EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000005320 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: probable ribonuclease ZC3H12C
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 7981 bases
Position: chr12:16653153-16661133
Accession: 111188171
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000005455	RNase_Zc3h12a	PF11977.8	2.9e-64	1	1
ENSAMXP00000053950	RNase_Zc3h12a	PF11977.8	3.3e-64	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000042858	-	2475	-	ENSAMXP00000053950	824 (aa)	-	-
ENSAMXT00000005455	-	2298	XM_022674782	ENSAMXP00000005455	765 (aa)	XP_022530503	W5KCZ4

Gene Model

Click here to download ENSAMXG00000005320's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000005320's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000005320	-	100	89.975	ENSAMXG00000038308	-	100	89.975
ENSAMXG00000005320	-	91	45.087	ENSAMXG00000011328	zc3h12b	79	44.583

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000005320	-	99	43.916	ENSG00000102053	ZC3H12B	97	44.350	Homo_sapiens
ENSAMXG00000005320	-	87	47.564	ENSAPOG00000001738	zc3h12b	62	53.283	Acanthochromis_polyacanthus
ENSAMXG00000005320	-	79	46.924	ENSAMEG00000006955	ZC3H12B	97	49.035	Ailuropoda_melanoleuca
ENSAMXG00000005320	-	87	47.865	ENSACIG00000009787	zc3h12b	63	53.558	Amphilophus_citrinellus
ENSAMXG00000005320	-	100	49.306	ENSACIG00000005689	-	94	55.051	Amphilophus_citrinellus
ENSAMXG00000005320	-	87	47.692	ENSAOCG00000010094	zc3h12b	94	46.135	Amphiprion_ocellaris
ENSAMXG00000005320	-	87	47.692	ENSAPEG00000007479	zc3h12b	62	53.471	Amphiprion_percula
ENSAMXG00000005320	-	91	45.530	ENSATEG00000011175	zc3h12b	63	52.897	Anabas_testudineus
ENSAMXG00000005320	-	91	46.365	ENSACAG00000013582	ZC3H12B	90	47.952	Anolis_carolinensis
ENSAMXG00000005320	-	99	43.695	ENSANAG00000010296	ZC3H12B	91	50.347	Aotus_nancymaae
ENSAMXG00000005320	-	87	47.680	ENSACLG00000007669	zc3h12b	63	53.084	Astatotilapia_calliptera
ENSAMXG00000005320	-	99	43.157	ENSBTAG00000002206	ZC3H12B	98	43.682	Bos_taurus
ENSAMXG00000005320	-	99	44.088	ENSCJAG00000001427	ZC3H12B	91	50.953	Callithrix_jacchus
ENSAMXG00000005320	-	91	44.068	ENSCAFG00000031307	ZC3H12B	89	45.806	Canis_familiaris
ENSAMXG00000005320	-	91	44.068	ENSCAFG00020017995	ZC3H12B	89	45.806	Canis_lupus_dingo
ENSAMXG00000005320	-	73	43.932	ENSCHIG00000011723	ZC3H12B	85	56.135	Capra_hircus
ENSAMXG00000005320	-	91	45.773	ENSTSYG00000011302	ZC3H12B	59	53.600	Carlito_syrichta
ENSAMXG00000005320	-	77	41.888	ENSCAPG00000000650	ZC3H12B	99	42.950	Cavia_aperea
ENSAMXG00000005320	-	99	43.584	ENSCCAG00000030171	ZC3H12B	91	50.347	Cebus_capucinus
ENSAMXG00000005320	-	99	43.805	ENSCATG00000044845	ZC3H12B	97	44.228	Cercocebus_atys
ENSAMXG00000005320	-	99	43.159	ENSCLAG00000003600	ZC3H12B	91	50.174	Chinchilla_lanigera
ENSAMXG00000005320	-	91	45.107	ENSCPBG00000006983	ZC3H12B	95	45.592	Chrysemys_picta_bellii
ENSAMXG00000005320	-	99	43.805	ENSCANG00000006746	ZC3H12B	97	44.228	Colobus_angolensis_palliatus
ENSAMXG00000005320	-	91	44.270	ENSCGRG00001018643	Zc3h12b	81	53.737	Cricetulus_griseus_chok1gshd
ENSAMXG00000005320	-	91	44.270	ENSCGRG00000015623	Zc3h12b	81	53.737	Cricetulus_griseus_crigri
ENSAMXG00000005320	-	92	45.042	ENSCSEG00000013686	zc3h12b	82	53.924	Cynoglossus_semilaevis
ENSAMXG00000005320	-	87	46.015	ENSCVAG00000010473	zc3h12b	80	53.722	Cyprinodon_variegatus
ENSAMXG00000005320	-	74	57.081	ENSDARG00000062463	zc3h12b	88	51.718	Danio_rerio
ENSAMXG00000005320	-	87	47.051	ENSDNOG00000038439	ZC3H12B	84	53.800	Dasypus_novemcinctus
ENSAMXG00000005320	-	99	43.695	ENSDORG00000024832	Zc3h12b	91	50.694	Dipodomys_ordii
ENSAMXG00000005320	-	81	42.420	ENSETEG00000012095	ZC3H12B	83	43.390	Echinops_telfairi
ENSAMXG00000005320	-	99	40.066	ENSEASG00005006995	ZC3H12B	68	44.118	Equus_asinus_asinus
ENSAMXG00000005320	-	99	43.598	ENSECAG00000020993	ZC3H12B	99	53.892	Equus_caballus
ENSAMXG00000005320	-	91	46.279	ENSELUG00000010689	zc3h12b	78	52.182	Esox_lucius
ENSAMXG00000005320	-	96	44.330	ENSFCAG00000032299	ZC3H12B	94	44.737	Felis_catus
ENSAMXG00000005320	-	91	45.697	ENSFDAG00000014258	ZC3H12B	82	54.800	Fukomys_damarensis
ENSAMXG00000005320	-	99	43.960	ENSFHEG00000014717	-	79	69.231	Fundulus_heteroclitus
ENSAMXG00000005320	-	87	45.949	ENSFHEG00000002391	zc3h12b	58	54.200	Fundulus_heteroclitus
ENSAMXG00000005320	-	91	46.667	ENSGALG00000039391	ZC3H12B	81	56.162	Gallus_gallus
ENSAMXG00000005320	-	99	43.497	ENSGAFG00000004701	-	86	51.232	Gambusia_affinis
ENSAMXG00000005320	-	87	46.879	ENSGAFG00000006871	zc3h12b	89	50.694	Gambusia_affinis
ENSAMXG00000005320	-	91	45.346	ENSGAGG00000005569	ZC3H12B	86	52.996	Gopherus_agassizii
ENSAMXG00000005320	-	99	43.916	ENSGGOG00000024638	ZC3H12B	97	44.350	Gorilla_gorilla
ENSAMXG00000005320	-	69	59.821	ENSHBUG00000003376	-	99	47.172	Haplochromis_burtoni
ENSAMXG00000005320	-	87	47.809	ENSHBUG00000000645	zc3h12b	63	53.271	Haplochromis_burtoni
ENSAMXG00000005320	-	99	43.016	ENSHGLG00000003107	ZC3H12B	91	49.303	Heterocephalus_glaber_female
ENSAMXG00000005320	-	99	43.016	ENSHGLG00100010721	ZC3H12B	91	49.303	Heterocephalus_glaber_male
ENSAMXG00000005320	-	52	67.241	ENSHCOG00000017425	-	91	64.000	Hippocampus_comes
ENSAMXG00000005320	-	96	44.610	ENSHCOG00000008487	zc3h12b	95	46.058	Hippocampus_comes
ENSAMXG00000005320	-	91	46.065	ENSIPUG00000016745	zc3h12b	81	45.849	Ictalurus_punctatus
ENSAMXG00000005320	-	100	77.210	ENSIPUG00000014830	-	100	76.463	Ictalurus_punctatus
ENSAMXG00000005320	-	91	45.091	ENSSTOG00000020962	ZC3H12B	91	50.347	Ictidomys_tridecemlineatus
ENSAMXG00000005320	-	95	43.713	ENSJJAG00000015755	Zc3h12b	98	42.840	Jaculus_jaculus
ENSAMXG00000005320	-	87	46.232	ENSKMAG00000004921	zc3h12b	81	54.032	Kryptolebias_marmoratus
ENSAMXG00000005320	-	87	46.776	ENSLBEG00000006448	zc3h12b	85	51.673	Labrus_bergylta
ENSAMXG00000005320	-	94	44.959	ENSLACG00000014526	ZC3H12B	90	50.687	Latimeria_chalumnae
ENSAMXG00000005320	-	99	44.432	ENSLOCG00000014631	zc3h12b	83	46.591	Lepisosteus_oculatus
ENSAMXG00000005320	-	100	57.486	ENSLOCG00000010717	-	97	57.943	Lepisosteus_oculatus
ENSAMXG00000005320	-	99	43.805	ENSMFAG00000042237	ZC3H12B	97	44.228	Macaca_fascicularis
ENSAMXG00000005320	-	99	43.805	ENSMMUG00000012261	ZC3H12B	97	44.228	Macaca_mulatta
ENSAMXG00000005320	-	99	43.805	ENSMNEG00000043003	ZC3H12B	97	44.228	Macaca_nemestrina
ENSAMXG00000005320	-	99	43.805	ENSMLEG00000042630	ZC3H12B	97	44.228	Mandrillus_leucophaeus
ENSAMXG00000005320	-	87	47.219	ENSMAMG00000011770	zc3h12b	63	52.908	Mastacembelus_armatus
ENSAMXG00000005320	-	87	47.680	ENSMZEG00005007548	zc3h12b	63	53.084	Maylandia_zebra
ENSAMXG00000005320	-	91	46.539	ENSMGAG00000000759	ZC3H12B	88	52.679	Meleagris_gallopavo
ENSAMXG00000005320	-	99	43.425	ENSMICG00000010697	ZC3H12B	91	50.086	Microcebus_murinus
ENSAMXG00000005320	-	91	44.873	ENSMOCG00000000094	Zc3h12b	89	45.539	Microtus_ochrogaster
ENSAMXG00000005320	-	91	46.024	ENSMMOG00000008734	zc3h12b	63	52.788	Mola_mola
ENSAMXG00000005320	-	87	45.817	ENSMODG00000005206	ZC3H12B	91	45.882	Monodelphis_domestica
ENSAMXG00000005320	-	99	48.618	ENSMALG00000016807	-	99	48.899	Monopterus_albus
ENSAMXG00000005320	-	87	44.557	ENSMALG00000021153	zc3h12b	60	50.198	Monopterus_albus
ENSAMXG00000005320	-	99	43.157	ENSMUSG00000035045	Zc3h12b	66	91.429	Mus_musculus
ENSAMXG00000005320	-	99	43.046	MGP_PahariEiJ_G0031787	Zc3h12b	90	49.736	Mus_pahari
ENSAMXG00000005320	-	99	43.157	MGP_SPRETEiJ_G0034413	Zc3h12b	90	49.912	Mus_spretus
ENSAMXG00000005320	-	99	42.286	ENSMPUG00000001162	ZC3H12B	91	48.958	Mustela_putorius_furo
ENSAMXG00000005320	-	95	44.367	ENSMLUG00000013635	ZC3H12B	95	45.536	Myotis_lucifugus
ENSAMXG00000005320	-	87	47.294	ENSNBRG00000014889	zc3h12b	63	53.084	Neolamprologus_brichardi
ENSAMXG00000005320	-	99	43.805	ENSNLEG00000000383	ZC3H12B	93	45.133	Nomascus_leucogenys
ENSAMXG00000005320	-	91	46.710	ENSMEUG00000014075	ZC3H12B	95	45.801	Notamacropus_eugenii
ENSAMXG00000005320	-	87	47.429	ENSONIG00000012867	zc3h12b	63	53.096	Oreochromis_niloticus
ENSAMXG00000005320	-	99	43.632	ENSOCUG00000006130	ZC3H12B	98	44.673	Oryctolagus_cuniculus
ENSAMXG00000005320	-	87	47.021	ENSORLG00000009556	zc3h12b	94	45.522	Oryzias_latipes
ENSAMXG00000005320	-	99	43.252	ENSORLG00000009188	-	97	69.725	Oryzias_latipes
ENSAMXG00000005320	-	87	47.021	ENSORLG00020021793	zc3h12b	94	45.488	Oryzias_latipes_hni
ENSAMXG00000005320	-	99	42.191	ENSORLG00020019033	-	96	69.162	Oryzias_latipes_hni
ENSAMXG00000005320	-	87	47.150	ENSORLG00015004818	zc3h12b	94	45.612	Oryzias_latipes_hsok
ENSAMXG00000005320	-	89	49.752	ENSORLG00015020619	-	97	67.568	Oryzias_latipes_hsok
ENSAMXG00000005320	-	87	46.839	ENSOMEG00000005768	zc3h12b	95	45.601	Oryzias_melastigma
ENSAMXG00000005320	-	99	44.482	ENSOMEG00000018642	-	78	62.143	Oryzias_melastigma
ENSAMXG00000005320	-	99	43.363	ENSOGAG00000029439	ZC3H12B	98	44.015	Otolemur_garnettii
ENSAMXG00000005320	-	99	43.348	ENSOARG00000004959	ZC3H12B	98	43.705	Ovis_aries
ENSAMXG00000005320	-	99	43.916	ENSPPAG00000039530	ZC3H12B	97	44.350	Pan_paniscus
ENSAMXG00000005320	-	79	46.439	ENSPPRG00000004966	-	83	59.682	Panthera_pardus
ENSAMXG00000005320	-	79	46.695	ENSPTIG00000005571	ZC3H12B	88	60.377	Panthera_tigris_altaica
ENSAMXG00000005320	-	99	43.916	ENSPTRG00000021969	ZC3H12B	97	44.350	Pan_troglodytes
ENSAMXG00000005320	-	99	43.805	ENSPANG00000007944	ZC3H12B	97	44.228	Papio_anubis
ENSAMXG00000005320	-	86	47.662	ENSPKIG00000019893	ZC3H12B	97	46.061	Paramormyrops_kingsleyae
ENSAMXG00000005320	-	74	59.864	ENSPKIG00000012946	zc3h12b	78	55.694	Paramormyrops_kingsleyae
ENSAMXG00000005320	-	100	52.220	ENSPKIG00000012595	-	95	51.921	Paramormyrops_kingsleyae
ENSAMXG00000005320	-	95	44.737	ENSPSIG00000016853	ZC3H12B	86	52.996	Pelodiscus_sinensis
ENSAMXG00000005320	-	91	44.982	ENSPMGG00000006009	zc3h12b	94	45.271	Periophthalmus_magnuspinnatus
ENSAMXG00000005320	-	87	47.619	ENSPCIG00000020264	ZC3H12B	90	46.518	Phascolarctos_cinereus
ENSAMXG00000005320	-	87	46.684	ENSPFOG00000019365	zc3h12b	80	53.877	Poecilia_formosa
ENSAMXG00000005320	-	87	46.433	ENSPLAG00000011981	zc3h12b	89	43.115	Poecilia_latipinna
ENSAMXG00000005320	-	87	43.806	ENSPMEG00000002552	zc3h12b	80	49.203	Poecilia_mexicana
ENSAMXG00000005320	-	87	46.252	ENSPREG00000020794	zc3h12b	80	53.586	Poecilia_reticulata
ENSAMXG00000005320	-	96	44.313	ENSPPYG00000020416	ZC3H12B	94	45.098	Pongo_abelii
ENSAMXG00000005320	-	75	58.019	ENSPCAG00000016422	ZC3H12B	75	58.042	Procavia_capensis
ENSAMXG00000005320	-	99	43.488	ENSPCOG00000020467	ZC3H12B	89	46.605	Propithecus_coquereli
ENSAMXG00000005320	-	91	39.578	ENSPVAG00000017352	ZC3H12B	76	50.000	Pteropus_vampyrus
ENSAMXG00000005320	-	87	47.680	ENSPNYG00000018012	zc3h12b	63	53.645	Pundamilia_nyererei
ENSAMXG00000005320	-	69	59.821	ENSPNYG00000007151	-	99	49.701	Pundamilia_nyererei
ENSAMXG00000005320	-	91	46.946	ENSPNAG00000002567	zc3h12b	89	46.479	Pygocentrus_nattereri
ENSAMXG00000005320	-	100	87.234	ENSPNAG00000017483	-	100	86.483	Pygocentrus_nattereri
ENSAMXG00000005320	-	91	45.006	ENSRNOG00000011508	Zc3h12b	77	62.205	Rattus_norvegicus
ENSAMXG00000005320	-	99	43.805	ENSRBIG00000036402	ZC3H12B	97	44.228	Rhinopithecus_bieti
ENSAMXG00000005320	-	99	43.805	ENSRROG00000036004	ZC3H12B	97	44.228	Rhinopithecus_roxellana
ENSAMXG00000005320	-	99	43.695	ENSSBOG00000004095	ZC3H12B	91	50.347	Saimiri_boliviensis_boliviensis
ENSAMXG00000005320	-	91	47.152	ENSSFOG00015008769	zc3h12b	52	58.730	Scleropages_formosus
ENSAMXG00000005320	-	99	42.889	ENSSFOG00015012866	ZC3H12B	96	44.580	Scleropages_formosus
ENSAMXG00000005320	-	87	47.254	ENSSMAG00000018309	zc3h12b	64	52.996	Scophthalmus_maximus
ENSAMXG00000005320	-	91	45.325	ENSSDUG00000014078	zc3h12b	84	66.814	Seriola_dumerili
ENSAMXG00000005320	-	91	44.848	ENSSLDG00000018895	zc3h12b	94	45.069	Seriola_lalandi_dorsalis
ENSAMXG00000005320	-	91	38.039	ENSSARG00000002292	ZC3H12B	73	49.067	Sorex_araneus
ENSAMXG00000005320	-	91	43.985	ENSSPUG00000014175	ZC3H12B	65	53.711	Sphenodon_punctatus
ENSAMXG00000005320	-	87	47.436	ENSSPAG00000022460	zc3h12b	94	45.885	Stegastes_partitus
ENSAMXG00000005320	-	99	42.308	ENSSSCG00000012367	ZC3H12B	91	49.132	Sus_scrofa
ENSAMXG00000005320	-	91	47.024	ENSTGUG00000002846	ZC3H12B	82	55.010	Taeniopygia_guttata
ENSAMXG00000005320	-	91	45.224	ENSTRUG00000012186	zc3h12b	62	52.800	Takifugu_rubripes
ENSAMXG00000005320	-	91	45.568	ENSTNIG00000011828	zc3h12b	80	54.818	Tetraodon_nigroviridis
ENSAMXG00000005320	-	78	48.780	ENSTNIG00000015684	-	99	55.688	Tetraodon_nigroviridis
ENSAMXG00000005320	-	86	44.884	ENSTBEG00000011540	ZC3H12B	84	49.672	Tupaia_belangeri
ENSAMXG00000005320	-	82	49.020	ENSTTRG00000007468	ZC3H12B	72	83.333	Tursiops_truncatus
ENSAMXG00000005320	-	99	43.285	ENSUAMG00000005098	ZC3H12B	98	43.636	Ursus_americanus
ENSAMXG00000005320	-	99	43.285	ENSUMAG00000017054	ZC3H12B	98	43.636	Ursus_maritimus
ENSAMXG00000005320	-	96	40.974	ENSVPAG00000009070	ZC3H12B	76	55.941	Vicugna_pacos
ENSAMXG00000005320	-	91	43.947	ENSVVUG00000022686	ZC3H12B	89	45.672	Vulpes_vulpes
ENSAMXG00000005320	-	95	40.987	ENSXETG00000017794	zc3h12b	93	41.199	Xenopus_tropicalis
ENSAMXG00000005320	-	98	45.923	ENSXCOG00000007996	-	89	68.595	Xiphophorus_couchianus
ENSAMXG00000005320	-	87	46.814	ENSXCOG00000006151	zc3h12b	81	53.968	Xiphophorus_couchianus
ENSAMXG00000005320	-	87	46.692	ENSXMAG00000018548	zc3h12b	80	53.968	Xiphophorus_maculatus