EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000004882 (Gene tree)
Gene ID: 103046955
Gene Symbol: rab12
Alias: zgc:111945
Full Name: RAB12%2C member RAS oncogene family
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 9774 bases
Position: chr17:12999957-13009730
Accession: 103046955
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000005001	MMR_HSR1	PF01926.23	9.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000005001	-	741	XM_022678983	ENSAMXP00000005001	246 (aa)	XP_022534704	W5KBP0

Gene Model

Click here to download ENSAMXG00000004882's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000004882's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000004882	rab12	83	38.208	ENSAMXG00000042655	rab11bb	75	43.636
ENSAMXG00000004882	rab12	74	38.919	ENSAMXG00000035919	rab5ab	86	38.220
ENSAMXG00000004882	rab12	83	36.232	ENSAMXG00000040879	rab25a	84	39.130
ENSAMXG00000004882	rab12	61	30.464	ENSAMXG00000035885	hrasa	86	31.737
ENSAMXG00000004882	rab12	83	37.073	ENSAMXG00000039737	RAB19	79	40.462
ENSAMXG00000004882	rab12	66	49.390	ENSAMXG00000042073	rab18b	79	49.390
ENSAMXG00000004882	rab12	63	31.847	ENSAMXG00000010919	mras	80	33.333
ENSAMXG00000004882	rab12	67	39.053	ENSAMXG00000031957	zgc:100918	82	39.053
ENSAMXG00000004882	rab12	81	33.333	ENSAMXG00000026476	rab9b	75	35.714
ENSAMXG00000004882	rab12	80	40.404	ENSAMXG00000040126	-	64	42.857
ENSAMXG00000004882	rab12	70	50.581	ENSAMXG00000003547	rab1ba	77	50.581
ENSAMXG00000004882	rab12	61	30.464	ENSAMXG00000033907	hrasb	86	31.737
ENSAMXG00000004882	rab12	59	36.667	ENSAMXG00000006018	rab34b	62	37.267
ENSAMXG00000004882	rab12	72	50.282	ENSAMXG00000039486	zgc:171927	81	51.163
ENSAMXG00000004882	rab12	61	33.775	ENSAMXG00000017217	kras	86	34.731
ENSAMXG00000004882	rab12	83	38.889	ENSAMXG00000037623	-	75	44.848
ENSAMXG00000004882	rab12	65	39.623	ENSAMXG00000013054	rab22a	80	39.623
ENSAMXG00000004882	rab12	61	31.126	ENSAMXG00000012327	nras	90	32.335
ENSAMXG00000004882	rab12	70	50.000	ENSAMXG00000030712	rab13	85	50.000
ENSAMXG00000004882	rab12	67	38.462	ENSAMXG00000002254	-	81	38.462
ENSAMXG00000004882	rab12	63	36.943	ENSAMXG00000033390	rap1aa	79	36.943
ENSAMXG00000004882	rab12	67	45.509	ENSAMXG00000003717	rab39bb	78	45.509
ENSAMXG00000004882	rab12	68	44.643	ENSAMXG00000036772	rab2a	79	44.643
ENSAMXG00000004882	rab12	66	48.765	ENSAMXG00000039865	rab35b	94	43.979
ENSAMXG00000004882	rab12	63	30.769	ENSAMXG00000029130	-	82	30.769
ENSAMXG00000004882	rab12	73	39.011	ENSAMXG00000033216	rab41	92	39.011
ENSAMXG00000004882	rab12	67	43.713	ENSAMXG00000041657	rab39ba	78	43.713
ENSAMXG00000004882	rab12	80	39.423	ENSAMXG00000003155	rab11a	76	43.636
ENSAMXG00000004882	rab12	69	41.714	ENSAMXG00000040460	zgc:101559	70	42.197
ENSAMXG00000004882	rab12	78	30.653	ENSAMXG00000034227	rab32b	82	32.759
ENSAMXG00000004882	rab12	62	43.791	ENSAMXG00000024632	rab11al	74	43.791
ENSAMXG00000004882	rab12	64	36.250	ENSAMXG00000043003	rab34a	62	36.250
ENSAMXG00000004882	rab12	76	37.129	ENSAMXG00000040286	rab33ba	80	38.144
ENSAMXG00000004882	rab12	65	33.540	ENSAMXG00000010334	rras	84	33.333
ENSAMXG00000004882	rab12	77	48.148	ENSAMXG00000034850	-	83	52.071
ENSAMXG00000004882	rab12	81	36.000	ENSAMXG00000032547	rab6a	75	39.744
ENSAMXG00000004882	rab12	84	39.614	ENSAMXG00000040604	-	80	47.531
ENSAMXG00000004882	rab12	86	45.327	ENSAMXG00000042419	rab3c	78	52.353
ENSAMXG00000004882	rab12	64	36.585	ENSAMXG00000032663	si:dkey-13a21.4	75	36.585
ENSAMXG00000004882	rab12	77	41.146	ENSAMXG00000033470	RAB15	88	43.085
ENSAMXG00000004882	rab12	77	43.158	ENSAMXG00000043951	rab15	80	45.294
ENSAMXG00000004882	rab12	70	40.698	ENSAMXG00000037267	-	79	40.698
ENSAMXG00000004882	rab12	70	38.889	ENSAMXG00000036330	RAB38	83	38.889
ENSAMXG00000004882	rab12	80	39.899	ENSAMXG00000009640	rab14	81	42.286
ENSAMXG00000004882	rab12	67	36.905	ENSAMXG00000025889	RAB9A	83	36.905
ENSAMXG00000004882	rab12	70	40.116	ENSAMXG00000043717	rab5c	76	40.116
ENSAMXG00000004882	rab12	67	35.714	ENSAMXG00000026059	RAB9A	83	35.714
ENSAMXG00000004882	rab12	71	37.363	ENSAMXG00000004630	rab6ba	91	37.363
ENSAMXG00000004882	rab12	65	30.769	ENSAMXG00000033427	rasl10a	84	30.769
ENSAMXG00000004882	rab12	76	31.551	ENSAMXG00000014960	rab23	73	35.294
ENSAMXG00000004882	rab12	83	37.931	ENSAMXG00000029712	rab25b	95	37.931
ENSAMXG00000004882	rab12	82	37.313	ENSAMXG00000036179	rab5aa	81	39.106
ENSAMXG00000004882	rab12	68	37.500	ENSAMXG00000040611	rabl2	74	37.500
ENSAMXG00000004882	rab12	76	38.421	ENSAMXG00000032027	rab7a	81	37.870
ENSAMXG00000004882	rab12	82	38.835	ENSAMXG00000032729	rab42a	87	40.323
ENSAMXG00000004882	rab12	67	50.000	ENSAMXG00000009935	rab30	67	50.000
ENSAMXG00000004882	rab12	65	41.916	ENSAMXG00000037428	-	78	41.916
ENSAMXG00000004882	rab12	83	46.305	ENSAMXG00000032564	rab1ab	83	52.071
ENSAMXG00000004882	rab12	52	34.615	ENSAMXG00000003504	rab20	52	34.586
ENSAMXG00000004882	rab12	63	32.484	ENSAMXG00000033764	si:ch73-116o1.2	80	33.918
ENSAMXG00000004882	rab12	69	38.764	ENSAMXG00000017266	rab36	67	38.764
ENSAMXG00000004882	rab12	75	43.478	ENSAMXG00000038243	si:dkey-16l2.16	89	46.429

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000004882	rab12	83	86.829	ENSG00000206418	RAB12	92	86.161	Homo_sapiens
ENSAMXG00000004882	rab12	88	76.712	ENSAMEG00000007452	RAB12	94	80.365	Ailuropoda_melanoleuca
ENSAMXG00000004882	rab12	100	89.837	ENSACIG00000020616	rab12	100	88.618	Amphilophus_citrinellus
ENSAMXG00000004882	rab12	100	89.837	ENSAOCG00000002130	rab12	100	89.024	Amphiprion_ocellaris
ENSAMXG00000004882	rab12	100	89.837	ENSAPEG00000013255	rab12	100	89.024	Amphiprion_percula
ENSAMXG00000004882	rab12	100	89.431	ENSATEG00000019683	rab12	100	88.618	Anabas_testudineus
ENSAMXG00000004882	rab12	81	86.500	ENSACAG00000003360	RAB12	87	85.268	Anolis_carolinensis
ENSAMXG00000004882	rab12	100	90.650	ENSACLG00000007696	rab12	100	89.837	Astatotilapia_calliptera
ENSAMXG00000004882	rab12	83	86.829	ENSBTAG00000010356	RAB12	92	86.161	Bos_taurus
ENSAMXG00000004882	rab12	83	86.829	ENSCJAG00000015468	RAB12	72	82.329	Callithrix_jacchus
ENSAMXG00000004882	rab12	83	87.317	ENSCAFG00020023721	RAB12	84	81.928	Canis_lupus_dingo
ENSAMXG00000004882	rab12	83	86.829	ENSCHIG00000016103	RAB12	92	86.161	Capra_hircus
ENSAMXG00000004882	rab12	85	84.286	ENSCPOG00000022689	RAB12	100	88.571	Cavia_porcellus
ENSAMXG00000004882	rab12	83	86.829	ENSCCAG00000022862	RAB12	91	86.161	Cebus_capucinus
ENSAMXG00000004882	rab12	83	86.829	ENSCATG00000037784	RAB12	93	86.161	Cercocebus_atys
ENSAMXG00000004882	rab12	83	86.829	ENSCSAG00000017569	RAB12	72	82.329	Chlorocebus_sabaeus
ENSAMXG00000004882	rab12	91	83.482	ENSCPBG00000028375	RAB12	91	86.607	Chrysemys_picta_bellii
ENSAMXG00000004882	rab12	88	82.648	ENSCANG00000031453	RAB12	99	86.301	Colobus_angolensis_palliatus
ENSAMXG00000004882	rab12	93	80.000	ENSCGRG00001006958	Rab12	76	85.714	Cricetulus_griseus_chok1gshd
ENSAMXG00000004882	rab12	100	89.024	ENSCSEG00000016933	rab12	100	88.211	Cynoglossus_semilaevis
ENSAMXG00000004882	rab12	100	89.431	ENSCVAG00000003539	rab12	100	89.431	Cyprinodon_variegatus
ENSAMXG00000004882	rab12	100	88.211	ENSDARG00000089428	rab12	100	88.211	Danio_rerio
ENSAMXG00000004882	rab12	83	87.317	ENSDNOG00000046064	RAB12	51	86.607	Dasypus_novemcinctus
ENSAMXG00000004882	rab12	91	82.379	ENSDORG00000008920	Rab12	99	86.161	Dipodomys_ordii
ENSAMXG00000004882	rab12	77	67.196	ENSEBUG00000006581	rab12	91	67.196	Eptatretus_burgeri
ENSAMXG00000004882	rab12	83	87.317	ENSEASG00005002926	RAB12	83	82.329	Equus_asinus_asinus
ENSAMXG00000004882	rab12	83	87.317	ENSECAG00000007384	RAB12	71	82.329	Equus_caballus
ENSAMXG00000004882	rab12	100	89.431	ENSELUG00000007123	rab12	100	88.211	Esox_lucius
ENSAMXG00000004882	rab12	83	87.317	ENSFCAG00000027710	RAB12	72	81.928	Felis_catus
ENSAMXG00000004882	rab12	100	90.244	ENSFHEG00000004319	rab12	100	89.431	Fundulus_heteroclitus
ENSAMXG00000004882	rab12	86	88.208	ENSGMOG00000012335	rab12	87	88.208	Gadus_morhua
ENSAMXG00000004882	rab12	90	86.099	ENSGALG00000033608	RAB12	97	85.537	Gallus_gallus
ENSAMXG00000004882	rab12	90	86.878	ENSGACG00000016639	rab12	100	85.520	Gasterosteus_aculeatus
ENSAMXG00000004882	rab12	91	83.482	ENSGAGG00000007278	RAB12	91	86.607	Gopherus_agassizii
ENSAMXG00000004882	rab12	100	90.650	ENSHBUG00000008497	rab12	100	89.837	Haplochromis_burtoni
ENSAMXG00000004882	rab12	95	77.966	ENSHGLG00000006189	RAB12	86	85.973	Heterocephalus_glaber_female
ENSAMXG00000004882	rab12	100	86.179	ENSHCOG00000012376	rab12	100	85.366	Hippocampus_comes
ENSAMXG00000004882	rab12	100	90.244	ENSIPUG00000017401	rab12	100	89.024	Ictalurus_punctatus
ENSAMXG00000004882	rab12	88	83.562	ENSSTOG00000025122	RAB12	96	87.215	Ictidomys_tridecemlineatus
ENSAMXG00000004882	rab12	91	81.938	ENSJJAG00000019064	Rab12	98	86.161	Jaculus_jaculus
ENSAMXG00000004882	rab12	100	87.398	ENSKMAG00000020056	rab12	100	86.992	Kryptolebias_marmoratus
ENSAMXG00000004882	rab12	100	88.211	ENSLBEG00000013756	rab12	100	87.398	Labrus_bergylta
ENSAMXG00000004882	rab12	100	82.329	ENSLACG00000010461	RAB12	100	82.329	Latimeria_chalumnae
ENSAMXG00000004882	rab12	93	85.217	ENSLOCG00000002680	rab12	100	84.739	Lepisosteus_oculatus
ENSAMXG00000004882	rab12	83	86.829	ENSMFAG00000043551	RAB12	91	86.161	Macaca_fascicularis
ENSAMXG00000004882	rab12	83	86.829	ENSMNEG00000040853	RAB12	89	86.161	Macaca_nemestrina
ENSAMXG00000004882	rab12	100	89.431	ENSMAMG00000006862	rab12	100	88.618	Mastacembelus_armatus
ENSAMXG00000004882	rab12	100	90.650	ENSMZEG00005024316	rab12	100	89.837	Maylandia_zebra
ENSAMXG00000004882	rab12	82	83.824	ENSMGAG00000009197	RAB12	100	87.745	Meleagris_gallopavo
ENSAMXG00000004882	rab12	93	80.000	ENSMAUG00000008371	Rab12	76	85.714	Mesocricetus_auratus
ENSAMXG00000004882	rab12	90	82.589	ENSMICG00000030661	RAB12	94	86.161	Microcebus_murinus
ENSAMXG00000004882	rab12	88	82.192	ENSMOCG00000000452	Rab12	100	85.845	Microtus_ochrogaster
ENSAMXG00000004882	rab12	93	83.043	ENSMODG00000021452	RAB12	66	87.054	Monodelphis_domestica
ENSAMXG00000004882	rab12	100	87.805	ENSMALG00000015762	rab12	100	86.992	Monopterus_albus
ENSAMXG00000004882	rab12	93	80.870	MGP_CAROLIEiJ_G0021839	Rab12	77	86.607	Mus_caroli
ENSAMXG00000004882	rab12	93	80.870	ENSMUSG00000023460	Rab12	92	86.607	Mus_musculus
ENSAMXG00000004882	rab12	93	80.870	MGP_PahariEiJ_G0020826	Rab12	92	86.607	Mus_pahari
ENSAMXG00000004882	rab12	93	80.870	MGP_SPRETEiJ_G0022750	Rab12	77	86.607	Mus_spretus
ENSAMXG00000004882	rab12	93	82.609	ENSMLUG00000002883	RAB12	92	86.607	Myotis_lucifugus
ENSAMXG00000004882	rab12	90	75.893	ENSNGAG00000019722	-	91	75.893	Nannospalax_galili
ENSAMXG00000004882	rab12	86	85.514	ENSNGAG00000024103	-	96	85.714	Nannospalax_galili
ENSAMXG00000004882	rab12	100	90.650	ENSNBRG00000014428	rab12	100	89.837	Neolamprologus_brichardi
ENSAMXG00000004882	rab12	93	82.174	ENSNLEG00000006939	RAB12	92	86.161	Nomascus_leucogenys
ENSAMXG00000004882	rab12	100	79.920	ENSMEUG00000000493	RAB12	91	87.054	Notamacropus_eugenii
ENSAMXG00000004882	rab12	88	83.105	ENSODEG00000006414	RAB12	100	86.758	Octodon_degus
ENSAMXG00000004882	rab12	100	90.244	ENSONIG00000018469	rab12	100	89.431	Oreochromis_niloticus
ENSAMXG00000004882	rab12	100	89.837	ENSORLG00000003902	rab12	100	89.024	Oryzias_latipes
ENSAMXG00000004882	rab12	100	89.431	ENSORLG00020005131	rab12	100	88.618	Oryzias_latipes_hni
ENSAMXG00000004882	rab12	100	89.431	ENSORLG00015007869	rab12	100	88.618	Oryzias_latipes_hsok
ENSAMXG00000004882	rab12	100	89.837	ENSOMEG00000008191	rab12	100	89.024	Oryzias_melastigma
ENSAMXG00000004882	rab12	85	83.810	ENSOGAG00000028002	RAB12	99	87.619	Otolemur_garnettii
ENSAMXG00000004882	rab12	78	86.911	ENSOARG00000000728	RAB12	88	85.116	Ovis_aries
ENSAMXG00000004882	rab12	83	83.092	ENSPPAG00000009152	RAB12	97	87.379	Pan_paniscus
ENSAMXG00000004882	rab12	83	87.317	ENSPPRG00000024521	RAB12	92	86.607	Panthera_pardus
ENSAMXG00000004882	rab12	83	86.829	ENSPTRG00000009853	RAB12	92	86.161	Pan_troglodytes
ENSAMXG00000004882	rab12	83	86.341	ENSPANG00000009320	RAB12	91	85.714	Papio_anubis
ENSAMXG00000004882	rab12	100	85.425	ENSPKIG00000008579	rab12	100	84.615	Paramormyrops_kingsleyae
ENSAMXG00000004882	rab12	100	86.585	ENSPMGG00000001890	rab12	100	85.772	Periophthalmus_magnuspinnatus
ENSAMXG00000004882	rab12	93	80.435	ENSPEMG00000021032	Rab12	77	86.161	Peromyscus_maniculatus_bairdii
ENSAMXG00000004882	rab12	93	83.478	ENSPCIG00000010453	RAB12	61	81.526	Phascolarctos_cinereus
ENSAMXG00000004882	rab12	100	87.805	ENSPFOG00000001579	rab12	100	87.398	Poecilia_formosa
ENSAMXG00000004882	rab12	100	87.805	ENSPLAG00000013594	rab12	100	87.398	Poecilia_latipinna
ENSAMXG00000004882	rab12	100	87.805	ENSPMEG00000010417	rab12	100	87.398	Poecilia_mexicana
ENSAMXG00000004882	rab12	100	88.211	ENSPREG00000017487	rab12	100	87.398	Poecilia_reticulata
ENSAMXG00000004882	rab12	83	86.829	ENSPPYG00000009015	-	72	81.526	Pongo_abelii
ENSAMXG00000004882	rab12	83	87.317	ENSPCAG00000015007	RAB12	92	86.607	Procavia_capensis
ENSAMXG00000004882	rab12	83	86.829	ENSPCOG00000019816	RAB12	92	86.161	Propithecus_coquereli
ENSAMXG00000004882	rab12	83	86.829	ENSPVAG00000002757	RAB12	92	86.161	Pteropus_vampyrus
ENSAMXG00000004882	rab12	100	90.650	ENSPNYG00000005654	rab12	100	89.837	Pundamilia_nyererei
ENSAMXG00000004882	rab12	100	90.650	ENSPNYG00000023905	rab12	100	89.837	Pundamilia_nyererei
ENSAMXG00000004882	rab12	100	97.154	ENSPNAG00000015031	rab12	100	97.154	Pygocentrus_nattereri
ENSAMXG00000004882	rab12	93	78.355	ENSRNOG00000019295	Rab12	84	84.466	Rattus_norvegicus
ENSAMXG00000004882	rab12	83	86.829	ENSRBIG00000028760	RAB12	96	86.161	Rhinopithecus_bieti
ENSAMXG00000004882	rab12	91	81.938	ENSRROG00000019249	RAB12	94	86.161	Rhinopithecus_roxellana
ENSAMXG00000004882	rab12	89	79.372	ENSSBOG00000021125	RAB12	85	82.589	Saimiri_boliviensis_boliviensis
ENSAMXG00000004882	rab12	93	82.969	ENSSHAG00000001489	RAB12	90	87.255	Sarcophilus_harrisii
ENSAMXG00000004882	rab12	100	88.618	ENSSMAG00000012678	rab12	100	87.805	Scophthalmus_maximus
ENSAMXG00000004882	rab12	100	89.431	ENSSDUG00000008505	rab12	100	88.618	Seriola_dumerili
ENSAMXG00000004882	rab12	100	89.431	ENSSLDG00000022239	rab12	100	88.618	Seriola_lalandi_dorsalis
ENSAMXG00000004882	rab12	83	87.745	ENSSPUG00000003222	RAB12	91	87.054	Sphenodon_punctatus
ENSAMXG00000004882	rab12	100	89.431	ENSSPAG00000010822	rab12	100	88.618	Stegastes_partitus
ENSAMXG00000004882	rab12	83	86.829	ENSSSCG00000038026	RAB12	92	86.607	Sus_scrofa
ENSAMXG00000004882	rab12	90	85.650	ENSTGUG00000009889	RAB12	97	85.124	Taeniopygia_guttata
ENSAMXG00000004882	rab12	100	87.398	ENSTRUG00000024455	rab12	100	86.179	Takifugu_rubripes
ENSAMXG00000004882	rab12	100	87.805	ENSTNIG00000014859	rab12	100	86.585	Tetraodon_nigroviridis
ENSAMXG00000004882	rab12	81	85.500	ENSTTRG00000008711	RAB12	99	84.932	Tursiops_truncatus
ENSAMXG00000004882	rab12	83	87.317	ENSUAMG00000018092	RAB12	92	86.607	Ursus_americanus
ENSAMXG00000004882	rab12	83	86.341	ENSVVUG00000011748	RAB12	99	86.425	Vulpes_vulpes
ENSAMXG00000004882	rab12	93	82.684	ENSXETG00000004289	rab12	79	83.600	Xenopus_tropicalis
ENSAMXG00000004882	rab12	100	86.992	ENSXCOG00000019310	rab12	100	86.179	Xiphophorus_couchianus
ENSAMXG00000004882	rab12	100	87.398	ENSXMAG00000023617	rab12	100	86.585	Xiphophorus_maculatus