EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000004457 (Gene tree)
Gene ID: 103021425
Gene Symbol: ddx43
Alias: zgc:174910
Full Name: DEAD-box helicase 43
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 16375 bases
Position: chr25:16116034-16132408
Accession: 103021425
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000046806	KH_1	PF00013.29	1.3e-14	1	1
ENSAMXP00000004582	KH_1	PF00013.29	2.3e-14	1	1
ENSAMXP00000046806	DEAD	PF00270.29	3.1e-42	1	1
ENSAMXP00000004582	DEAD	PF00270.29	4.4e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000053706	-	1803	-	ENSAMXP00000046806	600 (aa)	-	-
ENSAMXT00000004582	-	2401	XM_022684690	ENSAMXP00000004582	730 (aa)	XP_022540411	W5KAH1

Gene Model

Click here to download ENSAMXG00000004457's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000004457's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000004457	ddx43	62	43.317	ENSAMXG00000004466	ddx5	71	43.973
ENSAMXG00000004457	ddx43	51	33.531	ENSAMXG00000016919	ddx49	77	33.333
ENSAMXG00000004457	ddx43	53	40.152	ENSAMXG00000002956	DDX41	63	40.513
ENSAMXG00000004457	ddx43	54	38.920	ENSAMXG00000010288	ddx4	59	39.433
ENSAMXG00000004457	ddx43	51	31.498	ENSAMXG00000032542	ddx61	69	32.659
ENSAMXG00000004457	ddx43	54	32.194	ENSAMXG00000020882	eif4a3	92	32.880
ENSAMXG00000004457	ddx43	51	30.319	ENSAMXG00000017837	ddx39b	84	30.376
ENSAMXG00000004457	ddx43	61	31.209	ENSAMXG00000035102	ddx59	64	31.377
ENSAMXG00000004457	ddx43	50	32.418	ENSAMXG00000030251	eif4a1a	88	32.418
ENSAMXG00000004457	ddx43	70	40.940	ENSAMXG00000015550	DDX5	89	42.217
ENSAMXG00000004457	ddx43	50	32.320	ENSAMXG00000040730	eif4a1b	87	32.320
ENSAMXG00000004457	ddx43	58	41.071	ENSAMXG00000032415	ddx3xa	56	41.523
ENSAMXG00000004457	ddx43	55	43.133	ENSAMXG00000013396	ddx3xb	63	43.750
ENSAMXG00000004457	ddx43	51	31.498	ENSAMXG00000019553	ddx6	70	32.659
ENSAMXG00000004457	ddx43	55	34.615	ENSAMXG00000024377	ddx52	65	34.615
ENSAMXG00000004457	ddx43	51	32.181	ENSAMXG00000015256	-	85	32.258
ENSAMXG00000004457	ddx43	51	37.879	ENSAMXG00000000911	ddx27	50	37.596
ENSAMXG00000004457	ddx43	58	37.327	ENSAMXG00000010727	ddx47	80	38.462
ENSAMXG00000004457	ddx43	53	32.493	ENSAMXG00000042612	-	75	33.239
ENSAMXG00000004457	ddx43	51	31.098	ENSAMXG00000033980	-	68	31.988
ENSAMXG00000004457	ddx43	51	31.117	ENSAMXG00000018631	DDX39A	85	31.183
ENSAMXG00000004457	ddx43	53	40.751	ENSAMXG00000017597	ddx23	51	41.304
ENSAMXG00000004457	ddx43	50	32.817	ENSAMXG00000019126	eif4a2	87	32.692

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000004457	ddx43	93	65.903	ENSAPOG00000001712	ddx43	94	65.280	Acanthochromis_polyacanthus
ENSAMXG00000004457	ddx43	95	57.204	ENSACIG00000012170	ddx43	97	56.223	Amphilophus_citrinellus
ENSAMXG00000004457	ddx43	93	69.666	ENSAOCG00000001331	ddx43	93	68.398	Amphiprion_ocellaris
ENSAMXG00000004457	ddx43	93	69.853	ENSAPEG00000001133	ddx43	91	69.412	Amphiprion_percula
ENSAMXG00000004457	ddx43	92	69.514	ENSATEG00000012664	ddx43	95	68.538	Anabas_testudineus
ENSAMXG00000004457	ddx43	76	67.631	ENSAPLG00000010182	-	96	73.650	Anas_platyrhynchos
ENSAMXG00000004457	ddx43	94	59.339	ENSACAG00000004387	-	97	59.710	Anolis_carolinensis
ENSAMXG00000004457	ddx43	93	67.201	ENSACLG00000026081	ddx43	96	66.181	Astatotilapia_calliptera
ENSAMXG00000004457	ddx43	63	48.418	WBGene00013214	Y54G11A.3	90	48.684	Caenorhabditis_elegans
ENSAMXG00000004457	ddx43	61	60.106	ENSCSEG00000000532	ddx43	98	57.252	Cynoglossus_semilaevis
ENSAMXG00000004457	ddx43	95	62.226	ENSCVAG00000009980	ddx43	93	61.383	Cyprinodon_variegatus
ENSAMXG00000004457	ddx43	93	72.938	ENSDARG00000022614	ddx43	94	73.139	Danio_rerio
ENSAMXG00000004457	ddx43	92	47.384	FBgn0037549	CG7878	85	49.916	Drosophila_melanogaster
ENSAMXG00000004457	ddx43	74	43.737	ENSETEG00000014626	-	97	45.905	Echinops_telfairi
ENSAMXG00000004457	ddx43	58	48.988	ENSETEG00000019547	-	69	48.106	Echinops_telfairi
ENSAMXG00000004457	ddx43	93	70.882	ENSELUG00000012126	ddx43	96	70.191	Esox_lucius
ENSAMXG00000004457	ddx43	93	61.982	ENSFALG00000007042	-	84	68.366	Ficedula_albicollis
ENSAMXG00000004457	ddx43	70	76.145	ENSFHEG00000011226	ddx43	95	75.856	Fundulus_heteroclitus
ENSAMXG00000004457	ddx43	63	77.174	ENSGMOG00000004178	ddx43	99	77.174	Gadus_morhua
ENSAMXG00000004457	ddx43	58	76.000	ENSGALG00000015928	-	97	76.000	Gallus_gallus
ENSAMXG00000004457	ddx43	93	66.571	ENSGAFG00000012622	ddx43	96	66.378	Gambusia_affinis
ENSAMXG00000004457	ddx43	77	74.336	ENSGACG00000012072	ddx43	97	74.341	Gasterosteus_aculeatus
ENSAMXG00000004457	ddx43	93	57.980	ENSGAGG00000025230	-	98	57.544	Gopherus_agassizii
ENSAMXG00000004457	ddx43	93	67.055	ENSHBUG00000011653	ddx43	96	66.715	Haplochromis_burtoni
ENSAMXG00000004457	ddx43	93	62.899	ENSHCOG00000014704	ddx43	83	71.034	Hippocampus_comes
ENSAMXG00000004457	ddx43	96	75.966	ENSIPUG00000023423	ddx43	97	75.036	Ictalurus_punctatus
ENSAMXG00000004457	ddx43	93	66.428	ENSKMAG00000016167	ddx43	95	67.054	Kryptolebias_marmoratus
ENSAMXG00000004457	ddx43	93	67.765	ENSLBEG00000007913	ddx43	96	69.072	Labrus_bergylta
ENSAMXG00000004457	ddx43	75	64.389	ENSLACG00000000741	ddx43	99	68.852	Latimeria_chalumnae
ENSAMXG00000004457	ddx43	93	68.129	ENSLOCG00000016170	ddx43	85	76.125	Lepisosteus_oculatus
ENSAMXG00000004457	ddx43	92	64.877	ENSMAMG00000022128	ddx43	95	64.483	Mastacembelus_armatus
ENSAMXG00000004457	ddx43	93	67.201	ENSMZEG00005027349	ddx43	96	66.181	Maylandia_zebra
ENSAMXG00000004457	ddx43	78	67.549	ENSMGAG00000013832	-	97	67.193	Meleagris_gallopavo
ENSAMXG00000004457	ddx43	98	64.755	ENSMMOG00000007346	ddx43	89	70.128	Mola_mola
ENSAMXG00000004457	ddx43	84	58.614	ENSMODG00000018546	-	86	63.363	Monodelphis_domestica
ENSAMXG00000004457	ddx43	81	53.922	ENSMODG00000014335	-	95	56.738	Monodelphis_domestica
ENSAMXG00000004457	ddx43	93	67.382	ENSMALG00000020673	ddx43	83	74.660	Monopterus_albus
ENSAMXG00000004457	ddx43	93	67.994	ENSNBRG00000010942	ddx43	96	66.324	Neolamprologus_brichardi
ENSAMXG00000004457	ddx43	93	67.784	ENSONIG00000001195	ddx43	98	67.254	Oreochromis_niloticus
ENSAMXG00000004457	ddx43	62	67.914	ENSOANG00000006467	-	100	66.494	Ornithorhynchus_anatinus
ENSAMXG00000004457	ddx43	83	71.845	ENSORLG00000002267	ddx43	88	75.304	Oryzias_latipes
ENSAMXG00000004457	ddx43	79	74.403	ENSORLG00020018592	ddx43	89	75.304	Oryzias_latipes_hni
ENSAMXG00000004457	ddx43	84	71.567	ENSORLG00015004854	ddx43	88	75.130	Oryzias_latipes_hsok
ENSAMXG00000004457	ddx43	84	70.240	ENSOMEG00000023418	ddx43	88	74.520	Oryzias_melastigma
ENSAMXG00000004457	ddx43	93	69.265	ENSPKIG00000002941	ddx43	80	77.504	Paramormyrops_kingsleyae
ENSAMXG00000004457	ddx43	82	62.355	ENSPSIG00000002202	-	88	66.243	Pelodiscus_sinensis
ENSAMXG00000004457	ddx43	60	58.289	ENSPMGG00000019854	ddx43	91	57.368	Periophthalmus_magnuspinnatus
ENSAMXG00000004457	ddx43	50	64.667	ENSPMAG00000006112	ddx43	98	71.053	Petromyzon_marinus
ENSAMXG00000004457	ddx43	82	57.143	ENSPCIG00000002492	-	89	55.635	Phascolarctos_cinereus
ENSAMXG00000004457	ddx43	58	72.642	ENSPCIG00000017981	-	96	72.642	Phascolarctos_cinereus
ENSAMXG00000004457	ddx43	93	67.672	ENSPFOG00000004241	ddx43	96	67.199	Poecilia_formosa
ENSAMXG00000004457	ddx43	93	67.960	ENSPLAG00000023362	ddx43	96	67.489	Poecilia_latipinna
ENSAMXG00000004457	ddx43	93	67.672	ENSPMEG00000004870	ddx43	96	67.344	Poecilia_mexicana
ENSAMXG00000004457	ddx43	93	62.245	ENSPREG00000000923	ddx43	96	61.561	Poecilia_reticulata
ENSAMXG00000004457	ddx43	94	65.025	ENSPNYG00000009064	ddx43	80	71.971	Pundamilia_nyererei
ENSAMXG00000004457	ddx43	93	81.845	ENSPNAG00000001232	ddx43	93	79.595	Pygocentrus_nattereri
ENSAMXG00000004457	ddx43	81	56.641	ENSSHAG00000016933	-	97	59.612	Sarcophilus_harrisii
ENSAMXG00000004457	ddx43	81	59.216	ENSSHAG00000001847	-	88	63.009	Sarcophilus_harrisii
ENSAMXG00000004457	ddx43	82	71.148	ENSSFOG00015012193	ddx43	86	75.273	Scleropages_formosus
ENSAMXG00000004457	ddx43	93	70.487	ENSSMAG00000019288	ddx43	95	69.004	Scophthalmus_maximus
ENSAMXG00000004457	ddx43	93	69.297	ENSSDUG00000020120	ddx43	95	70.203	Seriola_dumerili
ENSAMXG00000004457	ddx43	93	67.737	ENSSLDG00000017225	ddx43	93	68.041	Seriola_lalandi_dorsalis
ENSAMXG00000004457	ddx43	65	62.791	ENSSPUG00000018097	-	97	62.791	Sphenodon_punctatus
ENSAMXG00000004457	ddx43	93	69.514	ENSSPAG00000006858	ddx43	95	69.661	Stegastes_partitus
ENSAMXG00000004457	ddx43	82	64.008	ENSTGUG00000012684	-	95	67.663	Taeniopygia_guttata
ENSAMXG00000004457	ddx43	92	61.047	ENSTRUG00000012795	ddx43	96	60.606	Takifugu_rubripes
ENSAMXG00000004457	ddx43	81	70.389	ENSTNIG00000009822	ddx43	97	72.105	Tetraodon_nigroviridis
ENSAMXG00000004457	ddx43	93	59.798	ENSXETG00000011767	ddx43	99	59.682	Xenopus_tropicalis
ENSAMXG00000004457	ddx43	93	63.755	ENSXCOG00000013810	ddx43	96	63.450	Xiphophorus_couchianus
ENSAMXG00000004457	ddx43	93	67.096	ENSXMAG00000017126	ddx43	96	66.955	Xiphophorus_maculatus