249	-	99	91.061	ENSXCOG00000020384	-	99	91.061	Xiphophorus_couchianus
ENSAMXG00000004249	-	100	96.111	ENSXMAG00000015306	arf5	100	96.111	Xiphophorus_maculatus
ENSAMXG00000004249	-	99	91.061	ENSXMAG00000004558	-	99	91.061	Xiphophorus_maculatus