EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000005164 (Gene tree)
Gene ID: 103026667
Gene Symbol: rrp8
Alias: fk33d07|si:ch211-149e23.3|si:ch211-152b13.1|wu:fk33d07
Full Name: ribosomal RNA processing 8
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 16326 bases
Position: chr1:4134092-4150417
Accession: 103026667
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000005291	Methyltransf_8	PF05148.15	2.9e-88	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000005291	-	3158	XM_007237706	ENSAMXP00000005291	515 (aa)	XP_007237768	W5KCI0

Gene Model

Click here to download ENSAMXG00000005164's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000005164's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000005164	rrp8	52	54.909	ENSG00000132275	RRP8	76	62.037	Homo_sapiens
ENSAMXG00000005164	rrp8	94	48.119	ENSACIG00000019896	rrp8	99	46.498	Amphilophus_citrinellus
ENSAMXG00000005164	rrp8	100	45.375	ENSAOCG00000008785	rrp8	100	45.486	Amphiprion_ocellaris
ENSAMXG00000005164	rrp8	100	45.201	ENSAPEG00000008416	rrp8	100	45.061	Amphiprion_percula
ENSAMXG00000005164	rrp8	87	46.654	ENSATEG00000014110	rrp8	92	46.943	Anabas_testudineus
ENSAMXG00000005164	rrp8	94	47.985	ENSACLG00000002746	rrp8	100	47.321	Astatotilapia_calliptera
ENSAMXG00000005164	rrp8	52	53.506	ENSBTAG00000000697	RRP8	59	53.506	Bos_taurus
ENSAMXG00000005164	rrp8	52	54.044	ENSCHIG00000019002	RRP8	56	54.044	Capra_hircus
ENSAMXG00000005164	rrp8	65	56.917	ENSTSYG00000003391	RRP8	76	61.111	Carlito_syrichta
ENSAMXG00000005164	rrp8	63	45.872	ENSCAPG00000013284	RRP8	80	45.872	Cavia_aperea
ENSAMXG00000005164	rrp8	71	45.430	ENSCPOG00000012515	RRP8	77	45.430	Cavia_porcellus
ENSAMXG00000005164	rrp8	57	37.049	ENSCING00000003281	-	88	36.721	Ciona_intestinalis
ENSAMXG00000005164	rrp8	73	42.298	ENSCSAVG00000006435	-	89	42.298	Ciona_savignyi
ENSAMXG00000005164	rrp8	71	51.122	ENSCSEG00000007330	rrp8	100	51.122	Cynoglossus_semilaevis
ENSAMXG00000005164	rrp8	100	49.077	ENSDARG00000071652	rrp8	100	49.174	Danio_rerio
ENSAMXG00000005164	rrp8	87	42.821	ENSETEG00000008877	RRP8	78	42.821	Echinops_telfairi
ENSAMXG00000005164	rrp8	68	43.220	ENSECAG00000006612	RRP8	69	42.298	Equus_caballus
ENSAMXG00000005164	rrp8	86	42.008	ENSGAFG00000012331	rrp8	99	42.062	Gambusia_affinis
ENSAMXG00000005164	rrp8	74	55.065	ENSGACG00000011343	rrp8	95	55.065	Gasterosteus_aculeatus
ENSAMXG00000005164	rrp8	52	54.545	ENSGGOG00000000389	RRP8	76	62.037	Gorilla_gorilla
ENSAMXG00000005164	rrp8	98	47.253	ENSHBUG00000017131	rrp8	100	47.679	Haplochromis_burtoni
ENSAMXG00000005164	rrp8	100	47.736	ENSHCOG00000001293	rrp8	100	47.736	Hippocampus_comes
ENSAMXG00000005164	rrp8	100	51.306	ENSIPUG00000017733	rrp8	100	51.119	Ictalurus_punctatus
ENSAMXG00000005164	rrp8	56	52.041	ENSJJAG00000020608	-	81	42.686	Jaculus_jaculus
ENSAMXG00000005164	rrp8	100	44.504	ENSKMAG00000009229	rrp8	100	45.951	Kryptolebias_marmoratus
ENSAMXG00000005164	rrp8	57	61.017	ENSLBEG00000019937	rrp8	100	50.498	Labrus_bergylta
ENSAMXG00000005164	rrp8	73	45.876	ENSLACG00000001252	-	100	46.392	Latimeria_chalumnae
ENSAMXG00000005164	rrp8	100	44.771	ENSLOCG00000009591	rrp8	100	44.404	Lepisosteus_oculatus
ENSAMXG00000005164	rrp8	94	47.793	ENSMZEG00005008926	rrp8	100	47.143	Maylandia_zebra
ENSAMXG00000005164	rrp8	53	53.214	ENSMOCG00000002486	Rrp8	61	53.214	Microtus_ochrogaster
ENSAMXG00000005164	rrp8	94	45.857	ENSMMOG00000015709	rrp8	99	46.435	Mola_mola
ENSAMXG00000005164	rrp8	100	45.890	ENSMALG00000015984	rrp8	100	45.719	Monopterus_albus
ENSAMXG00000005164	rrp8	53	52.613	MGP_PahariEiJ_G0013451	Rrp8	62	52.613	Mus_pahari
ENSAMXG00000005164	rrp8	53	52.613	MGP_SPRETEiJ_G0031348	Rrp8	62	52.613	Mus_spretus
ENSAMXG00000005164	rrp8	57	51.316	ENSNGAG00000012450	Rrp8	65	51.316	Nannospalax_galili
ENSAMXG00000005164	rrp8	75	50.721	ENSNBRG00000023416	rrp8	98	50.962	Neolamprologus_brichardi
ENSAMXG00000005164	rrp8	69	53.650	ENSNLEG00000017445	RRP8	61	53.650	Nomascus_leucogenys
ENSAMXG00000005164	rrp8	50	55.769	ENSODEG00000011209	RRP8	88	42.143	Octodon_degus
ENSAMXG00000005164	rrp8	73	42.029	ENSONIG00000016861	rrp8	96	42.512	Oreochromis_niloticus
ENSAMXG00000005164	rrp8	100	45.026	ENSORLG00000004175	rrp8	99	45.375	Oryzias_latipes
ENSAMXG00000005164	rrp8	100	44.503	ENSORLG00020011413	rrp8	99	46.073	Oryzias_latipes_hni
ENSAMXG00000005164	rrp8	100	45.043	ENSORLG00015015410	rrp8	99	45.739	Oryzias_latipes_hsok
ENSAMXG00000005164	rrp8	53	63.273	ENSOMEG00000003161	rrp8	100	45.760	Oryzias_melastigma
ENSAMXG00000005164	rrp8	52	54.545	ENSPPAG00000040792	RRP8	76	62.037	Pan_paniscus
ENSAMXG00000005164	rrp8	52	54.545	ENSPTRG00000003297	RRP8	76	62.037	Pan_troglodytes
ENSAMXG00000005164	rrp8	100	44.154	ENSPKIG00000024217	rrp8	100	44.154	Paramormyrops_kingsleyae
ENSAMXG00000005164	rrp8	58	50.163	ENSPEMG00000017257	Rrp8	66	50.163	Peromyscus_maniculatus_bairdii
ENSAMXG00000005164	rrp8	100	44.643	ENSPLAG00000011349	rrp8	100	45.504	Poecilia_latipinna
ENSAMXG00000005164	rrp8	100	43.238	ENSPMEG00000009888	rrp8	100	45.648	Poecilia_mexicana
ENSAMXG00000005164	rrp8	86	42.886	ENSPREG00000008450	rrp8	99	43.089	Poecilia_reticulata
ENSAMXG00000005164	rrp8	52	54.545	ENSPPYG00000003538	RRP8	59	54.545	Pongo_abelii
ENSAMXG00000005164	rrp8	94	48.356	ENSPNYG00000002878	rrp8	100	47.662	Pundamilia_nyererei
ENSAMXG00000005164	rrp8	100	53.125	ENSPNAG00000024779	rrp8	100	53.945	Pygocentrus_nattereri
ENSAMXG00000005164	rrp8	100	44.367	ENSSFOG00015003917	rrp8	99	44.367	Scleropages_formosus
ENSAMXG00000005164	rrp8	100	46.167	ENSSMAG00000004859	rrp8	100	46.410	Scophthalmus_maximus
ENSAMXG00000005164	rrp8	94	45.818	ENSSDUG00000010477	rrp8	94	45.652	Seriola_dumerili
ENSAMXG00000005164	rrp8	94	47.378	ENSSLDG00000000521	rrp8	94	47.201	Seriola_lalandi_dorsalis
ENSAMXG00000005164	rrp8	58	50.993	ENSSARG00000007949	RRP8	86	41.876	Sorex_araneus
ENSAMXG00000005164	rrp8	53	65.091	ENSSPAG00000006664	rrp8	78	73.333	Stegastes_partitus
ENSAMXG00000005164	rrp8	81	41.706	ENSSSCG00000023880	RRP8	79	42.553	Sus_scrofa
ENSAMXG00000005164	rrp8	100	45.781	ENSTRUG00000021812	rrp8	100	45.841	Takifugu_rubripes
ENSAMXG00000005164	rrp8	52	53.309	ENSTTRG00000004867	RRP8	59	53.309	Tursiops_truncatus
ENSAMXG00000005164	rrp8	71	50.127	ENSXCOG00000006156	rrp8	100	50.127	Xiphophorus_couchianus
ENSAMXG00000005164	rrp8	100	43.806	ENSXMAG00000005011	rrp8	100	44.524	Xiphophorus_maculatus