EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000004780 (Gene tree)
Gene ID: -
Gene Symbol: ercc6l
Alias: si:ch211-278b8.3
Full Name: ERCC excision repair 6 like%2C spindle assembly checkpoint helicase
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 7794 bases
Position: chr3:38093604-38101397
Accession: 103044103
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000004890	ResIII	PF04851.15	5.9e-12	1	1
ENSAMXP00000004890	DEAD	PF00270.29	1.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000004890	-	3573	XM_022667141	ENSAMXP00000004890	1190 (aa)	XP_022522862	W5KBC9

Gene Model

Click here to download ENSAMXG00000004780's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000004780's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000004780	ercc6l	79	64.334	ENSG00000186871	ERCC6L	73	65.884	Homo_sapiens
ENSAMXG00000004780	ercc6l	56	70.437	ENSAPOG00000011392	ercc6l	97	70.287	Acanthochromis_polyacanthus
ENSAMXG00000004780	ercc6l	83	64.334	ENSAMEG00000005804	ERCC6L	73	64.334	Ailuropoda_melanoleuca
ENSAMXG00000004780	ercc6l	84	67.578	ENSAOCG00000016285	-	84	67.448	Amphiprion_ocellaris
ENSAMXG00000004780	ercc6l	64	68.653	ENSAOCG00000016323	ercc6l	62	68.701	Amphiprion_ocellaris
ENSAMXG00000004780	ercc6l	84	68.653	ENSAPEG00000022533	ERCC6L	92	70.149	Amphiprion_percula
ENSAMXG00000004780	ercc6l	84	67.624	ENSAPEG00000022499	ercc6l	85	67.358	Amphiprion_percula
ENSAMXG00000004780	ercc6l	86	69.330	ENSATEG00000012969	ercc6l	85	69.221	Anabas_testudineus
ENSAMXG00000004780	ercc6l	56	64.818	ENSACAG00000028866	-	89	67.957	Anolis_carolinensis
ENSAMXG00000004780	ercc6l	56	64.912	ENSACAG00000029354	-	92	68.062	Anolis_carolinensis
ENSAMXG00000004780	ercc6l	90	50.259	ENSACAG00000001226	-	68	62.657	Anolis_carolinensis
ENSAMXG00000004780	ercc6l	87	63.745	ENSANAG00000022378	ERCC6L	70	62.371	Aotus_nancymaae
ENSAMXG00000004780	ercc6l	84	69.503	ENSACLG00000006555	ercc6l	79	69.582	Astatotilapia_calliptera
ENSAMXG00000004780	ercc6l	80	66.575	ENSBTAG00000005607	ERCC6L	74	66.575	Bos_taurus
ENSAMXG00000004780	ercc6l	80	65.465	ENSCJAG00000022332	ERCC6L	65	65.326	Callithrix_jacchus
ENSAMXG00000004780	ercc6l	81	65.742	ENSCAFG00000023690	ERCC6L	71	65.742	Canis_familiaris
ENSAMXG00000004780	ercc6l	72	67.423	ENSCAFG00020021313	ERCC6L	72	67.423	Canis_lupus_dingo
ENSAMXG00000004780	ercc6l	83	62.516	ENSCHIG00000009967	ERCC6L	78	62.516	Capra_hircus
ENSAMXG00000004780	ercc6l	78	65.326	ENSTSYG00000013701	ERCC6L	73	65.326	Carlito_syrichta
ENSAMXG00000004780	ercc6l	77	65.439	ENSCPOG00000011407	ERCC6L	71	65.156	Cavia_porcellus
ENSAMXG00000004780	ercc6l	77	66.019	ENSCCAG00000023790	ERCC6L	65	66.019	Cebus_capucinus
ENSAMXG00000004780	ercc6l	79	63.795	ENSCATG00000038031	ERCC6L	74	63.795	Cercocebus_atys
ENSAMXG00000004780	ercc6l	81	61.449	ENSCLAG00000017785	-	76	62.401	Chinchilla_lanigera
ENSAMXG00000004780	ercc6l	75	65.465	ENSCLAG00000015218	-	65	65.326	Chinchilla_lanigera
ENSAMXG00000004780	ercc6l	79	63.503	ENSCSAG00000011173	ERCC6L	74	63.369	Chlorocebus_sabaeus
ENSAMXG00000004780	ercc6l	87	64.912	ENSCPBG00000011965	ERCC6L	82	71.705	Chrysemys_picta_bellii
ENSAMXG00000004780	ercc6l	79	63.526	ENSCANG00000016909	ERCC6L	74	63.526	Colobus_angolensis_palliatus
ENSAMXG00000004780	ercc6l	80	66.255	ENSCGRG00001016668	Ercc6l	72	66.390	Cricetulus_griseus_chok1gshd
ENSAMXG00000004780	ercc6l	80	66.255	ENSCGRG00000006223	Ercc6l	72	66.390	Cricetulus_griseus_crigri
ENSAMXG00000004780	ercc6l	81	71.130	ENSCSEG00000010268	ercc6l	77	71.269	Cynoglossus_semilaevis
ENSAMXG00000004780	ercc6l	58	67.249	ENSCVAG00000008090	ercc6l	96	66.812	Cyprinodon_variegatus
ENSAMXG00000004780	ercc6l	86	74.937	ENSDARG00000002479	ercc6l	74	75.439	Danio_rerio
ENSAMXG00000004780	ercc6l	81	65.698	ENSDNOG00000032356	ERCC6L	73	65.698	Dasypus_novemcinctus
ENSAMXG00000004780	ercc6l	75	63.685	ENSDORG00000007865	Ercc6l	68	63.685	Dipodomys_ordii
ENSAMXG00000004780	ercc6l	64	68.354	ENSETEG00000018007	ERCC6L	51	68.354	Echinops_telfairi
ENSAMXG00000004780	ercc6l	72	67.585	ENSEASG00005007025	ERCC6L	72	67.585	Equus_asinus_asinus
ENSAMXG00000004780	ercc6l	81	66.019	ENSECAG00000002513	ERCC6L	73	66.019	Equus_caballus
ENSAMXG00000004780	ercc6l	71	66.044	ENSEEUG00000015724	ERCC6L	67	66.044	Erinaceus_europaeus
ENSAMXG00000004780	ercc6l	85	73.418	ENSELUG00000007917	ercc6l	79	73.418	Esox_lucius
ENSAMXG00000004780	ercc6l	83	63.257	ENSFCAG00000012038	ERCC6L	75	63.257	Felis_catus
ENSAMXG00000004780	ercc6l	71	66.140	ENSFALG00000011797	ERCC6L	70	66.140	Ficedula_albicollis
ENSAMXG00000004780	ercc6l	79	66.145	ENSFDAG00000019713	ERCC6L	72	66.145	Fukomys_damarensis
ENSAMXG00000004780	ercc6l	99	51.968	ENSFHEG00000007205	ercc6l	97	53.084	Fundulus_heteroclitus
ENSAMXG00000004780	ercc6l	55	66.871	ENSFHEG00000007269	-	94	66.871	Fundulus_heteroclitus
ENSAMXG00000004780	ercc6l	64	63.731	ENSGALG00000003881	ERCC6L	60	63.731	Gallus_gallus
ENSAMXG00000004780	ercc6l	52	71.222	ENSGAGG00000018784	ERCC6L	60	65.755	Gopherus_agassizii
ENSAMXG00000004780	ercc6l	79	64.199	ENSGGOG00000022367	ERCC6L	67	64.199	Gorilla_gorilla
ENSAMXG00000004780	ercc6l	85	69.131	ENSHBUG00000007810	ercc6l	82	69.211	Haplochromis_burtoni
ENSAMXG00000004780	ercc6l	77	65.278	ENSHGLG00000016594	ERCC6L	72	65.278	Heterocephalus_glaber_female
ENSAMXG00000004780	ercc6l	77	65.278	ENSHGLG00100003339	ERCC6L	72	65.278	Heterocephalus_glaber_male
ENSAMXG00000004780	ercc6l	63	66.447	ENSHCOG00000001051	ercc6l	61	66.447	Hippocampus_comes
ENSAMXG00000004780	ercc6l	99	57.368	ENSIPUG00000016117	ercc6l	98	57.289	Ictalurus_punctatus
ENSAMXG00000004780	ercc6l	73	65.374	ENSJJAG00000022875	Ercc6l	74	65.374	Jaculus_jaculus
ENSAMXG00000004780	ercc6l	84	67.708	ENSKMAG00000011587	ercc6l	78	67.839	Kryptolebias_marmoratus
ENSAMXG00000004780	ercc6l	78	69.634	ENSLBEG00000000091	ercc6l	84	69.634	Labrus_bergylta
ENSAMXG00000004780	ercc6l	86	65.985	ENSLACG00000002634	ERCC6L	77	65.985	Latimeria_chalumnae
ENSAMXG00000004780	ercc6l	84	70.556	ENSLOCG00000013925	ercc6l	80	70.421	Lepisosteus_oculatus
ENSAMXG00000004780	ercc6l	81	64.951	ENSLAFG00000014985	ERCC6L	74	64.951	Loxodonta_africana
ENSAMXG00000004780	ercc6l	79	63.795	ENSMFAG00000045509	ERCC6L	74	63.795	Macaca_fascicularis
ENSAMXG00000004780	ercc6l	79	63.795	ENSMMUG00000012957	ERCC6L	73	65.571	Macaca_mulatta
ENSAMXG00000004780	ercc6l	79	63.795	ENSMNEG00000030867	ERCC6L	74	63.795	Macaca_nemestrina
ENSAMXG00000004780	ercc6l	79	63.795	ENSMLEG00000000190	ERCC6L	74	63.795	Mandrillus_leucophaeus
ENSAMXG00000004780	ercc6l	84	67.014	ENSMAMG00000018595	ercc6l	77	66.884	Mastacembelus_armatus
ENSAMXG00000004780	ercc6l	84	69.503	ENSMZEG00005001556	ercc6l	80	69.582	Maylandia_zebra
ENSAMXG00000004780	ercc6l	85	63.218	ENSMGAG00000002094	ERCC6L	80	63.218	Meleagris_gallopavo
ENSAMXG00000004780	ercc6l	80	66.207	ENSMAUG00000015560	Ercc6l	73	66.207	Mesocricetus_auratus
ENSAMXG00000004780	ercc6l	80	65.726	ENSMICG00000035415	ERCC6L	72	65.726	Microcebus_murinus
ENSAMXG00000004780	ercc6l	68	60.907	ENSMOCG00000021344	Ercc6l	63	60.784	Microtus_ochrogaster
ENSAMXG00000004780	ercc6l	81	60.870	ENSMODG00000010916	ERCC6L	64	60.738	Monodelphis_domestica
ENSAMXG00000004780	ercc6l	62	69.118	ENSMALG00000003561	-	56	69.076	Monopterus_albus
ENSAMXG00000004780	ercc6l	83	69.210	ENSMALG00000003609	ercc6l	78	69.478	Monopterus_albus
ENSAMXG00000004780	ercc6l	85	59.951	MGP_CAROLIEiJ_G0033297	Ercc6l	79	59.951	Mus_caroli
ENSAMXG00000004780	ercc6l	85	60.024	ENSMUSG00000051220	Ercc6l	78	59.903	Mus_musculus
ENSAMXG00000004780	ercc6l	79	64.745	MGP_PahariEiJ_G0031835	Ercc6l	75	64.745	Mus_pahari
ENSAMXG00000004780	ercc6l	89	65.738	ENSMPUG00000005291	ERCC6L	83	65.738	Mustela_putorius_furo
ENSAMXG00000004780	ercc6l	81	65.837	ENSMLUG00000011670	ERCC6L	74	65.698	Myotis_lucifugus
ENSAMXG00000004780	ercc6l	73	66.714	ENSNGAG00000021063	Ercc6l	72	66.714	Nannospalax_galili
ENSAMXG00000004780	ercc6l	79	63.661	ENSNLEG00000036284	ERCC6L	74	63.661	Nomascus_leucogenys
ENSAMXG00000004780	ercc6l	81	63.738	ENSODEG00000002328	ERCC6L	59	63.738	Octodon_degus
ENSAMXG00000004780	ercc6l	85	69.320	ENSONIG00000000589	ercc6l	82	69.576	Oreochromis_niloticus
ENSAMXG00000004780	ercc6l	71	65.925	ENSOANG00000014708	ERCC6L	67	65.925	Ornithorhynchus_anatinus
ENSAMXG00000004780	ercc6l	81	62.141	ENSOCUG00000008724	ERCC6L	69	62.141	Oryctolagus_cuniculus
ENSAMXG00000004780	ercc6l	53	73.214	ENSORLG00000024240	ercc6l	97	73.512	Oryzias_latipes
ENSAMXG00000004780	ercc6l	84	68.519	ENSORLG00020014999	ercc6l	68	68.463	Oryzias_latipes_hni
ENSAMXG00000004780	ercc6l	76	68.211	ENSOMEG00000009481	ercc6l	70	68.082	Oryzias_melastigma
ENSAMXG00000004780	ercc6l	77	65.647	ENSOGAG00000031470	-	72	65.508	Otolemur_garnettii
ENSAMXG00000004780	ercc6l	77	66.064	ENSOGAG00000034301	-	73	65.925	Otolemur_garnettii
ENSAMXG00000004780	ercc6l	86	62.169	ENSOARG00000005908	ERCC6L	80	62.295	Ovis_aries
ENSAMXG00000004780	ercc6l	79	64.334	ENSPPAG00000031861	ERCC6L	74	64.334	Pan_paniscus
ENSAMXG00000004780	ercc6l	83	63.257	ENSPPRG00000012408	ERCC6L	77	62.988	Panthera_pardus
ENSAMXG00000004780	ercc6l	79	64.334	ENSPTRG00000022023	ERCC6L	74	64.334	Pan_troglodytes
ENSAMXG00000004780	ercc6l	79	63.795	ENSPANG00000011598	ERCC6L	74	63.795	Papio_anubis
ENSAMXG00000004780	ercc6l	84	71.923	ENSPKIG00000022325	ercc6l	77	72.144	Paramormyrops_kingsleyae
ENSAMXG00000004780	ercc6l	99	52.188	ENSPSIG00000004789	ERCC6L	99	52.350	Pelodiscus_sinensis
ENSAMXG00000004780	ercc6l	68	68.715	ENSPMGG00000023343	ercc6l	76	68.715	Periophthalmus_magnuspinnatus
ENSAMXG00000004780	ercc6l	89	59.732	ENSPEMG00000007920	Ercc6l	76	61.977	Peromyscus_maniculatus_bairdii
ENSAMXG00000004780	ercc6l	62	59.866	ENSPMAG00000005064	ercc6l	99	60.552	Petromyzon_marinus
ENSAMXG00000004780	ercc6l	72	58.962	ENSPCIG00000026973	ERCC6L	68	58.962	Phascolarctos_cinereus
ENSAMXG00000004780	ercc6l	99	51.962	ENSPFOG00000010410	ercc6l	97	52.913	Poecilia_formosa
ENSAMXG00000004780	ercc6l	79	71.182	ENSPLAG00000005575	ercc6l	93	65.239	Poecilia_latipinna
ENSAMXG00000004780	ercc6l	99	52.042	ENSPMEG00000016911	ercc6l	97	53.252	Poecilia_mexicana
ENSAMXG00000004780	ercc6l	84	66.490	ENSPREG00000017617	ercc6l	88	66.755	Poecilia_reticulata
ENSAMXG00000004780	ercc6l	79	64.199	ENSPPYG00000020461	ERCC6L	74	64.199	Pongo_abelii
ENSAMXG00000004780	ercc6l	86	62.324	ENSPCOG00000024286	ERCC6L	76	62.324	Propithecus_coquereli
ENSAMXG00000004780	ercc6l	80	63.904	ENSPVAG00000013596	ERCC6L	76	63.904	Pteropus_vampyrus
ENSAMXG00000004780	ercc6l	84	69.412	ENSPNYG00000013185	ercc6l	88	70.185	Pundamilia_nyererei
ENSAMXG00000004780	ercc6l	81	83.875	ENSPNAG00000006556	ercc6l	87	83.875	Pygocentrus_nattereri
ENSAMXG00000004780	ercc6l	89	59.806	ENSRNOG00000003208	Ercc6l	79	59.806	Rattus_norvegicus
ENSAMXG00000004780	ercc6l	78	63.836	ENSRBIG00000036588	ERCC6L	76	63.836	Rhinopithecus_bieti
ENSAMXG00000004780	ercc6l	79	63.661	ENSRROG00000042561	ERCC6L	74	63.661	Rhinopithecus_roxellana
ENSAMXG00000004780	ercc6l	79	64.161	ENSSBOG00000029416	ERCC6L	67	64.161	Saimiri_boliviensis_boliviensis
ENSAMXG00000004780	ercc6l	68	59.360	ENSSHAG00000001331	-	69	61.772	Sarcophilus_harrisii
ENSAMXG00000004780	ercc6l	80	58.364	ENSSHAG00000012578	-	81	58.364	Sarcophilus_harrisii
ENSAMXG00000004780	ercc6l	83	73.012	ENSSFOG00015009709	ercc6l	72	73.012	Scleropages_formosus
ENSAMXG00000004780	ercc6l	80	68.523	ENSSDUG00000013307	ercc6l	83	71.172	Seriola_dumerili
ENSAMXG00000004780	ercc6l	81	69.303	ENSSLDG00000014910	ercc6l	86	69.303	Seriola_lalandi_dorsalis
ENSAMXG00000004780	ercc6l	60	67.729	ENSSPUG00000005866	ERCC6L	65	67.729	Sphenodon_punctatus
ENSAMXG00000004780	ercc6l	70	67.995	ENSSPAG00000018472	ercc6l	86	68.608	Stegastes_partitus
ENSAMXG00000004780	ercc6l	78	66.713	ENSSSCG00000021834	ERCC6L	73	66.943	Sus_scrofa
ENSAMXG00000004780	ercc6l	66	66.460	ENSTRUG00000012053	ercc6l	66	66.337	Takifugu_rubripes
ENSAMXG00000004780	ercc6l	80	64.439	ENSTTRG00000010777	ERCC6L	75	64.439	Tursiops_truncatus
ENSAMXG00000004780	ercc6l	74	66.041	ENSUAMG00000015605	ERCC6L	57	66.041	Ursus_americanus
ENSAMXG00000004780	ercc6l	54	66.041	ENSUMAG00000004863	ERCC6L	57	66.041	Ursus_maritimus
ENSAMXG00000004780	ercc6l	83	65.328	ENSVPAG00000010950	ERCC6L	74	65.328	Vicugna_pacos
ENSAMXG00000004780	ercc6l	81	65.187	ENSVVUG00000025512	ERCC6L	71	65.187	Vulpes_vulpes
ENSAMXG00000004780	ercc6l	83	66.223	ENSXETG00000022574	ercc6l	78	66.223	Xenopus_tropicalis
ENSAMXG00000004780	ercc6l	53	71.226	ENSXCOG00000011494	ercc6l	96	67.737	Xiphophorus_couchianus
ENSAMXG00000004780	ercc6l	80	70.471	ENSXMAG00000000948	ercc6l	87	70.756	Xiphophorus_maculatus