EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000004610 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 2055 bases
Position: chr13:5641387-5643441
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000004713	zf-C2H2	PF00096.26	1.3e-45	1	8
ENSAMXP00000004713	zf-C2H2	PF00096.26	1.3e-45	2	8
ENSAMXP00000004713	zf-C2H2	PF00096.26	1.3e-45	3	8
ENSAMXP00000004713	zf-C2H2	PF00096.26	1.3e-45	4	8
ENSAMXP00000004713	zf-C2H2	PF00096.26	1.3e-45	5	8
ENSAMXP00000004713	zf-C2H2	PF00096.26	1.3e-45	6	8
ENSAMXP00000004713	zf-C2H2	PF00096.26	1.3e-45	7	8
ENSAMXP00000004713	zf-C2H2	PF00096.26	1.3e-45	8	8
ENSAMXP00000004713	zf-met	PF12874.7	7.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000004713	-	714	-	ENSAMXP00000004713	237 (aa)	-	W5KAV2

Gene Model

Click here to download ENSAMXG00000004610's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000004610's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000004610	-	99	38.865	ENSAMXG00000025761	-	85	38.865
ENSAMXG00000004610	-	96	70.044	ENSAMXG00000031496	-	87	70.044
ENSAMXG00000004610	-	98	62.996	ENSAMXG00000039770	-	83	62.996
ENSAMXG00000004610	-	96	54.795	ENSAMXG00000038122	-	84	54.795
ENSAMXG00000004610	-	100	73.568	ENSAMXG00000043423	-	76	73.568
ENSAMXG00000004610	-	96	74.346	ENSAMXG00000035683	-	91	74.346
ENSAMXG00000004610	-	95	40.541	ENSAMXG00000006669	GFI1	57	40.541
ENSAMXG00000004610	-	96	51.648	ENSAMXG00000034934	-	79	51.648
ENSAMXG00000004610	-	96	37.500	ENSAMXG00000038235	snai2	52	38.532
ENSAMXG00000004610	-	96	62.871	ENSAMXG00000029161	-	78	62.871
ENSAMXG00000004610	-	96	64.758	ENSAMXG00000017959	-	94	65.044
ENSAMXG00000004610	-	96	50.704	ENSAMXG00000037382	-	75	37.500
ENSAMXG00000004610	-	96	61.066	ENSAMXG00000036241	-	84	69.186
ENSAMXG00000004610	-	96	75.243	ENSAMXG00000040212	-	82	75.243
ENSAMXG00000004610	-	96	73.786	ENSAMXG00000031794	-	94	73.786
ENSAMXG00000004610	-	96	74.779	ENSAMXG00000031009	-	93	74.779
ENSAMXG00000004610	-	99	70.638	ENSAMXG00000001626	-	99	70.940
ENSAMXG00000004610	-	100	59.912	ENSAMXG00000042174	-	92	59.912
ENSAMXG00000004610	-	100	50.769	ENSAMXG00000033252	-	95	50.769
ENSAMXG00000004610	-	99	40.000	ENSAMXG00000024907	znf319b	84	40.000
ENSAMXG00000004610	-	95	53.211	ENSAMXG00000013492	-	96	48.148
ENSAMXG00000004610	-	96	76.211	ENSAMXG00000039744	-	99	76.211
ENSAMXG00000004610	-	96	76.056	ENSAMXG00000031646	-	94	76.056
ENSAMXG00000004610	-	96	75.000	ENSAMXG00000037703	-	81	74.641
ENSAMXG00000004610	-	96	66.029	ENSAMXG00000039752	-	92	66.029
ENSAMXG00000004610	-	97	71.212	ENSAMXG00000009563	-	93	71.212
ENSAMXG00000004610	-	96	72.683	ENSAMXG00000031489	-	91	72.683
ENSAMXG00000004610	-	95	76.119	ENSAMXG00000039162	-	94	76.119
ENSAMXG00000004610	-	96	74.779	ENSAMXG00000036567	-	77	74.779
ENSAMXG00000004610	-	96	76.549	ENSAMXG00000025452	-	94	76.549
ENSAMXG00000004610	-	95	75.829	ENSAMXG00000025455	-	99	75.829
ENSAMXG00000004610	-	96	72.845	ENSAMXG00000039977	-	89	72.845
ENSAMXG00000004610	-	96	70.354	ENSAMXG00000039016	-	87	70.354
ENSAMXG00000004610	-	97	59.735	ENSAMXG00000032237	-	93	59.735
ENSAMXG00000004610	-	95	36.364	ENSAMXG00000038085	scrt1a	51	36.364
ENSAMXG00000004610	-	96	51.579	ENSAMXG00000034333	-	84	51.579
ENSAMXG00000004610	-	98	60.748	ENSAMXG00000036257	-	88	60.748
ENSAMXG00000004610	-	99	47.945	ENSAMXG00000007973	-	97	47.945
ENSAMXG00000004610	-	96	76.991	ENSAMXG00000024978	-	96	76.991
ENSAMXG00000004610	-	99	47.115	ENSAMXG00000014745	-	82	48.947
ENSAMXG00000004610	-	97	70.354	ENSAMXG00000038453	-	82	70.354
ENSAMXG00000004610	-	96	70.485	ENSAMXG00000042275	-	92	70.485
ENSAMXG00000004610	-	96	65.778	ENSAMXG00000042593	-	90	65.778
ENSAMXG00000004610	-	96	68.473	ENSAMXG00000037760	-	95	68.473
ENSAMXG00000004610	-	99	54.082	ENSAMXG00000043178	-	79	58.273
ENSAMXG00000004610	-	98	49.778	ENSAMXG00000035127	-	92	49.778
ENSAMXG00000004610	-	96	71.333	ENSAMXG00000010078	-	84	71.333
ENSAMXG00000004610	-	99	77.778	ENSAMXG00000030530	-	99	77.778
ENSAMXG00000004610	-	99	76.271	ENSAMXG00000003002	-	90	76.271
ENSAMXG00000004610	-	97	64.179	ENSAMXG00000043302	-	72	64.179
ENSAMXG00000004610	-	96	74.890	ENSAMXG00000037885	-	96	74.890
ENSAMXG00000004610	-	99	44.138	ENSAMXG00000035246	-	67	44.138
ENSAMXG00000004610	-	95	64.563	ENSAMXG00000037717	-	94	64.563
ENSAMXG00000004610	-	96	63.000	ENSAMXG00000037709	-	81	63.000
ENSAMXG00000004610	-	96	65.700	ENSAMXG00000032841	-	79	65.700
ENSAMXG00000004610	-	99	67.133	ENSAMXG00000030742	-	99	67.133
ENSAMXG00000004610	-	97	62.882	ENSAMXG00000043978	-	88	62.882
ENSAMXG00000004610	-	96	73.786	ENSAMXG00000039432	-	93	73.786
ENSAMXG00000004610	-	96	72.081	ENSAMXG00000039182	-	81	72.081
ENSAMXG00000004610	-	96	69.841	ENSAMXG00000039004	-	88	69.841
ENSAMXG00000004610	-	96	76.712	ENSAMXG00000035809	-	99	76.712
ENSAMXG00000004610	-	99	63.830	ENSAMXG00000044107	-	88	63.830
ENSAMXG00000004610	-	98	63.090	ENSAMXG00000039700	-	91	63.090
ENSAMXG00000004610	-	99	65.652	ENSAMXG00000029960	-	94	65.652
ENSAMXG00000004610	-	96	77.093	ENSAMXG00000043251	-	94	77.093
ENSAMXG00000004610	-	95	61.458	ENSAMXG00000031307	-	58	61.458
ENSAMXG00000004610	-	95	75.943	ENSAMXG00000008613	-	96	75.943
ENSAMXG00000004610	-	99	60.680	ENSAMXG00000043019	-	93	62.147
ENSAMXG00000004610	-	96	76.106	ENSAMXG00000007092	-	98	76.106
ENSAMXG00000004610	-	98	58.190	ENSAMXG00000034344	-	79	62.609
ENSAMXG00000004610	-	93	40.854	ENSAMXG00000042191	zbtb47a	69	40.854
ENSAMXG00000004610	-	97	65.502	ENSAMXG00000037981	-	71	65.502
ENSAMXG00000004610	-	96	76.699	ENSAMXG00000041975	-	80	76.699
ENSAMXG00000004610	-	98	59.406	ENSAMXG00000038905	-	87	59.406
ENSAMXG00000004610	-	96	70.312	ENSAMXG00000041609	-	92	72.105
ENSAMXG00000004610	-	98	61.504	ENSAMXG00000013274	-	90	62.963
ENSAMXG00000004610	-	99	67.841	ENSAMXG00000032619	-	97	67.841
ENSAMXG00000004610	-	96	75.758	ENSAMXG00000029878	-	92	74.843
ENSAMXG00000004610	-	96	71.359	ENSAMXG00000009776	-	96	71.359
ENSAMXG00000004610	-	97	35.616	ENSAMXG00000039849	snai1b	55	36.893
ENSAMXG00000004610	-	93	42.105	ENSAMXG00000034873	-	80	41.791
ENSAMXG00000004610	-	99	48.444	ENSAMXG00000012589	-	85	48.444
ENSAMXG00000004610	-	99	41.611	ENSAMXG00000041864	prdm5	83	40.164
ENSAMXG00000004610	-	96	72.687	ENSAMXG00000041865	-	97	72.687
ENSAMXG00000004610	-	100	69.432	ENSAMXG00000041861	-	87	69.432
ENSAMXG00000004610	-	98	47.761	ENSAMXG00000041862	-	95	47.761
ENSAMXG00000004610	-	96	75.785	ENSAMXG00000033500	-	92	75.785
ENSAMXG00000004610	-	96	63.717	ENSAMXG00000034402	-	91	63.717
ENSAMXG00000004610	-	99	74.009	ENSAMXG00000041128	-	91	74.009
ENSAMXG00000004610	-	98	65.487	ENSAMXG00000033201	-	94	65.487
ENSAMXG00000004610	-	96	77.093	ENSAMXG00000025965	-	94	77.093
ENSAMXG00000004610	-	95	52.817	ENSAMXG00000035286	si:ch1073-224n8.1	86	41.743
ENSAMXG00000004610	-	98	68.584	ENSAMXG00000037923	-	99	68.584
ENSAMXG00000004610	-	97	71.861	ENSAMXG00000029828	-	98	71.861
ENSAMXG00000004610	-	99	67.757	ENSAMXG00000040806	-	86	67.757
ENSAMXG00000004610	-	96	77.515	ENSAMXG00000030911	-	65	77.515
ENSAMXG00000004610	-	98	61.135	ENSAMXG00000042746	-	88	61.135
ENSAMXG00000004610	-	96	77.477	ENSAMXG00000017609	-	74	77.477
ENSAMXG00000004610	-	99	42.000	ENSAMXG00000016921	znf341	53	42.000
ENSAMXG00000004610	-	95	75.556	ENSAMXG00000038636	-	98	75.221
ENSAMXG00000004610	-	98	42.857	ENSAMXG00000044096	-	82	42.857
ENSAMXG00000004610	-	95	46.774	ENSAMXG00000033001	-	50	46.774
ENSAMXG00000004610	-	97	66.346	ENSAMXG00000035875	-	99	66.346
ENSAMXG00000004610	-	97	65.502	ENSAMXG00000044110	-	88	65.502
ENSAMXG00000004610	-	97	60.078	ENSAMXG00000036633	-	63	62.100
ENSAMXG00000004610	-	98	60.825	ENSAMXG00000019489	-	85	60.825
ENSAMXG00000004610	-	96	76.923	ENSAMXG00000009558	-	93	76.923
ENSAMXG00000004610	-	95	70.370	ENSAMXG00000042774	-	90	70.370
ENSAMXG00000004610	-	96	38.983	ENSAMXG00000039622	zbtb41	51	38.298
ENSAMXG00000004610	-	97	67.391	ENSAMXG00000040677	-	87	67.391
ENSAMXG00000004610	-	100	62.996	ENSAMXG00000010805	-	94	62.996
ENSAMXG00000004610	-	96	69.626	ENSAMXG00000035145	-	65	69.626
ENSAMXG00000004610	-	96	38.000	ENSAMXG00000002273	patz1	51	36.095
ENSAMXG00000004610	-	96	67.257	ENSAMXG00000035437	-	97	67.257
ENSAMXG00000004610	-	97	65.000	ENSAMXG00000029109	-	87	65.801
ENSAMXG00000004610	-	95	74.537	ENSAMXG00000031900	-	91	74.537
ENSAMXG00000004610	-	96	39.234	ENSAMXG00000044034	-	57	39.234
ENSAMXG00000004610	-	96	57.522	ENSAMXG00000030659	-	75	57.522
ENSAMXG00000004610	-	95	76.106	ENSAMXG00000041404	-	96	75.771
ENSAMXG00000004610	-	98	35.294	ENSAMXG00000016620	-	50	35.294
ENSAMXG00000004610	-	96	76.214	ENSAMXG00000036762	-	96	76.214
ENSAMXG00000004610	-	95	71.239	ENSAMXG00000034847	-	84	71.239
ENSAMXG00000004610	-	95	61.979	ENSAMXG00000043541	-	80	62.174
ENSAMXG00000004610	-	98	32.850	ENSAMXG00000035525	znf646	66	32.287
ENSAMXG00000004610	-	96	39.303	ENSAMXG00000029059	-	61	39.303
ENSAMXG00000004610	-	96	74.779	ENSAMXG00000018161	-	95	74.779
ENSAMXG00000004610	-	99	67.257	ENSAMXG00000031844	-	92	67.257
ENSAMXG00000004610	-	97	75.771	ENSAMXG00000011804	-	86	75.771
ENSAMXG00000004610	-	100	58.650	ENSAMXG00000042784	-	94	57.895
ENSAMXG00000004610	-	98	64.286	ENSAMXG00000037143	-	97	63.877
ENSAMXG00000004610	-	99	60.829	ENSAMXG00000012873	-	87	59.633
ENSAMXG00000004610	-	97	59.259	ENSAMXG00000034096	-	74	59.259
ENSAMXG00000004610	-	96	77.778	ENSAMXG00000035690	-	72	75.221
ENSAMXG00000004610	-	99	63.556	ENSAMXG00000036915	-	94	63.556
ENSAMXG00000004610	-	98	66.520	ENSAMXG00000026142	-	91	66.520
ENSAMXG00000004610	-	99	58.120	ENSAMXG00000026143	-	95	58.120
ENSAMXG00000004610	-	99	60.199	ENSAMXG00000026144	-	92	59.829
ENSAMXG00000004610	-	95	73.516	ENSAMXG00000036233	-	81	73.516
ENSAMXG00000004610	-	98	42.731	ENSAMXG00000033299	-	69	43.827
ENSAMXG00000004610	-	96	77.434	ENSAMXG00000031501	-	88	77.434
ENSAMXG00000004610	-	95	66.667	ENSAMXG00000033124	-	55	65.882
ENSAMXG00000004610	-	96	76.549	ENSAMXG00000029178	-	98	76.549
ENSAMXG00000004610	-	96	68.605	ENSAMXG00000030963	-	64	68.605
ENSAMXG00000004610	-	98	64.807	ENSAMXG00000042633	-	97	64.807
ENSAMXG00000004610	-	98	62.602	ENSAMXG00000038536	-	88	62.602
ENSAMXG00000004610	-	100	68.041	ENSAMXG00000029518	-	58	76.404
ENSAMXG00000004610	-	99	66.667	ENSAMXG00000032212	-	86	66.667
ENSAMXG00000004610	-	97	66.029	ENSAMXG00000044028	-	95	71.311
ENSAMXG00000004610	-	97	60.000	ENSAMXG00000012604	-	96	67.978
ENSAMXG00000004610	-	98	58.369	ENSAMXG00000029783	-	86	58.407
ENSAMXG00000004610	-	98	70.677	ENSAMXG00000033013	-	82	70.677
ENSAMXG00000004610	-	95	71.564	ENSAMXG00000040630	-	97	69.820
ENSAMXG00000004610	-	97	64.912	ENSAMXG00000042167	-	84	64.912
ENSAMXG00000004610	-	95	42.697	ENSAMXG00000015228	-	64	42.697
ENSAMXG00000004610	-	99	67.797	ENSAMXG00000037326	-	94	67.797
ENSAMXG00000004610	-	97	68.722	ENSAMXG00000036849	-	89	68.722
ENSAMXG00000004610	-	96	75.771	ENSAMXG00000034958	-	91	75.771
ENSAMXG00000004610	-	97	65.882	ENSAMXG00000041650	-	86	65.882
ENSAMXG00000004610	-	99	67.727	ENSAMXG00000042938	-	88	70.222
ENSAMXG00000004610	-	96	73.009	ENSAMXG00000000353	-	93	73.009
ENSAMXG00000004610	-	96	74.537	ENSAMXG00000035920	-	89	75.130
ENSAMXG00000004610	-	98	54.545	ENSAMXG00000034857	-	64	54.545
ENSAMXG00000004610	-	96	74.661	ENSAMXG00000032457	-	91	74.661
ENSAMXG00000004610	-	96	77.093	ENSAMXG00000039879	-	97	77.093
ENSAMXG00000004610	-	96	66.079	ENSAMXG00000039408	-	88	66.079
ENSAMXG00000004610	-	97	41.250	ENSAMXG00000007441	-	58	41.250
ENSAMXG00000004610	-	96	69.907	ENSAMXG00000010930	-	81	69.907
ENSAMXG00000004610	-	98	72.414	ENSAMXG00000035949	-	75	72.414
ENSAMXG00000004610	-	95	67.130	ENSAMXG00000043291	-	62	67.130
ENSAMXG00000004610	-	99	67.308	ENSAMXG00000041721	-	68	70.769
ENSAMXG00000004610	-	96	71.239	ENSAMXG00000041725	-	91	71.239
ENSAMXG00000004610	-	99	55.859	ENSAMXG00000038325	-	92	58.590
ENSAMXG00000004610	-	96	69.333	ENSAMXG00000038324	-	81	69.333
ENSAMXG00000004610	-	96	58.850	ENSAMXG00000038284	-	95	58.850
ENSAMXG00000004610	-	98	63.542	ENSAMXG00000038280	-	85	63.542

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000004610	-	98	56.637	ENSAPLG00000012660	-	81	56.637	Anas_platyrhynchos
ENSAMXG00000004610	-	99	56.897	ENSEASG00005020341	-	95	56.897	Equus_asinus_asinus
ENSAMXG00000004610	-	99	56.897	ENSECAG00000017293	-	95	56.897	Equus_caballus
ENSAMXG00000004610	-	99	54.626	ENSECAG00000039445	-	96	54.626	Equus_caballus
ENSAMXG00000004610	-	96	62.733	ENSGAGG00000004740	-	80	60.889	Gopherus_agassizii
ENSAMXG00000004610	-	96	60.000	ENSGAGG00000011574	-	77	60.000	Gopherus_agassizii
ENSAMXG00000004610	-	97	57.965	ENSGAGG00000019349	-	78	58.407	Gopherus_agassizii
ENSAMXG00000004610	-	99	61.504	ENSGAGG00000008773	-	81	61.504	Gopherus_agassizii
ENSAMXG00000004610	-	96	61.290	ENSGAGG00000009739	-	99	61.290	Gopherus_agassizii
ENSAMXG00000004610	-	96	57.604	ENSGAGG00000006960	-	83	56.637	Gopherus_agassizii
ENSAMXG00000004610	-	96	60.000	ENSGAGG00000006683	-	89	59.903	Gopherus_agassizii
ENSAMXG00000004610	-	96	58.065	ENSGAGG00000015451	-	82	58.065	Gopherus_agassizii
ENSAMXG00000004610	-	98	59.292	ENSGAGG00000017986	-	90	58.744	Gopherus_agassizii
ENSAMXG00000004610	-	96	56.195	ENSGAGG00000000971	-	92	57.209	Gopherus_agassizii
ENSAMXG00000004610	-	96	67.805	ENSIPUG00000015177	-	53	67.805	Ictalurus_punctatus
ENSAMXG00000004610	-	96	72.170	ENSIPUG00000015400	-	98	72.632	Ictalurus_punctatus
ENSAMXG00000004610	-	96	54.751	ENSMPUG00000008437	-	76	54.751	Mustela_putorius_furo
ENSAMXG00000004610	-	96	58.667	ENSPTIG00000009259	-	96	58.667	Panthera_tigris_altaica
ENSAMXG00000004610	-	98	55.340	ENSPSIG00000016247	-	52	54.622	Pelodiscus_sinensis
ENSAMXG00000004610	-	98	62.555	ENSPNAG00000021942	-	91	63.285	Pygocentrus_nattereri
ENSAMXG00000004610	-	97	68.584	ENSPNAG00000005914	-	73	68.584	Pygocentrus_nattereri
ENSAMXG00000004610	-	95	72.566	ENSPNAG00000018437	-	78	72.566	Pygocentrus_nattereri
ENSAMXG00000004610	-	96	62.719	ENSPNAG00000012366	-	87	62.719	Pygocentrus_nattereri
ENSAMXG00000004610	-	96	66.854	ENSPNAG00000017455	-	75	66.854	Pygocentrus_nattereri
ENSAMXG00000004610	-	96	71.292	ENSPNAG00000007072	-	87	71.292	Pygocentrus_nattereri
ENSAMXG00000004610	-	99	67.521	ENSPNAG00000003919	-	94	67.521	Pygocentrus_nattereri
ENSAMXG00000004610	-	98	63.913	ENSPNAG00000000783	-	86	63.913	Pygocentrus_nattereri
ENSAMXG00000004610	-	99	69.231	ENSPNAG00000003526	-	83	69.231	Pygocentrus_nattereri
ENSAMXG00000004610	-	96	70.588	ENSPNAG00000018471	-	79	70.588	Pygocentrus_nattereri
ENSAMXG00000004610	-	96	68.599	ENSPNAG00000016025	-	89	68.599	Pygocentrus_nattereri
ENSAMXG00000004610	-	99	53.797	ENSPNAG00000029386	-	90	55.882	Pygocentrus_nattereri
ENSAMXG00000004610	-	97	66.964	ENSPNAG00000028765	-	86	66.964	Pygocentrus_nattereri
ENSAMXG00000004610	-	97	65.487	ENSPNAG00000017479	-	82	65.487	Pygocentrus_nattereri
ENSAMXG00000004610	-	97	63.953	ENSPNAG00000008653	-	97	68.670	Pygocentrus_nattereri
ENSAMXG00000004610	-	96	66.169	ENSPNAG00000024704	-	90	66.169	Pygocentrus_nattereri
ENSAMXG00000004610	-	99	66.525	ENSPNAG00000012138	-	87	66.525	Pygocentrus_nattereri
ENSAMXG00000004610	-	96	71.515	ENSPNAG00000002287	-	84	71.515	Pygocentrus_nattereri
ENSAMXG00000004610	-	96	69.027	ENSPNAG00000016045	-	67	69.027	Pygocentrus_nattereri
ENSAMXG00000004610	-	95	52.604	ENSUAMG00000027415	-	80	52.604	Ursus_americanus
ENSAMXG00000004610	-	98	54.630	ENSUAMG00000027384	-	87	53.456	Ursus_americanus
ENSAMXG00000004610	-	96	55.947	ENSVPAG00000002698	-	99	55.947	Vicugna_pacos