EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000004340 (Gene tree)
Gene ID: 103031340
Gene Symbol: zfhx3
Alias: fd23d06|fj32b02|im:7148790|wu:fd23d06|wu:fj32b02
Full Name: zinc finger homeobox 3
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 359497 bases
Position: chr5:35913195-36272691
Accession: 103031340
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000045770	zf-met	PF12874.7	1.4e-10	1	1
ENSAMXP00000004458	zf-met	PF12874.7	1.7e-10	1	1
ENSAMXP00000040950	zf-met	PF12874.7	1.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000054211	-	12227	XM_022670080	ENSAMXP00000040950	3870 (aa)	XP_022525801	UPI000BBDCB24
ENSAMXT00000004458	-	11746	XM_007256389	ENSAMXP00000004458	3870 (aa)	XP_007256451	W5KA47
ENSAMXT00000043028	-	12119	XM_022670083	ENSAMXP00000045770	3834 (aa)	XP_022525804	UPI000BBDD206

Gene Model

Click here to download ENSAMXG00000004340's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000004340's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000004340	zfhx3	100	63.033	ENSG00000140836	ZFHX3	100	66.233	Homo_sapiens
ENSAMXG00000004340	zfhx3	100	82.380	ENSAPOG00000010102	zfhx3	100	82.676	Acanthochromis_polyacanthus
ENSAMXG00000004340	zfhx3	96	65.233	ENSAMEG00000002197	ZFHX3	97	64.793	Ailuropoda_melanoleuca
ENSAMXG00000004340	zfhx3	100	81.388	ENSACIG00000000652	zfhx3	97	87.161	Amphilophus_citrinellus
ENSAMXG00000004340	zfhx3	100	82.074	ENSAPEG00000011530	zfhx3	100	82.651	Amphiprion_percula
ENSAMXG00000004340	zfhx3	100	82.149	ENSATEG00000004640	zfhx3	100	81.944	Anabas_testudineus
ENSAMXG00000004340	zfhx3	92	65.015	ENSAPLG00000002327	ZFHX3	98	64.704	Anas_platyrhynchos
ENSAMXG00000004340	zfhx3	100	62.780	ENSANAG00000033325	ZFHX3	97	64.321	Aotus_nancymaae
ENSAMXG00000004340	zfhx3	100	81.362	ENSACLG00000001914	zfhx3	100	80.863	Astatotilapia_calliptera
ENSAMXG00000004340	zfhx3	95	64.481	ENSBTAG00000014636	ZFHX3	61	64.963	Bos_taurus
ENSAMXG00000004340	zfhx3	100	62.859	ENSCJAG00000043080	ZFHX3	97	64.354	Callithrix_jacchus
ENSAMXG00000004340	zfhx3	96	65.152	ENSCAFG00000020243	ZFHX3	97	64.963	Canis_familiaris
ENSAMXG00000004340	zfhx3	96	65.262	ENSCAFG00020020336	ZFHX3	97	65.127	Canis_lupus_dingo
ENSAMXG00000004340	zfhx3	96	64.162	ENSCHIG00000018446	ZFHX3	61	64.716	Capra_hircus
ENSAMXG00000004340	zfhx3	100	62.766	ENSTSYG00000029930	ZFHX3	61	65.504	Carlito_syrichta
ENSAMXG00000004340	zfhx3	89	65.470	ENSCAPG00000010889	ZFHX3	96	64.514	Cavia_aperea
ENSAMXG00000004340	zfhx3	91	65.745	ENSCPOG00000009111	ZFHX3	97	64.189	Cavia_porcellus
ENSAMXG00000004340	zfhx3	66	63.140	ENSCCAG00000026346	ZFHX3	96	67.055	Cebus_capucinus
ENSAMXG00000004340	zfhx3	100	63.166	ENSCATG00000022545	ZFHX3	61	65.663	Cercocebus_atys
ENSAMXG00000004340	zfhx3	95	64.511	ENSCLAG00000007000	ZFHX3	62	65.266	Chinchilla_lanigera
ENSAMXG00000004340	zfhx3	100	62.854	ENSCSAG00000004171	ZFHX3	97	64.878	Chlorocebus_sabaeus
ENSAMXG00000004340	zfhx3	100	63.204	ENSCANG00000034216	ZFHX3	97	64.393	Colobus_angolensis_palliatus
ENSAMXG00000004340	zfhx3	100	62.698	ENSCGRG00001012831	Zfhx3	61	64.913	Cricetulus_griseus_chok1gshd
ENSAMXG00000004340	zfhx3	100	62.245	ENSCGRG00000001001	Zfhx3	61	64.209	Cricetulus_griseus_crigri
ENSAMXG00000004340	zfhx3	100	79.406	ENSCSEG00000001762	zfhx3	100	79.241	Cynoglossus_semilaevis
ENSAMXG00000004340	zfhx3	100	79.862	ENSCVAG00000000602	zfhx3	100	79.826	Cyprinodon_variegatus
ENSAMXG00000004340	zfhx3	100	86.830	ENSDARG00000103057	zfhx3	100	86.675	Danio_rerio
ENSAMXG00000004340	zfhx3	96	64.846	ENSDNOG00000046047	ZFHX3	97	64.573	Dasypus_novemcinctus
ENSAMXG00000004340	zfhx3	100	63.739	ENSEASG00005021387	ZFHX3	61	65.476	Equus_asinus_asinus
ENSAMXG00000004340	zfhx3	100	63.698	ENSECAG00000022984	ZFHX3	73	65.503	Equus_caballus
ENSAMXG00000004340	zfhx3	82	68.643	ENSEEUG00000008705	ZFHX3	92	67.176	Erinaceus_europaeus
ENSAMXG00000004340	zfhx3	100	83.321	ENSELUG00000014311	zfhx3	100	82.457	Esox_lucius
ENSAMXG00000004340	zfhx3	96	65.179	ENSFCAG00000023839	ZFHX3	97	65.004	Felis_catus
ENSAMXG00000004340	zfhx3	94	66.016	ENSFALG00000002706	ZFHX3	84	67.440	Ficedula_albicollis
ENSAMXG00000004340	zfhx3	92	66.626	ENSFDAG00000015753	ZFHX3	97	63.144	Fukomys_damarensis
ENSAMXG00000004340	zfhx3	100	80.230	ENSFHEG00000013474	zfhx3	97	83.853	Fundulus_heteroclitus
ENSAMXG00000004340	zfhx3	100	79.394	ENSGMOG00000002909	zfhx3	100	78.951	Gadus_morhua
ENSAMXG00000004340	zfhx3	100	80.230	ENSGAFG00000017278	zfhx3	100	80.067	Gambusia_affinis
ENSAMXG00000004340	zfhx3	100	78.639	ENSGACG00000015779	zfhx3	100	78.106	Gasterosteus_aculeatus
ENSAMXG00000004340	zfhx3	100	62.583	ENSGAGG00000002102	ZFHX3	62	65.842	Gopherus_agassizii
ENSAMXG00000004340	zfhx3	95	63.610	ENSGGOG00000012083	ZFHX3	93	65.393	Gorilla_gorilla
ENSAMXG00000004340	zfhx3	100	81.414	ENSHBUG00000013200	zfhx3	100	81.094	Haplochromis_burtoni
ENSAMXG00000004340	zfhx3	100	62.080	ENSHGLG00000012541	ZFHX3	50	65.869	Heterocephalus_glaber_female
ENSAMXG00000004340	zfhx3	100	61.967	ENSHGLG00100000797	ZFHX3	50	65.770	Heterocephalus_glaber_male
ENSAMXG00000004340	zfhx3	100	79.610	ENSHCOG00000003135	zfhx3	100	79.235	Hippocampus_comes
ENSAMXG00000004340	zfhx3	100	90.026	ENSIPUG00000006119	zfhx3	100	89.794	Ictalurus_punctatus
ENSAMXG00000004340	zfhx3	100	63.288	ENSSTOG00000027206	ZFHX3	97	64.244	Ictidomys_tridecemlineatus
ENSAMXG00000004340	zfhx3	100	81.480	ENSKMAG00000006781	zfhx3	100	81.258	Kryptolebias_marmoratus
ENSAMXG00000004340	zfhx3	100	81.242	ENSLBEG00000026326	zfhx3	100	80.580	Labrus_bergylta
ENSAMXG00000004340	zfhx3	100	79.823	ENSLOCG00000004206	zfhx3	100	78.958	Lepisosteus_oculatus
ENSAMXG00000004340	zfhx3	100	63.423	ENSLAFG00000017476	ZFHX3	97	64.806	Loxodonta_africana
ENSAMXG00000004340	zfhx3	100	63.354	ENSMFAG00000034225	ZFHX3	97	64.958	Macaca_fascicularis
ENSAMXG00000004340	zfhx3	100	63.329	ENSMMUG00000021041	ZFHX3	97	64.539	Macaca_mulatta
ENSAMXG00000004340	zfhx3	100	63.329	ENSMNEG00000030137	ZFHX3	97	64.931	Macaca_nemestrina
ENSAMXG00000004340	zfhx3	100	62.984	ENSMLEG00000042563	ZFHX3	97	64.518	Mandrillus_leucophaeus
ENSAMXG00000004340	zfhx3	100	82.353	ENSMAMG00000021509	zfhx3	100	82.302	Mastacembelus_armatus
ENSAMXG00000004340	zfhx3	100	81.337	ENSMZEG00005014216	zfhx3	100	81.017	Maylandia_zebra
ENSAMXG00000004340	zfhx3	77	68.524	ENSMGAG00000008764	ZFHX3	97	68.414	Meleagris_gallopavo
ENSAMXG00000004340	zfhx3	56	59.328	ENSMAUG00000000602	Zfhx3	97	64.202	Mesocricetus_auratus
ENSAMXG00000004340	zfhx3	95	65.207	ENSMICG00000003537	ZFHX3	63	68.056	Microcebus_murinus
ENSAMXG00000004340	zfhx3	100	63.007	ENSMOCG00000017998	Zfhx3	86	66.034	Microtus_ochrogaster
ENSAMXG00000004340	zfhx3	100	81.366	ENSMMOG00000016551	zfhx3	100	81.277	Mola_mola
ENSAMXG00000004340	zfhx3	100	81.886	ENSMALG00000021055	zfhx3	100	81.886	Monopterus_albus
ENSAMXG00000004340	zfhx3	56	61.111	ENSMUSG00000038872	Zfhx3	61	66.059	Mus_musculus
ENSAMXG00000004340	zfhx3	56	61.082	MGP_PahariEiJ_G0023139	Zfhx3	61	66.267	Mus_pahari
ENSAMXG00000004340	zfhx3	56	61.210	MGP_SPRETEiJ_G0032657	Zfhx3	61	66.100	Mus_spretus
ENSAMXG00000004340	zfhx3	54	64.498	ENSMPUG00000007747	ZFHX3	55	64.915	Mustela_putorius_furo
ENSAMXG00000004340	zfhx3	95	65.132	ENSMLUG00000016100	ZFHX3	86	65.710	Myotis_lucifugus
ENSAMXG00000004340	zfhx3	95	64.392	ENSNGAG00000001724	Zfhx3	97	63.847	Nannospalax_galili
ENSAMXG00000004340	zfhx3	100	81.276	ENSNBRG00000010822	zfhx3	100	81.085	Neolamprologus_brichardi
ENSAMXG00000004340	zfhx3	84	81.720	ENSNLEG00000032567	ZFHX3	93	81.720	Nomascus_leucogenys
ENSAMXG00000004340	zfhx3	51	60.967	ENSODEG00000014257	ZFHX3	52	66.900	Octodon_degus
ENSAMXG00000004340	zfhx3	69	81.471	ENSONIG00000005914	zfhx3	99	83.072	Oreochromis_niloticus
ENSAMXG00000004340	zfhx3	86	64.957	ENSOANG00000005084	ZFHX3	86	65.979	Ornithorhynchus_anatinus
ENSAMXG00000004340	zfhx3	86	66.225	ENSOCUG00000017910	-	58	67.580	Oryctolagus_cuniculus
ENSAMXG00000004340	zfhx3	100	79.555	ENSORLG00000007874	zfhx3	100	78.595	Oryzias_latipes
ENSAMXG00000004340	zfhx3	100	79.734	ENSORLG00020009729	zfhx3	100	78.621	Oryzias_latipes_hni
ENSAMXG00000004340	zfhx3	100	79.468	ENSORLG00015007912	zfhx3	100	78.891	Oryzias_latipes_hsok
ENSAMXG00000004340	zfhx3	100	80.107	ENSOMEG00000001800	zfhx3	100	79.187	Oryzias_melastigma
ENSAMXG00000004340	zfhx3	96	64.100	ENSPPRG00000005184	ZFHX3	97	64.060	Panthera_pardus
ENSAMXG00000004340	zfhx3	100	63.133	ENSPTRG00000008340	ZFHX3	97	64.560	Pan_troglodytes
ENSAMXG00000004340	zfhx3	100	63.386	ENSPANG00000010456	ZFHX3	97	64.966	Papio_anubis
ENSAMXG00000004340	zfhx3	96	79.064	ENSPKIG00000009598	zfhx3	98	78.302	Paramormyrops_kingsleyae
ENSAMXG00000004340	zfhx3	99	75.748	ENSPKIG00000001525	-	100	75.128	Paramormyrops_kingsleyae
ENSAMXG00000004340	zfhx3	100	79.045	ENSPMGG00000006062	zfhx3	99	81.975	Periophthalmus_magnuspinnatus
ENSAMXG00000004340	zfhx3	100	62.985	ENSPEMG00000010630	Zfhx3	97	64.314	Peromyscus_maniculatus_bairdii
ENSAMXG00000004340	zfhx3	100	80.374	ENSPFOG00000001702	zfhx3	100	80.246	Poecilia_formosa
ENSAMXG00000004340	zfhx3	100	80.442	ENSPLAG00000018955	zfhx3	100	80.442	Poecilia_latipinna
ENSAMXG00000004340	zfhx3	100	80.348	ENSPMEG00000022333	zfhx3	100	80.118	Poecilia_mexicana
ENSAMXG00000004340	zfhx3	100	80.360	ENSPREG00000023212	zfhx3	100	80.262	Poecilia_reticulata
ENSAMXG00000004340	zfhx3	84	66.996	ENSPPYG00000007513	ZFHX3	99	65.875	Pongo_abelii
ENSAMXG00000004340	zfhx3	86	64.610	ENSPCAG00000010600	ZFHX3	58	68.329	Procavia_capensis
ENSAMXG00000004340	zfhx3	95	65.575	ENSPCOG00000025382	ZFHX3	61	66.333	Propithecus_coquereli
ENSAMXG00000004340	zfhx3	96	65.005	ENSPVAG00000006664	ZFHX3	88	67.542	Pteropus_vampyrus
ENSAMXG00000004340	zfhx3	100	81.364	ENSPNYG00000013409	zfhx3	100	81.019	Pundamilia_nyererei
ENSAMXG00000004340	zfhx3	100	63.304	ENSRNOG00000014452	Zfhx3	61	66.116	Rattus_norvegicus
ENSAMXG00000004340	zfhx3	100	62.691	ENSRBIG00000031579	ZFHX3	97	63.865	Rhinopithecus_bieti
ENSAMXG00000004340	zfhx3	100	63.184	ENSRROG00000039904	ZFHX3	97	64.467	Rhinopithecus_roxellana
ENSAMXG00000004340	zfhx3	91	63.897	ENSSBOG00000034332	ZFHX3	92	66.170	Saimiri_boliviensis_boliviensis
ENSAMXG00000004340	zfhx3	100	78.743	ENSSFOG00015014986	zfhx3	99	79.890	Scleropages_formosus
ENSAMXG00000004340	zfhx3	100	77.133	ENSSFOG00015019511	zfhx3	99	77.328	Scleropages_formosus
ENSAMXG00000004340	zfhx3	100	80.915	ENSSMAG00000000110	zfhx3	100	80.340	Scophthalmus_maximus
ENSAMXG00000004340	zfhx3	95	89.655	ENSSDUG00000017102	zfhx3	100	83.446	Seriola_dumerili
ENSAMXG00000004340	zfhx3	100	82.547	ENSSLDG00000013212	zfhx3	100	82.279	Seriola_lalandi_dorsalis
ENSAMXG00000004340	zfhx3	100	82.072	ENSSPAG00000002113	zfhx3	100	81.958	Stegastes_partitus
ENSAMXG00000004340	zfhx3	95	65.595	ENSSSCG00000002752	ZFHX3	96	64.717	Sus_scrofa
ENSAMXG00000004340	zfhx3	95	62.349	ENSTGUG00000008190	ZFHX3	90	64.514	Taeniopygia_guttata
ENSAMXG00000004340	zfhx3	100	79.246	ENSTRUG00000017601	zfhx3	100	78.647	Takifugu_rubripes
ENSAMXG00000004340	zfhx3	100	63.360	ENSVVUG00000017344	ZFHX3	97	64.851	Vulpes_vulpes
ENSAMXG00000004340	zfhx3	100	80.697	ENSXMAG00000027288	zfhx3	100	80.220	Xiphophorus_maculatus