EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSAMXG00000005439 (Gene tree)
Gene ID
103047214
Gene Symbol
aff3
Alias
id:ibd5053|si:dkey-19j7.2
Full Name
AF4/FMR2 family member 3
Gene Type
protein_coding
Species
Astyanax_mexicanus
Status
putative
Strand
Plus strand
Length
46827 bases
Position
chr19:21517285-21564111
Accession
103047214
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAMXP00000049951AF-4PF05110.134.9e-14111
ENSAMXP00000005572AF-4PF05110.131.5e-13811
ENSAMXP00000005573AF-4PF05110.135.2e-13011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAMXT00000038148-4764-ENSAMXP000000499511119 (aa)--
ENSAMXT00000005573-4197-ENSAMXP000000055731058 (aa)-W5KDB2
ENSAMXT00000005572-4631XM_007255576ENSAMXP000000055721097 (aa)XP_007255638W5KDB1
Gene Model
Click here to download ENSAMXG00000005439's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000005439's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAMXG00000005439aff35238.010ENSCGRG00001014566Aff35038.989Cricetulus_griseus_chok1gshd
ENSAMXG00000005439aff35238.010ENSCGRG00000003408Aff35038.989Cricetulus_griseus_crigri
ENSAMXG00000005439aff39945.335ENSCVAG00000019194aff38658.235Cyprinodon_variegatus
ENSAMXG00000005439aff39957.364ENSDARG00000079575aff39057.584Danio_rerio
ENSAMXG00000005439aff39562.551ENSELUG00000020087aff37558.050Esox_lucius
ENSAMXG00000005439aff38639.366ENSGAFG00000021231aff36150.137Gambusia_affinis
ENSAMXG00000005439aff39971.790ENSIPUG00000004129aff38871.134Ictalurus_punctatus
ENSAMXG00000005439aff35038.339ENSODEG00000007806AFF35738.977Octodon_degus
ENSAMXG00000005439aff36651.199ENSORLG00000022089aff35551.271Oryzias_latipes
ENSAMXG00000005439aff36651.878ENSOMEG00000011755aff36450.694Oryzias_melastigma
ENSAMXG00000005439aff37048.153ENSPKIG00000011220aff35954.004Paramormyrops_kingsleyae
ENSAMXG00000005439aff39944.991ENSPFOG00000015830aff36351.413Poecilia_formosa
ENSAMXG00000005439aff39945.552ENSPREG00000008458aff39458.614Poecilia_reticulata
ENSAMXG00000005439aff39980.511ENSPNAG00000001361aff39184.800Pygocentrus_nattereri
ENSAMXG00000005439aff37045.860ENSSFOG00015000615aff36751.231Scleropages_formosus
ENSAMXG00000005439aff39947.185ENSSLDG00000005399aff39845.185Seriola_lalandi_dorsalis
ENSAMXG00000005439aff39960.825ENSXMAG00000030063aff36759.325Xiphophorus_maculatus

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