EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000005525 (Gene tree)
Gene ID: -
Gene Symbol: fubp1
Alias: wu:fa92h11|wu:fb24h11|wu:fc26f06|zgc:66046
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 5703 bases
Position: chr16:3559196-3564898
Accession: 103037582
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000005663	KH_1	PF00013.29	1e-65	1	4
ENSAMXP00000005663	KH_1	PF00013.29	1e-65	2	4
ENSAMXP00000005663	KH_1	PF00013.29	1e-65	3	4
ENSAMXP00000005663	KH_1	PF00013.29	1e-65	4	4
ENSAMXP00000005663	KH_2	PF07650.17	2.6e-19	1	1
ENSAMXP00000005663	DUF1897	PF09005.10	1.9e-09	1	2
ENSAMXP00000005663	DUF1897	PF09005.10	1.9e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000005663	-	1596	XM_007243174	ENSAMXP00000005663	531 (aa)	XP_007243236	W5KDK2

Gene Model

Click here to download ENSAMXG00000005525's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000005525's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000005525	fubp1	58	30.818	ENSAMXG00000029202	-	59	30.818
ENSAMXG00000005525	fubp1	59	31.447	ENSAMXG00000032347	igf2bp2b	65	31.447
ENSAMXG00000005525	fubp1	98	56.038	ENSAMXG00000008318	fubp3	78	52.805
ENSAMXG00000005525	fubp1	65	30.201	ENSAMXG00000007453	igf2bp3	64	30.201
ENSAMXG00000005525	fubp1	56	43.636	ENSAMXG00000003440	pcbp3	57	43.636
ENSAMXG00000005525	fubp1	63	47.273	ENSAMXG00000037819	pcbp2	63	47.273
ENSAMXG00000005525	fubp1	99	55.950	ENSAMXG00000036582	khsrp	89	56.328

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000005525	fubp1	64	86.628	ENSG00000162613	FUBP1	88	77.799	Homo_sapiens
ENSAMXG00000005525	fubp1	100	84.387	ENSAPOG00000014845	fubp1	85	84.758	Acanthochromis_polyacanthus
ENSAMXG00000005525	fubp1	64	86.337	ENSAMEG00000007372	FUBP1	85	77.612	Ailuropoda_melanoleuca
ENSAMXG00000005525	fubp1	99	83.647	ENSACIG00000020024	fubp1	86	84.962	Amphilophus_citrinellus
ENSAMXG00000005525	fubp1	99	83.738	ENSAPEG00000012232	fubp1	86	81.495	Amphiprion_percula
ENSAMXG00000005525	fubp1	100	86.116	ENSATEG00000018619	fubp1	87	86.116	Anabas_testudineus
ENSAMXG00000005525	fubp1	64	86.628	ENSAPLG00000005965	FUBP1	90	76.679	Anas_platyrhynchos
ENSAMXG00000005525	fubp1	64	86.628	ENSACAG00000006310	FUBP1	79	71.583	Anolis_carolinensis
ENSAMXG00000005525	fubp1	100	84.270	ENSACLG00000006708	fubp1	87	84.296	Astatotilapia_calliptera
ENSAMXG00000005525	fubp1	64	86.337	ENSCJAG00000007062	FUBP1	87	77.612	Callithrix_jacchus
ENSAMXG00000005525	fubp1	64	86.337	ENSCAFG00000020361	FUBP1	88	77.612	Canis_familiaris
ENSAMXG00000005525	fubp1	64	86.337	ENSTSYG00000000148	FUBP1	94	77.425	Carlito_syrichta
ENSAMXG00000005525	fubp1	63	85.356	ENSCAPG00000011052	-	64	85.356	Cavia_aperea
ENSAMXG00000005525	fubp1	64	86.337	ENSCPOG00000002757	FUBP1	100	78.000	Cavia_porcellus
ENSAMXG00000005525	fubp1	64	66.949	ENSCCAG00000036537	FUBP1	86	66.949	Cebus_capucinus
ENSAMXG00000005525	fubp1	64	86.628	ENSCATG00000042126	FUBP1	88	77.799	Cercocebus_atys
ENSAMXG00000005525	fubp1	64	86.337	ENSCLAG00000005621	FUBP1	100	80.255	Chinchilla_lanigera
ENSAMXG00000005525	fubp1	64	86.628	ENSCSAG00000001402	FUBP1	88	77.799	Chlorocebus_sabaeus
ENSAMXG00000005525	fubp1	64	86.047	ENSCHOG00000008177	FUBP1	87	77.799	Choloepus_hoffmanni
ENSAMXG00000005525	fubp1	64	86.337	ENSCGRG00001007103	Fubp1	90	77.799	Cricetulus_griseus_chok1gshd
ENSAMXG00000005525	fubp1	64	86.337	ENSCGRG00000003372	Fubp1	100	77.333	Cricetulus_griseus_crigri
ENSAMXG00000005525	fubp1	99	85.876	ENSCSEG00000021412	fubp1	85	85.876	Cynoglossus_semilaevis
ENSAMXG00000005525	fubp1	99	84.270	ENSCVAG00000014487	fubp1	93	84.022	Cyprinodon_variegatus
ENSAMXG00000005525	fubp1	99	79.707	ENSDARG00000029248	fubp1	86	84.095	Danio_rerio
ENSAMXG00000005525	fubp1	79	58.025	ENSDNOG00000034565	-	71	58.786	Dasypus_novemcinctus
ENSAMXG00000005525	fubp1	64	86.337	ENSDORG00000016534	Fubp1	87	77.799	Dipodomys_ordii
ENSAMXG00000005525	fubp1	97	51.533	ENSEBUG00000016143	fubp1	77	48.276	Eptatretus_burgeri
ENSAMXG00000005525	fubp1	64	85.135	ENSEEUG00000001287	FUBP1	74	67.698	Erinaceus_europaeus
ENSAMXG00000005525	fubp1	99	83.764	ENSELUG00000007990	fubp1	87	84.871	Esox_lucius
ENSAMXG00000005525	fubp1	64	86.628	ENSFALG00000005768	FUBP1	83	76.536	Ficedula_albicollis
ENSAMXG00000005525	fubp1	64	86.047	ENSFDAG00000014210	FUBP1	100	78.912	Fukomys_damarensis
ENSAMXG00000005525	fubp1	99	83.708	ENSFHEG00000005230	fubp1	87	84.505	Fundulus_heteroclitus
ENSAMXG00000005525	fubp1	99	80.863	ENSGMOG00000003370	fubp1	88	80.863	Gadus_morhua
ENSAMXG00000005525	fubp1	64	86.667	ENSGALG00000008939	FUBP1	88	76.350	Gallus_gallus
ENSAMXG00000005525	fubp1	99	84.270	ENSGAFG00000020972	fubp1	85	85.045	Gambusia_affinis
ENSAMXG00000005525	fubp1	99	85.448	ENSGACG00000016563	fubp1	85	85.634	Gasterosteus_aculeatus
ENSAMXG00000005525	fubp1	100	82.523	ENSHBUG00000009835	fubp1	87	85.714	Haplochromis_burtoni
ENSAMXG00000005525	fubp1	64	86.337	ENSHGLG00000008415	-	100	80.255	Heterocephalus_glaber_female
ENSAMXG00000005525	fubp1	66	79.320	ENSHGLG00000002808	-	94	69.794	Heterocephalus_glaber_female
ENSAMXG00000005525	fubp1	66	80.453	ENSHGLG00100001414	-	94	70.732	Heterocephalus_glaber_male
ENSAMXG00000005525	fubp1	64	86.337	ENSHGLG00100003417	-	88	77.180	Heterocephalus_glaber_male
ENSAMXG00000005525	fubp1	99	83.302	ENSHCOG00000000910	fubp1	85	84.107	Hippocampus_comes
ENSAMXG00000005525	fubp1	99	88.951	ENSIPUG00000009896	fubp1	88	89.326	Ictalurus_punctatus
ENSAMXG00000005525	fubp1	64	86.337	ENSSTOG00000014312	FUBP1	88	77.612	Ictidomys_tridecemlineatus
ENSAMXG00000005525	fubp1	64	86.047	ENSJJAG00000020069	Fubp1	100	78.912	Jaculus_jaculus
ENSAMXG00000005525	fubp1	99	85.019	ENSKMAG00000018897	fubp1	87	85.393	Kryptolebias_marmoratus
ENSAMXG00000005525	fubp1	99	81.172	ENSLBEG00000012700	fubp1	83	84.369	Labrus_bergylta
ENSAMXG00000005525	fubp1	97	86.220	ENSLOCG00000003745	fubp1	83	84.324	Lepisosteus_oculatus
ENSAMXG00000005525	fubp1	64	86.337	ENSLAFG00000003273	FUBP1	98	76.471	Loxodonta_africana
ENSAMXG00000005525	fubp1	64	86.628	ENSMFAG00000031825	FUBP1	87	77.799	Macaca_fascicularis
ENSAMXG00000005525	fubp1	64	86.628	ENSMMUG00000002899	FUBP1	88	77.799	Macaca_mulatta
ENSAMXG00000005525	fubp1	64	86.628	ENSMNEG00000045212	FUBP1	88	77.799	Macaca_nemestrina
ENSAMXG00000005525	fubp1	100	82.703	ENSMAMG00000007489	fubp1	85	85.586	Mastacembelus_armatus
ENSAMXG00000005525	fubp1	99	85.902	ENSMZEG00005024298	fubp1	87	86.090	Maylandia_zebra
ENSAMXG00000005525	fubp1	64	86.087	ENSMGAG00000009424	FUBP1	90	75.978	Meleagris_gallopavo
ENSAMXG00000005525	fubp1	64	86.337	ENSMAUG00000016428	Fubp1	100	78.000	Mesocricetus_auratus
ENSAMXG00000005525	fubp1	64	86.337	ENSMOCG00000014751	Fubp1	100	77.333	Microtus_ochrogaster
ENSAMXG00000005525	fubp1	99	84.586	ENSMMOG00000019463	fubp1	98	84.586	Mola_mola
ENSAMXG00000005525	fubp1	64	74.931	ENSMODG00000020804	FUBP1	88	70.811	Monodelphis_domestica
ENSAMXG00000005525	fubp1	99	84.240	ENSMALG00000015173	fubp1	87	85.379	Monopterus_albus
ENSAMXG00000005525	fubp1	64	86.337	MGP_CAROLIEiJ_G0025740	Fubp1	100	77.333	Mus_caroli
ENSAMXG00000005525	fubp1	64	86.047	ENSMUSG00000028034	Fubp1	100	76.667	Mus_musculus
ENSAMXG00000005525	fubp1	64	86.337	MGP_PahariEiJ_G0027191	Fubp1	100	77.333	Mus_pahari
ENSAMXG00000005525	fubp1	64	86.337	MGP_SPRETEiJ_G0026693	Fubp1	100	77.333	Mus_spretus
ENSAMXG00000005525	fubp1	64	86.087	ENSMLUG00000014802	FUBP1	85	76.623	Myotis_lucifugus
ENSAMXG00000005525	fubp1	64	86.337	ENSNGAG00000014302	Fubp1	100	77.333	Nannospalax_galili
ENSAMXG00000005525	fubp1	99	84.181	ENSNBRG00000015099	fubp1	88	82.298	Neolamprologus_brichardi
ENSAMXG00000005525	fubp1	64	82.609	ENSNLEG00000009772	FUBP1	84	75.605	Nomascus_leucogenys
ENSAMXG00000005525	fubp1	63	66.864	ENSOPRG00000001175	FUBP1	87	61.381	Ochotona_princeps
ENSAMXG00000005525	fubp1	98	57.495	ENSODEG00000003657	-	85	56.167	Octodon_degus
ENSAMXG00000005525	fubp1	64	86.337	ENSODEG00000002600	-	100	78.912	Octodon_degus
ENSAMXG00000005525	fubp1	100	83.859	ENSONIG00000018381	fubp1	87	84.444	Oreochromis_niloticus
ENSAMXG00000005525	fubp1	64	86.628	ENSOANG00000009777	FUBP1	94	69.894	Ornithorhynchus_anatinus
ENSAMXG00000005525	fubp1	100	82.927	ENSORLG00000003540	fubp1	86	81.086	Oryzias_latipes
ENSAMXG00000005525	fubp1	100	83.114	ENSORLG00020005908	fubp1	88	81.801	Oryzias_latipes_hni
ENSAMXG00000005525	fubp1	100	83.677	ENSORLG00015008779	fubp1	88	83.865	Oryzias_latipes_hsok
ENSAMXG00000005525	fubp1	99	84.181	ENSOMEG00000021943	fubp1	87	84.369	Oryzias_melastigma
ENSAMXG00000005525	fubp1	64	85.838	ENSOGAG00000014233	FUBP1	85	77.037	Otolemur_garnettii
ENSAMXG00000005525	fubp1	64	86.337	ENSOARG00000013259	FUBP1	85	77.467	Ovis_aries
ENSAMXG00000005525	fubp1	64	86.337	ENSPPRG00000000413	FUBP1	88	77.612	Panthera_pardus
ENSAMXG00000005525	fubp1	64	86.337	ENSPTIG00000019450	FUBP1	88	77.612	Panthera_tigris_altaica
ENSAMXG00000005525	fubp1	64	86.337	ENSPSIG00000012965	FUBP1	92	76.866	Pelodiscus_sinensis
ENSAMXG00000005525	fubp1	99	84.730	ENSPMGG00000009060	fubp1	88	83.426	Periophthalmus_magnuspinnatus
ENSAMXG00000005525	fubp1	64	86.337	ENSPEMG00000021802	Fubp1	100	78.912	Peromyscus_maniculatus_bairdii
ENSAMXG00000005525	fubp1	52	65.217	ENSPMAG00000001644	-	57	65.217	Petromyzon_marinus
ENSAMXG00000005525	fubp1	99	81.802	ENSPFOG00000000238	fubp1	87	84.865	Poecilia_formosa
ENSAMXG00000005525	fubp1	99	84.557	ENSPLAG00000021170	fubp1	86	82.674	Poecilia_latipinna
ENSAMXG00000005525	fubp1	100	85.178	ENSPMEG00000004747	fubp1	87	85.338	Poecilia_mexicana
ENSAMXG00000005525	fubp1	99	85.122	ENSPREG00000017911	fubp1	99	85.687	Poecilia_reticulata
ENSAMXG00000005525	fubp1	66	85.634	ENSPPYG00000001219	-	53	86.842	Pongo_abelii
ENSAMXG00000005525	fubp1	64	86.337	ENSPCAG00000012617	FUBP1	86	78.409	Procavia_capensis
ENSAMXG00000005525	fubp1	64	86.337	ENSPCOG00000024974	FUBP1	88	77.612	Propithecus_coquereli
ENSAMXG00000005525	fubp1	64	78.198	ENSPVAG00000014637	FUBP1	87	72.388	Pteropus_vampyrus
ENSAMXG00000005525	fubp1	99	84.398	ENSPNYG00000004552	fubp1	87	85.533	Pundamilia_nyererei
ENSAMXG00000005525	fubp1	99	92.101	ENSPNAG00000016207	fubp1	86	92.101	Pygocentrus_nattereri
ENSAMXG00000005525	fubp1	64	86.337	ENSRNOG00000043370	Fubp1	85	77.180	Rattus_norvegicus
ENSAMXG00000005525	fubp1	64	86.628	ENSRBIG00000042950	FUBP1	88	77.799	Rhinopithecus_bieti
ENSAMXG00000005525	fubp1	64	86.628	ENSRROG00000043534	FUBP1	88	77.799	Rhinopithecus_roxellana
ENSAMXG00000005525	fubp1	64	86.337	ENSSBOG00000027299	FUBP1	97	77.256	Saimiri_boliviensis_boliviensis
ENSAMXG00000005525	fubp1	64	85.756	ENSSHAG00000005367	FUBP1	98	77.612	Sarcophilus_harrisii
ENSAMXG00000005525	fubp1	100	88.512	ENSSFOG00015010213	fubp1	86	88.743	Scleropages_formosus
ENSAMXG00000005525	fubp1	99	79.720	ENSSMAG00000012029	fubp1	85	83.217	Scophthalmus_maximus
ENSAMXG00000005525	fubp1	100	84.515	ENSSDUG00000007383	fubp1	84	85.586	Seriola_dumerili
ENSAMXG00000005525	fubp1	99	84.746	ENSSLDG00000022863	fubp1	84	85.586	Seriola_lalandi_dorsalis
ENSAMXG00000005525	fubp1	99	72.812	ENSSPUG00000008389	FUBP1	79	73.371	Sphenodon_punctatus
ENSAMXG00000005525	fubp1	100	86.492	ENSSPAG00000010161	fubp1	88	86.304	Stegastes_partitus
ENSAMXG00000005525	fubp1	64	85.143	ENSTGUG00000006841	FUBP1	90	75.830	Taeniopygia_guttata
ENSAMXG00000005525	fubp1	99	80.763	ENSTRUG00000004615	fubp1	88	78.856	Takifugu_rubripes
ENSAMXG00000005525	fubp1	58	88.148	ENSTNIG00000019815	-	85	88.148	Tetraodon_nigroviridis
ENSAMXG00000005525	fubp1	64	86.337	ENSTTRG00000000096	FUBP1	87	77.612	Tursiops_truncatus
ENSAMXG00000005525	fubp1	64	86.337	ENSVPAG00000004709	FUBP1	87	77.612	Vicugna_pacos
ENSAMXG00000005525	fubp1	99	83.019	ENSXCOG00000019354	fubp1	85	82.331	Xiphophorus_couchianus
ENSAMXG00000005525	fubp1	99	84.280	ENSXMAG00000007168	fubp1	98	85.417	Xiphophorus_maculatus