EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000005418 (Gene tree)
Gene ID: 103030073
Gene Symbol: pan2
Alias: fc27e10|si:dkey-126g1.10|wu:fc27e10
Full Name: poly(A) specific ribonuclease subunit PAN2
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 18254 bases
Position: chr15:3622264-3640517
Accession: 103030073
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000005548	RNase_T	PF00929.24	1.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000005548	-	3642	XM_007235715	ENSAMXP00000005548	1213 (aa)	XP_007235777	W5KD87

Gene Model

Click here to download ENSAMXG00000005418's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000005418's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000005418	pan2	98	87.927	ENSAPOG00000022955	pan2	99	87.864	Acanthochromis_polyacanthus
ENSAMXG00000005418	pan2	98	75.498	ENSAMEG00000003824	PAN2	99	75.498	Ailuropoda_melanoleuca
ENSAMXG00000005418	pan2	97	68.182	ENSACIG00000012858	PAN2	99	68.182	Amphilophus_citrinellus
ENSAMXG00000005418	pan2	98	84.378	ENSACIG00000013079	pan2	99	84.365	Amphilophus_citrinellus
ENSAMXG00000005418	pan2	98	87.604	ENSAOCG00000022334	pan2	99	87.604	Amphiprion_ocellaris
ENSAMXG00000005418	pan2	98	87.542	ENSAPEG00000022760	pan2	99	87.542	Amphiprion_percula
ENSAMXG00000005418	pan2	97	87.899	ENSATEG00000024030	pan2	99	87.930	Anabas_testudineus
ENSAMXG00000005418	pan2	92	76.923	ENSAPLG00000005195	PAN2	100	76.923	Anas_platyrhynchos
ENSAMXG00000005418	pan2	98	76.878	ENSACAG00000007067	PAN2	99	76.878	Anolis_carolinensis
ENSAMXG00000005418	pan2	98	74.979	ENSANAG00000036468	PAN2	95	83.287	Aotus_nancymaae
ENSAMXG00000005418	pan2	97	66.525	ENSACLG00000023821	pan2	99	66.356	Astatotilapia_calliptera
ENSAMXG00000005418	pan2	98	87.323	ENSACLG00000023674	pan2	99	87.396	Astatotilapia_calliptera
ENSAMXG00000005418	pan2	98	75.229	ENSBTAG00000004376	PAN2	99	75.229	Bos_taurus
ENSAMXG00000005418	pan2	98	75.166	ENSCJAG00000011141	PAN2	99	75.166	Callithrix_jacchus
ENSAMXG00000005418	pan2	98	75.229	ENSCAFG00000000119	PAN2	92	83.520	Canis_familiaris
ENSAMXG00000005418	pan2	98	75.000	ENSCAFG00020024865	PAN2	99	74.395	Canis_lupus_dingo
ENSAMXG00000005418	pan2	99	74.302	ENSCHIG00000026935	PAN2	100	73.892	Capra_hircus
ENSAMXG00000005418	pan2	98	74.484	ENSTSYG00000006927	PAN2	95	83.287	Carlito_syrichta
ENSAMXG00000005418	pan2	98	75.041	ENSCPOG00000014918	PAN2	99	74.628	Cavia_porcellus
ENSAMXG00000005418	pan2	98	75.332	ENSCCAG00000036637	PAN2	95	83.287	Cebus_capucinus
ENSAMXG00000005418	pan2	99	74.424	ENSCATG00000045076	PAN2	94	83.989	Cercocebus_atys
ENSAMXG00000005418	pan2	98	75.083	ENSCLAG00000011700	PAN2	99	74.586	Chinchilla_lanigera
ENSAMXG00000005418	pan2	98	75.083	ENSCSAG00000005173	PAN2	99	75.083	Chlorocebus_sabaeus
ENSAMXG00000005418	pan2	98	76.769	ENSCPBG00000014029	PAN2	99	76.923	Chrysemys_picta_bellii
ENSAMXG00000005418	pan2	90	45.812	ENSCSAVG00000003833	-	97	60.933	Ciona_savignyi
ENSAMXG00000005418	pan2	98	73.920	ENSCANG00000017798	PAN2	99	73.920	Colobus_angolensis_palliatus
ENSAMXG00000005418	pan2	99	75.145	ENSCGRG00001019707	Pan2	100	75.145	Cricetulus_griseus_chok1gshd
ENSAMXG00000005418	pan2	99	74.487	ENSCGRG00000009996	Pan2	100	74.159	Cricetulus_griseus_crigri
ENSAMXG00000005418	pan2	98	82.972	ENSCSEG00000021529	pan2	100	82.972	Cynoglossus_semilaevis
ENSAMXG00000005418	pan2	98	86.880	ENSCVAG00000010197	pan2	99	86.880	Cyprinodon_variegatus
ENSAMXG00000005418	pan2	98	88.304	ENSDARG00000074675	pan2	99	88.167	Danio_rerio
ENSAMXG00000005418	pan2	98	75.646	ENSDNOG00000010940	PAN2	99	75.646	Dasypus_novemcinctus
ENSAMXG00000005418	pan2	92	41.749	FBgn0033352	PAN2	96	41.201	Drosophila_melanogaster
ENSAMXG00000005418	pan2	74	84.463	ENSETEG00000012041	PAN2	81	85.260	Echinops_telfairi
ENSAMXG00000005418	pan2	97	57.650	ENSEBUG00000002773	pan2	98	57.359	Eptatretus_burgeri
ENSAMXG00000005418	pan2	98	75.481	ENSEASG00005005235	PAN2	99	75.314	Equus_asinus_asinus
ENSAMXG00000005418	pan2	98	75.354	ENSECAG00000019814	PAN2	99	75.229	Equus_caballus
ENSAMXG00000005418	pan2	98	86.860	ENSELUG00000024604	pan2	99	86.573	Esox_lucius
ENSAMXG00000005418	pan2	98	75.415	ENSFCAG00000012021	PAN2	99	75.415	Felis_catus
ENSAMXG00000005418	pan2	98	76.421	ENSFALG00000000464	PAN2	98	76.338	Ficedula_albicollis
ENSAMXG00000005418	pan2	98	75.103	ENSFDAG00000017104	PAN2	99	74.773	Fukomys_damarensis
ENSAMXG00000005418	pan2	89	85.377	ENSFHEG00000000157	pan2	97	85.377	Fundulus_heteroclitus
ENSAMXG00000005418	pan2	99	85.443	ENSGMOG00000007249	pan2	99	85.443	Gadus_morhua
ENSAMXG00000005418	pan2	98	77.500	ENSGALG00000031512	PAN2	99	77.500	Gallus_gallus
ENSAMXG00000005418	pan2	98	86.656	ENSGAFG00000000284	pan2	99	86.656	Gambusia_affinis
ENSAMXG00000005418	pan2	98	85.583	ENSGACG00000010722	pan2	99	85.149	Gasterosteus_aculeatus
ENSAMXG00000005418	pan2	98	76.294	ENSGAGG00000007868	PAN2	99	76.210	Gopherus_agassizii
ENSAMXG00000005418	pan2	98	75.166	ENSGGOG00000009115	PAN2	94	83.989	Gorilla_gorilla
ENSAMXG00000005418	pan2	98	87.396	ENSHBUG00000005234	pan2	99	87.396	Haplochromis_burtoni
ENSAMXG00000005418	pan2	98	74.773	ENSHGLG00000005647	PAN2	99	74.359	Heterocephalus_glaber_female
ENSAMXG00000005418	pan2	98	74.607	ENSHGLG00100014057	PAN2	99	74.194	Heterocephalus_glaber_male
ENSAMXG00000005418	pan2	98	85.643	ENSHCOG00000007920	pan2	99	85.643	Hippocampus_comes
ENSAMXG00000005418	pan2	98	89.950	ENSIPUG00000011065	PAN2	99	89.474	Ictalurus_punctatus
ENSAMXG00000005418	pan2	93	74.795	ENSSTOG00000015974	PAN2	99	74.693	Ictidomys_tridecemlineatus
ENSAMXG00000005418	pan2	98	75.208	ENSJJAG00000013044	Pan2	97	75.208	Jaculus_jaculus
ENSAMXG00000005418	pan2	98	86.439	ENSKMAG00000006192	pan2	99	86.439	Kryptolebias_marmoratus
ENSAMXG00000005418	pan2	98	81.811	ENSLBEG00000015763	pan2	99	89.625	Labrus_bergylta
ENSAMXG00000005418	pan2	98	71.196	ENSLACG00000018694	PAN2	99	70.722	Latimeria_chalumnae
ENSAMXG00000005418	pan2	98	86.239	ENSLOCG00000004333	pan2	99	85.797	Lepisosteus_oculatus
ENSAMXG00000005418	pan2	98	73.118	ENSLAFG00000014873	PAN2	99	72.622	Loxodonta_africana
ENSAMXG00000005418	pan2	98	74.896	ENSMFAG00000002293	PAN2	94	83.989	Macaca_fascicularis
ENSAMXG00000005418	pan2	98	74.896	ENSMMUG00000013482	PAN2	92	83.989	Macaca_mulatta
ENSAMXG00000005418	pan2	98	74.979	ENSMNEG00000033264	PAN2	95	83.473	Macaca_nemestrina
ENSAMXG00000005418	pan2	99	74.342	ENSMLEG00000037388	PAN2	94	83.989	Mandrillus_leucophaeus
ENSAMXG00000005418	pan2	98	87.573	ENSMAMG00000001624	pan2	99	87.573	Mastacembelus_armatus
ENSAMXG00000005418	pan2	95	69.058	ENSMZEG00005026472	pan2	97	68.971	Maylandia_zebra
ENSAMXG00000005418	pan2	98	87.323	ENSMZEG00005026462	pan2	99	87.396	Maylandia_zebra
ENSAMXG00000005418	pan2	95	77.597	ENSMGAG00000001439	PAN2	99	77.597	Meleagris_gallopavo
ENSAMXG00000005418	pan2	98	74.732	ENSMAUG00000012602	Pan2	99	74.484	Mesocricetus_auratus
ENSAMXG00000005418	pan2	98	75.062	ENSMICG00000017661	PAN2	95	81.972	Microcebus_murinus
ENSAMXG00000005418	pan2	99	74.814	ENSMOCG00000007191	Pan2	100	74.814	Microtus_ochrogaster
ENSAMXG00000005418	pan2	98	87.458	ENSMMOG00000009313	pan2	97	87.479	Mola_mola
ENSAMXG00000005418	pan2	98	87.531	ENSMALG00000013377	pan2	99	87.531	Monopterus_albus
ENSAMXG00000005418	pan2	98	74.276	MGP_CAROLIEiJ_G0015930	Pan2	99	73.863	Mus_caroli
ENSAMXG00000005418	pan2	98	75.000	ENSMUSG00000005682	Pan2	99	74.750	Mus_musculus
ENSAMXG00000005418	pan2	98	74.442	MGP_PahariEiJ_G0031154	Pan2	99	74.028	Mus_pahari
ENSAMXG00000005418	pan2	98	75.000	MGP_SPRETEiJ_G0016755	Pan2	99	75.000	Mus_spretus
ENSAMXG00000005418	pan2	98	75.312	ENSMPUG00000001383	PAN2	99	75.312	Mustela_putorius_furo
ENSAMXG00000005418	pan2	98	74.896	ENSMLUG00000006737	PAN2	99	74.896	Myotis_lucifugus
ENSAMXG00000005418	pan2	98	75.478	ENSNGAG00000007930	Pan2	99	75.478	Nannospalax_galili
ENSAMXG00000005418	pan2	90	93.750	ENSNBRG00000006585	pan2	98	93.750	Neolamprologus_brichardi
ENSAMXG00000005418	pan2	98	71.334	ENSNLEG00000017499	PAN2	95	83.193	Nomascus_leucogenys
ENSAMXG00000005418	pan2	98	76.349	ENSMEUG00000010125	PAN2	99	76.266	Notamacropus_eugenii
ENSAMXG00000005418	pan2	98	74.378	ENSOPRG00000001468	PAN2	99	74.378	Ochotona_princeps
ENSAMXG00000005418	pan2	98	74.670	ENSODEG00000007203	PAN2	99	74.422	Octodon_degus
ENSAMXG00000005418	pan2	98	86.672	ENSONIG00000016732	pan2	99	86.507	Oreochromis_niloticus
ENSAMXG00000005418	pan2	81	66.866	ENSOANG00000005151	PAN2	99	66.139	Ornithorhynchus_anatinus
ENSAMXG00000005418	pan2	98	74.732	ENSOCUG00000007227	PAN2	99	74.236	Oryctolagus_cuniculus
ENSAMXG00000005418	pan2	98	85.083	ENSORLG00000015195	pan2	99	85.167	Oryzias_latipes
ENSAMXG00000005418	pan2	98	85.750	ENSORLG00020000277	pan2	99	85.250	Oryzias_latipes_hni
ENSAMXG00000005418	pan2	98	85.000	ENSORLG00015005193	pan2	99	85.083	Oryzias_latipes_hsok
ENSAMXG00000005418	pan2	98	85.417	ENSOMEG00000022087	pan2	99	85.500	Oryzias_melastigma
ENSAMXG00000005418	pan2	98	74.279	ENSOGAG00000030620	PAN2	99	73.866	Otolemur_garnettii
ENSAMXG00000005418	pan2	98	75.374	ENSOARG00000009379	PAN2	99	75.249	Ovis_aries
ENSAMXG00000005418	pan2	98	74.979	ENSPPAG00000001208	PAN2	94	83.989	Pan_paniscus
ENSAMXG00000005418	pan2	98	75.332	ENSPPRG00000021586	PAN2	99	75.332	Panthera_pardus
ENSAMXG00000005418	pan2	98	71.570	ENSPTIG00000012494	PAN2	99	71.570	Panthera_tigris_altaica
ENSAMXG00000005418	pan2	98	74.979	ENSPTRG00000052054	PAN2	94	83.989	Pan_troglodytes
ENSAMXG00000005418	pan2	91	76.216	ENSPANG00000018906	PAN2	94	83.989	Papio_anubis
ENSAMXG00000005418	pan2	98	85.571	ENSPKIG00000003973	pan2	99	85.571	Paramormyrops_kingsleyae
ENSAMXG00000005418	pan2	99	73.576	ENSPSIG00000003267	PAN2	100	73.576	Pelodiscus_sinensis
ENSAMXG00000005418	pan2	98	86.661	ENSPMGG00000023186	pan2	99	86.577	Periophthalmus_magnuspinnatus
ENSAMXG00000005418	pan2	98	74.319	ENSPEMG00000018505	Pan2	99	73.988	Peromyscus_maniculatus_bairdii
ENSAMXG00000005418	pan2	90	67.212	ENSPMAG00000004731	pan2	100	67.030	Petromyzon_marinus
ENSAMXG00000005418	pan2	98	76.808	ENSPCIG00000024643	PAN2	99	76.475	Phascolarctos_cinereus
ENSAMXG00000005418	pan2	98	86.606	ENSPFOG00000008392	pan2	99	86.617	Poecilia_formosa
ENSAMXG00000005418	pan2	98	86.778	ENSPLAG00000009198	pan2	99	86.617	Poecilia_latipinna
ENSAMXG00000005418	pan2	98	87.479	ENSPMEG00000001484	pan2	99	87.479	Poecilia_mexicana
ENSAMXG00000005418	pan2	98	87.300	ENSPREG00000000900	pan2	99	87.300	Poecilia_reticulata
ENSAMXG00000005418	pan2	87	78.729	ENSPPYG00000004656	PAN2	98	78.729	Pongo_abelii
ENSAMXG00000005418	pan2	91	76.079	ENSPCAG00000011047	PAN2	99	76.079	Procavia_capensis
ENSAMXG00000005418	pan2	98	75.229	ENSPCOG00000018263	PAN2	99	75.229	Propithecus_coquereli
ENSAMXG00000005418	pan2	93	72.746	ENSPVAG00000007591	PAN2	94	72.746	Pteropus_vampyrus
ENSAMXG00000005418	pan2	98	87.406	ENSPNYG00000002629	pan2	99	87.479	Pundamilia_nyererei
ENSAMXG00000005418	pan2	98	93.734	ENSPNAG00000027140	pan2	99	93.734	Pygocentrus_nattereri
ENSAMXG00000005418	pan2	99	74.690	ENSRNOG00000032441	Pan2	100	74.442	Rattus_norvegicus
ENSAMXG00000005418	pan2	98	75.000	ENSRBIG00000029591	PAN2	95	82.961	Rhinopithecus_bieti
ENSAMXG00000005418	pan2	98	75.000	ENSRROG00000041950	PAN2	95	83.240	Rhinopithecus_roxellana
ENSAMXG00000005418	pan2	98	74.979	ENSSBOG00000027343	PAN2	95	83.287	Saimiri_boliviensis_boliviensis
ENSAMXG00000005418	pan2	91	76.161	ENSSHAG00000000122	PAN2	99	77.162	Sarcophilus_harrisii
ENSAMXG00000005418	pan2	98	86.261	ENSSFOG00015017740	pan2	99	86.261	Scleropages_formosus
ENSAMXG00000005418	pan2	98	86.611	ENSSMAG00000020901	pan2	99	86.778	Scophthalmus_maximus
ENSAMXG00000005418	pan2	98	87.677	ENSSDUG00000001840	pan2	99	87.708	Seriola_dumerili
ENSAMXG00000005418	pan2	98	87.772	ENSSLDG00000013866	pan2	99	87.772	Seriola_lalandi_dorsalis
ENSAMXG00000005418	pan2	91	75.000	ENSSARG00000013350	PAN2	92	75.000	Sorex_araneus
ENSAMXG00000005418	pan2	91	78.159	ENSSPUG00000004270	PAN2	98	78.069	Sphenodon_punctatus
ENSAMXG00000005418	pan2	98	88.033	ENSSPAG00000019970	pan2	99	88.033	Stegastes_partitus
ENSAMXG00000005418	pan2	98	74.730	ENSSSCG00000000393	PAN2	99	74.730	Sus_scrofa
ENSAMXG00000005418	pan2	98	86.201	ENSTRUG00000014260	pan2	99	86.201	Takifugu_rubripes
ENSAMXG00000005418	pan2	98	85.667	ENSTNIG00000012537	pan2	99	85.702	Tetraodon_nigroviridis
ENSAMXG00000005418	pan2	78	75.908	ENSTTRG00000007150	PAN2	80	75.908	Tursiops_truncatus
ENSAMXG00000005418	pan2	98	75.669	ENSUAMG00000026522	PAN2	99	75.502	Ursus_americanus
ENSAMXG00000005418	pan2	98	74.670	ENSUMAG00000017020	PAN2	99	74.587	Ursus_maritimus
ENSAMXG00000005418	pan2	73	91.133	ENSVPAG00000007309	PAN2	80	91.133	Vicugna_pacos
ENSAMXG00000005418	pan2	98	75.229	ENSVVUG00000021878	PAN2	99	75.229	Vulpes_vulpes
ENSAMXG00000005418	pan2	98	74.524	ENSXETG00000009434	pan2	100	75.274	Xenopus_tropicalis
ENSAMXG00000005418	pan2	98	83.179	ENSXCOG00000014391	pan2	99	83.179	Xiphophorus_couchianus
ENSAMXG00000005418	pan2	98	86.739	ENSXMAG00000011661	pan2	99	86.543	Xiphophorus_maculatus