EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000005282 (Gene tree)
Gene ID: 103028805
Gene Symbol: trmu
Alias: zgc:110555
Full Name: tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 8301 bases
Position: chr7:11970563-11978863
Accession: 103028805
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000005423	tRNA_Me_trans	PF03054.16	5e-136	1	1
ENSAMXP00000052980	tRNA_Me_trans	PF03054.16	2.6e-116	1	2
ENSAMXP00000052980	tRNA_Me_trans	PF03054.16	2.6e-116	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000005423	-	1978	XM_007234938	ENSAMXP00000005423	413 (aa)	XP_007235000	W5KCW2
ENSAMXT00000049892	-	1164	-	ENSAMXP00000052980	387 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000005282's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000005282's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000005282	trmu	99	70.146	ENSG00000100416	TRMU	100	82.143	Homo_sapiens
ENSAMXG00000005282	trmu	99	79.562	ENSAPOG00000014458	trmu	99	79.562	Acanthochromis_polyacanthus
ENSAMXG00000005282	trmu	99	69.853	ENSAMEG00000003319	TRMU	97	69.853	Ailuropoda_melanoleuca
ENSAMXG00000005282	trmu	96	78.734	ENSACIG00000002101	trmu	95	78.734	Amphilophus_citrinellus
ENSAMXG00000005282	trmu	99	79.075	ENSAOCG00000013155	trmu	99	79.075	Amphiprion_ocellaris
ENSAMXG00000005282	trmu	99	78.832	ENSAPEG00000013350	trmu	99	78.832	Amphiprion_percula
ENSAMXG00000005282	trmu	99	79.412	ENSATEG00000007814	trmu	99	79.412	Anabas_testudineus
ENSAMXG00000005282	trmu	89	72.011	ENSAPLG00000016380	TRMU	94	72.011	Anas_platyrhynchos
ENSAMXG00000005282	trmu	96	72.152	ENSACAG00000007720	TRMU	95	72.152	Anolis_carolinensis
ENSAMXG00000005282	trmu	100	69.492	ENSANAG00000038053	TRMU	98	69.492	Aotus_nancymaae
ENSAMXG00000005282	trmu	99	79.218	ENSACLG00000005395	trmu	98	80.759	Astatotilapia_calliptera
ENSAMXG00000005282	trmu	99	69.343	ENSBTAG00000005595	TRMU	99	69.343	Bos_taurus
ENSAMXG00000005282	trmu	92	41.026	WBGene00007114	mttu-1	98	41.026	Caenorhabditis_elegans
ENSAMXG00000005282	trmu	99	68.447	ENSCJAG00000000198	TRMU	98	68.447	Callithrix_jacchus
ENSAMXG00000005282	trmu	100	69.492	ENSCAFG00000000779	TRMU	97	69.492	Canis_familiaris
ENSAMXG00000005282	trmu	100	69.492	ENSCAFG00020009184	TRMU	97	69.492	Canis_lupus_dingo
ENSAMXG00000005282	trmu	99	69.100	ENSCHIG00000017074	TRMU	99	69.100	Capra_hircus
ENSAMXG00000005282	trmu	96	72.911	ENSTSYG00000003853	TRMU	94	72.911	Carlito_syrichta
ENSAMXG00000005282	trmu	92	66.165	ENSCAPG00000013034	TRMU	94	66.165	Cavia_aperea
ENSAMXG00000005282	trmu	99	69.118	ENSCPOG00000020780	TRMU	96	69.118	Cavia_porcellus
ENSAMXG00000005282	trmu	99	68.204	ENSCCAG00000021641	TRMU	98	68.204	Cebus_capucinus
ENSAMXG00000005282	trmu	99	69.417	ENSCATG00000032800	TRMU	98	69.417	Cercocebus_atys
ENSAMXG00000005282	trmu	99	70.588	ENSCLAG00000017269	TRMU	97	70.588	Chinchilla_lanigera
ENSAMXG00000005282	trmu	99	69.660	ENSCSAG00000005279	TRMU	98	69.660	Chlorocebus_sabaeus
ENSAMXG00000005282	trmu	89	72.011	ENSCPBG00000011621	TRMU	92	72.011	Chrysemys_picta_bellii
ENSAMXG00000005282	trmu	97	47.250	ENSCING00000019371	-	97	47.250	Ciona_intestinalis
ENSAMXG00000005282	trmu	99	69.175	ENSCANG00000041645	TRMU	98	69.175	Colobus_angolensis_palliatus
ENSAMXG00000005282	trmu	99	70.833	ENSCGRG00001001739	Trmu	97	70.833	Cricetulus_griseus_chok1gshd
ENSAMXG00000005282	trmu	99	66.176	ENSCGRG00000002781	Trmu	97	66.176	Cricetulus_griseus_crigri
ENSAMXG00000005282	trmu	99	72.195	ENSCSEG00000012382	trmu	99	72.195	Cynoglossus_semilaevis
ENSAMXG00000005282	trmu	99	77.317	ENSCVAG00000001366	trmu	99	77.317	Cyprinodon_variegatus
ENSAMXG00000005282	trmu	99	78.973	ENSDARG00000043734	trmu	98	78.973	Danio_rerio
ENSAMXG00000005282	trmu	54	64.126	ENSDNOG00000047245	-	82	61.702	Dasypus_novemcinctus
ENSAMXG00000005282	trmu	99	69.100	ENSDORG00000007455	Trmu	100	69.100	Dipodomys_ordii
ENSAMXG00000005282	trmu	95	44.924	FBgn0040337	CG3021	97	44.949	Drosophila_melanogaster
ENSAMXG00000005282	trmu	94	54.847	ENSEBUG00000007454	trmu	99	53.757	Eptatretus_burgeri
ENSAMXG00000005282	trmu	96	72.658	ENSEASG00005021725	TRMU	94	72.658	Equus_asinus_asinus
ENSAMXG00000005282	trmu	96	72.658	ENSECAG00000000467	TRMU	94	72.658	Equus_caballus
ENSAMXG00000005282	trmu	67	52.899	ENSEEUG00000000074	-	66	52.899	Erinaceus_europaeus
ENSAMXG00000005282	trmu	99	77.240	ENSELUG00000009464	trmu	99	79.348	Esox_lucius
ENSAMXG00000005282	trmu	96	72.152	ENSFCAG00000006533	TRMU	98	69.492	Felis_catus
ENSAMXG00000005282	trmu	89	71.277	ENSFALG00000010035	TRMU	95	71.277	Ficedula_albicollis
ENSAMXG00000005282	trmu	93	69.452	ENSFDAG00000017472	TRMU	97	69.452	Fukomys_damarensis
ENSAMXG00000005282	trmu	99	76.829	ENSFHEG00000003162	trmu	98	78.474	Fundulus_heteroclitus
ENSAMXG00000005282	trmu	95	72.362	ENSGMOG00000001323	trmu	98	72.362	Gadus_morhua
ENSAMXG00000005282	trmu	98	70.120	ENSGALG00000031922	TRMU	98	70.120	Gallus_gallus
ENSAMXG00000005282	trmu	96	81.266	ENSGAFG00000013331	trmu	95	81.266	Gambusia_affinis
ENSAMXG00000005282	trmu	99	76.978	ENSGACG00000019024	trmu	99	76.978	Gasterosteus_aculeatus
ENSAMXG00000005282	trmu	99	70.388	ENSGGOG00000000203	TRMU	98	70.388	Gorilla_gorilla
ENSAMXG00000005282	trmu	99	78.729	ENSHBUG00000023421	trmu	98	80.217	Haplochromis_burtoni
ENSAMXG00000005282	trmu	98	70.171	ENSHGLG00000009278	TRMU	97	70.171	Heterocephalus_glaber_female
ENSAMXG00000005282	trmu	98	70.171	ENSHGLG00100018863	TRMU	97	70.171	Heterocephalus_glaber_male
ENSAMXG00000005282	trmu	99	78.883	ENSHCOG00000013459	trmu	99	78.883	Hippocampus_comes
ENSAMXG00000005282	trmu	98	85.679	ENSIPUG00000009785	trmu	99	85.679	Ictalurus_punctatus
ENSAMXG00000005282	trmu	99	70.588	ENSSTOG00000010993	TRMU	96	70.588	Ictidomys_tridecemlineatus
ENSAMXG00000005282	trmu	99	69.853	ENSJJAG00000000667	Trmu	97	69.853	Jaculus_jaculus
ENSAMXG00000005282	trmu	99	75.854	ENSKMAG00000008516	trmu	99	75.854	Kryptolebias_marmoratus
ENSAMXG00000005282	trmu	99	76.773	ENSLBEG00000018831	trmu	98	76.773	Labrus_bergylta
ENSAMXG00000005282	trmu	95	76.531	ENSLACG00000013713	TRMU	94	76.531	Latimeria_chalumnae
ENSAMXG00000005282	trmu	100	80.145	ENSLOCG00000016066	trmu	99	80.145	Lepisosteus_oculatus
ENSAMXG00000005282	trmu	95	63.731	ENSLAFG00000005129	TRMU	95	63.731	Loxodonta_africana
ENSAMXG00000005282	trmu	99	69.660	ENSMFAG00000039767	TRMU	98	69.660	Macaca_fascicularis
ENSAMXG00000005282	trmu	99	69.660	ENSMMUG00000000807	TRMU	98	69.660	Macaca_mulatta
ENSAMXG00000005282	trmu	99	69.660	ENSMNEG00000028164	TRMU	98	69.660	Macaca_nemestrina
ENSAMXG00000005282	trmu	99	69.417	ENSMLEG00000033884	TRMU	98	69.417	Mandrillus_leucophaeus
ENSAMXG00000005282	trmu	99	78.484	ENSMAMG00000004717	trmu	98	78.484	Mastacembelus_armatus
ENSAMXG00000005282	trmu	99	79.218	ENSMZEG00005015797	trmu	98	79.218	Maylandia_zebra
ENSAMXG00000005282	trmu	79	69.162	ENSMGAG00000007550	TRMU	98	69.162	Meleagris_gallopavo
ENSAMXG00000005282	trmu	99	70.588	ENSMAUG00000022282	Trmu	97	70.588	Mesocricetus_auratus
ENSAMXG00000005282	trmu	99	69.586	ENSMICG00000029046	TRMU	99	69.586	Microcebus_murinus
ENSAMXG00000005282	trmu	96	72.405	ENSMOCG00000014641	Trmu	95	72.405	Microtus_ochrogaster
ENSAMXG00000005282	trmu	99	77.995	ENSMMOG00000007229	trmu	98	77.995	Mola_mola
ENSAMXG00000005282	trmu	98	66.830	ENSMODG00000007433	TRMU	95	66.830	Monodelphis_domestica
ENSAMXG00000005282	trmu	99	79.218	ENSMALG00000007721	trmu	98	79.218	Monopterus_albus
ENSAMXG00000005282	trmu	99	70.098	MGP_CAROLIEiJ_G0020134	Trmu	88	80.460	Mus_caroli
ENSAMXG00000005282	trmu	99	70.343	ENSMUSG00000022386	Trmu	88	80.460	Mus_musculus
ENSAMXG00000005282	trmu	99	70.098	MGP_PahariEiJ_G0020139	Trmu	88	80.460	Mus_pahari
ENSAMXG00000005282	trmu	99	70.343	MGP_SPRETEiJ_G0021031	Trmu	88	80.460	Mus_spretus
ENSAMXG00000005282	trmu	99	69.343	ENSMPUG00000002523	TRMU	98	69.343	Mustela_putorius_furo
ENSAMXG00000005282	trmu	99	70.588	ENSNGAG00000005132	Trmu	97	70.588	Nannospalax_galili
ENSAMXG00000005282	trmu	99	79.218	ENSNBRG00000022690	trmu	99	79.753	Neolamprologus_brichardi
ENSAMXG00000005282	trmu	99	70.146	ENSNLEG00000015773	TRMU	98	70.146	Nomascus_leucogenys
ENSAMXG00000005282	trmu	79	60.061	ENSMEUG00000000216	TRMU	99	60.061	Notamacropus_eugenii
ENSAMXG00000005282	trmu	96	71.899	ENSODEG00000014745	TRMU	95	71.537	Octodon_degus
ENSAMXG00000005282	trmu	99	78.973	ENSONIG00000009821	trmu	98	78.973	Oreochromis_niloticus
ENSAMXG00000005282	trmu	93	66.581	ENSOANG00000001891	TRMU	98	66.581	Ornithorhynchus_anatinus
ENSAMXG00000005282	trmu	92	69.554	ENSOCUG00000003664	TRMU	95	68.421	Oryctolagus_cuniculus
ENSAMXG00000005282	trmu	99	73.415	ENSORLG00000019015	trmu	99	73.415	Oryzias_latipes
ENSAMXG00000005282	trmu	99	73.415	ENSORLG00020006830	trmu	99	73.415	Oryzias_latipes_hni
ENSAMXG00000005282	trmu	99	73.415	ENSORLG00015003907	trmu	99	73.415	Oryzias_latipes_hsok
ENSAMXG00000005282	trmu	57	75.105	ENSOMEG00000015541	trmu	86	75.105	Oryzias_melastigma
ENSAMXG00000005282	trmu	99	69.586	ENSOGAG00000008096	TRMU	99	69.586	Otolemur_garnettii
ENSAMXG00000005282	trmu	92	66.842	ENSOARG00000019475	TRMU	93	66.842	Ovis_aries
ENSAMXG00000005282	trmu	99	70.388	ENSPPAG00000033944	TRMU	98	70.388	Pan_paniscus
ENSAMXG00000005282	trmu	96	71.646	ENSPPRG00000004197	TRMU	98	69.343	Panthera_pardus
ENSAMXG00000005282	trmu	67	70.397	ENSPTIG00000014122	TRMU	97	72.243	Panthera_tigris_altaica
ENSAMXG00000005282	trmu	99	70.388	ENSPTRG00000014510	TRMU	98	70.388	Pan_troglodytes
ENSAMXG00000005282	trmu	96	71.899	ENSPANG00000023074	TRMU	93	70.286	Papio_anubis
ENSAMXG00000005282	trmu	99	78.345	ENSPKIG00000002849	trmu	99	78.345	Paramormyrops_kingsleyae
ENSAMXG00000005282	trmu	87	73.056	ENSPSIG00000013020	TRMU	94	73.056	Pelodiscus_sinensis
ENSAMXG00000005282	trmu	99	77.482	ENSPMGG00000004083	trmu	99	77.482	Periophthalmus_magnuspinnatus
ENSAMXG00000005282	trmu	96	71.899	ENSPEMG00000014007	Trmu	95	71.899	Peromyscus_maniculatus_bairdii
ENSAMXG00000005282	trmu	96	67.506	ENSPCIG00000009923	TRMU	97	65.860	Phascolarctos_cinereus
ENSAMXG00000005282	trmu	97	74.500	ENSPFOG00000008197	trmu	89	74.500	Poecilia_formosa
ENSAMXG00000005282	trmu	99	78.049	ENSPLAG00000008414	trmu	99	78.049	Poecilia_latipinna
ENSAMXG00000005282	trmu	99	78.293	ENSPMEG00000004326	trmu	99	78.293	Poecilia_mexicana
ENSAMXG00000005282	trmu	99	78.780	ENSPREG00000007980	trmu	99	78.780	Poecilia_reticulata
ENSAMXG00000005282	trmu	99	70.388	ENSPPYG00000011949	TRMU	98	70.388	Pongo_abelii
ENSAMXG00000005282	trmu	92	61.558	ENSPCAG00000013462	TRMU	99	61.558	Procavia_capensis
ENSAMXG00000005282	trmu	99	69.100	ENSPCOG00000016539	TRMU	99	69.100	Propithecus_coquereli
ENSAMXG00000005282	trmu	96	66.076	ENSPVAG00000013202	TRMU	95	66.076	Pteropus_vampyrus
ENSAMXG00000005282	trmu	99	79.218	ENSPNYG00000005629	trmu	98	79.218	Pundamilia_nyererei
ENSAMXG00000005282	trmu	100	89.346	ENSPNAG00000006339	trmu	97	89.346	Pygocentrus_nattereri
ENSAMXG00000005282	trmu	99	70.343	ENSRNOG00000016465	Trmu	97	70.343	Rattus_norvegicus
ENSAMXG00000005282	trmu	99	68.932	ENSRBIG00000038973	TRMU	98	68.932	Rhinopithecus_bieti
ENSAMXG00000005282	trmu	99	69.175	ENSRROG00000004267	TRMU	98	69.175	Rhinopithecus_roxellana
ENSAMXG00000005282	trmu	92	34.321	YDL033C	SLM3	91	34.321	Saccharomyces_cerevisiae
ENSAMXG00000005282	trmu	99	69.175	ENSSBOG00000030184	TRMU	98	69.175	Saimiri_boliviensis_boliviensis
ENSAMXG00000005282	trmu	90	77.568	ENSSFOG00015020664	trmu	97	77.568	Scleropages_formosus
ENSAMXG00000005282	trmu	100	77.778	ENSSMAG00000019450	trmu	99	77.778	Scophthalmus_maximus
ENSAMXG00000005282	trmu	99	78.780	ENSSDUG00000011913	trmu	99	78.780	Seriola_dumerili
ENSAMXG00000005282	trmu	99	78.537	ENSSLDG00000011684	trmu	99	78.537	Seriola_lalandi_dorsalis
ENSAMXG00000005282	trmu	95	67.120	ENSSPUG00000017123	TRMU	93	67.120	Sphenodon_punctatus
ENSAMXG00000005282	trmu	99	76.098	ENSSPAG00000021875	trmu	99	76.098	Stegastes_partitus
ENSAMXG00000005282	trmu	96	71.139	ENSSSCG00000000007	TRMU	94	71.139	Sus_scrofa
ENSAMXG00000005282	trmu	89	73.171	ENSTGUG00000003663	-	99	73.171	Taeniopygia_guttata
ENSAMXG00000005282	trmu	99	77.184	ENSTRUG00000001231	trmu	99	77.184	Takifugu_rubripes
ENSAMXG00000005282	trmu	99	76.886	ENSTNIG00000010484	trmu	97	76.886	Tetraodon_nigroviridis
ENSAMXG00000005282	trmu	76	53.782	ENSTBEG00000011276	-	79	53.782	Tupaia_belangeri
ENSAMXG00000005282	trmu	96	71.646	ENSTTRG00000004160	TRMU	94	71.646	Tursiops_truncatus
ENSAMXG00000005282	trmu	70	72.509	ENSUAMG00000024825	TRMU	97	72.509	Ursus_americanus
ENSAMXG00000005282	trmu	97	57.960	ENSUMAG00000019079	TRMU	97	71.094	Ursus_maritimus
ENSAMXG00000005282	trmu	53	62.557	ENSVPAG00000000685	-	100	62.557	Vicugna_pacos
ENSAMXG00000005282	trmu	100	68.765	ENSVVUG00000024963	TRMU	98	68.765	Vulpes_vulpes
ENSAMXG00000005282	trmu	96	73.990	ENSXETG00000023304	trmu	93	73.990	Xenopus_tropicalis
ENSAMXG00000005282	trmu	99	77.240	ENSXCOG00000015105	trmu	99	77.240	Xiphophorus_couchianus
ENSAMXG00000005282	trmu	99	79.512	ENSXMAG00000006697	trmu	99	79.512	Xiphophorus_maculatus