EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000005553 (Gene tree)
Gene ID: -
Gene Symbol: tra2a
Alias: zgc:64175
Full Name: transformer-2 protein homolog alpha
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 13890 bases
Position: chrAPWO02000050.1:2012428-2026317
Accession: 103027677
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000053416	RRM_1	PF00076.22	2.8e-19	1	1
ENSAMXP00000005692	RRM_1	PF00076.22	3.3e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000005692	-	747	-	ENSAMXP00000005692	248 (aa)	-	W5KDN1
ENSAMXT00000052248	-	693	XM_007240676	ENSAMXP00000053416	230 (aa)	XP_007240738	-

Gene Model

Click here to download ENSAMXG00000005553's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000005553's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000005553	tra2a	63	77.640	ENSAMXG00000003627	tra2b	59	75.568
ENSAMXG00000005553	tra2a	90	35.484	ENSAMXG00000040498	elavl3	78	30.000
ENSAMXG00000005553	tra2a	90	37.097	ENSAMXG00000000687	elavl4	66	31.765
ENSAMXG00000005553	tra2a	63	73.885	ENSAMXG00000039469	TRA2B	82	73.248
ENSAMXG00000005553	tra2a	52	37.097	ENSAMXG00000031223	elavl1a	78	31.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000005553	tra2a	100	76.190	ENSG00000164548	TRA2A	87	90.000	Homo_sapiens
ENSAMXG00000005553	tra2a	100	74.894	ENSAPOG00000017425	tra2a	74	84.177	Acanthochromis_polyacanthus
ENSAMXG00000005553	tra2a	69	88.304	ENSAMEG00000003501	TRA2A	52	88.953	Ailuropoda_melanoleuca
ENSAMXG00000005553	tra2a	94	82.063	ENSACIG00000001333	tra2a	81	86.709	Amphilophus_citrinellus
ENSAMXG00000005553	tra2a	100	74.468	ENSAOCG00000015445	tra2a	79	74.468	Amphiprion_ocellaris
ENSAMXG00000005553	tra2a	100	74.468	ENSAPEG00000018557	tra2a	77	84.810	Amphiprion_percula
ENSAMXG00000005553	tra2a	100	74.894	ENSATEG00000000671	tra2a	78	74.894	Anabas_testudineus
ENSAMXG00000005553	tra2a	98	80.972	ENSAPLG00000013689	TRA2A	62	87.283	Anas_platyrhynchos
ENSAMXG00000005553	tra2a	98	84.898	ENSACAG00000013502	TRA2A	76	72.609	Anolis_carolinensis
ENSAMXG00000005553	tra2a	85	68.246	ENSANAG00000035184	TRA2A	64	89.933	Aotus_nancymaae
ENSAMXG00000005553	tra2a	100	73.617	ENSACLG00000024845	tra2a	78	74.043	Astatotilapia_calliptera
ENSAMXG00000005553	tra2a	100	76.190	ENSBTAG00000012622	TRA2A	60	89.017	Bos_taurus
ENSAMXG00000005553	tra2a	100	74.459	ENSCJAG00000045802	-	64	87.861	Callithrix_jacchus
ENSAMXG00000005553	tra2a	100	76.190	ENSCJAG00000001509	-	60	89.595	Callithrix_jacchus
ENSAMXG00000005553	tra2a	100	76.190	ENSCAFG00000002788	TRA2A	60	89.017	Canis_familiaris
ENSAMXG00000005553	tra2a	69	88.304	ENSCAFG00020002745	TRA2A	63	89.017	Canis_lupus_dingo
ENSAMXG00000005553	tra2a	100	76.190	ENSTSYG00000000388	TRA2A	86	90.000	Carlito_syrichta
ENSAMXG00000005553	tra2a	98	71.951	ENSCAPG00000017377	TRA2A	59	72.254	Cavia_aperea
ENSAMXG00000005553	tra2a	100	76.190	ENSCPOG00000010739	TRA2A	60	89.595	Cavia_porcellus
ENSAMXG00000005553	tra2a	100	76.190	ENSCCAG00000019576	TRA2A	86	90.000	Cebus_capucinus
ENSAMXG00000005553	tra2a	100	76.190	ENSCATG00000041219	TRA2A	86	90.000	Cercocebus_atys
ENSAMXG00000005553	tra2a	98	82.591	ENSCLAG00000007917	TRA2A	60	89.595	Chinchilla_lanigera
ENSAMXG00000005553	tra2a	100	76.190	ENSCSAG00000014051	TRA2A	60	89.595	Chlorocebus_sabaeus
ENSAMXG00000005553	tra2a	100	75.758	ENSCHOG00000001130	TRA2A	60	89.595	Choloepus_hoffmanni
ENSAMXG00000005553	tra2a	100	75.536	ENSCPBG00000022466	TRA2A	77	70.815	Chrysemys_picta_bellii
ENSAMXG00000005553	tra2a	100	76.190	ENSCANG00000031292	TRA2A	87	90.000	Colobus_angolensis_palliatus
ENSAMXG00000005553	tra2a	98	86.420	ENSCGRG00001019980	Tra2a	61	90.751	Cricetulus_griseus_chok1gshd
ENSAMXG00000005553	tra2a	98	86.420	ENSCGRG00000006087	Tra2a	63	90.751	Cricetulus_griseus_crigri
ENSAMXG00000005553	tra2a	100	70.763	ENSCSEG00000012193	tra2a	63	90.476	Cynoglossus_semilaevis
ENSAMXG00000005553	tra2a	56	92.248	ENSDARG00000007863	tra2a	72	90.909	Danio_rerio
ENSAMXG00000005553	tra2a	100	70.996	ENSDNOG00000039446	TRA2A	60	89.595	Dasypus_novemcinctus
ENSAMXG00000005553	tra2a	98	85.597	ENSDORG00000009361	Tra2a	60	89.595	Dipodomys_ordii
ENSAMXG00000005553	tra2a	69	89.017	ENSETEG00000007250	TRA2A	61	89.714	Echinops_telfairi
ENSAMXG00000005553	tra2a	100	76.190	ENSEASG00005022002	TRA2A	60	89.017	Equus_asinus_asinus
ENSAMXG00000005553	tra2a	100	76.190	ENSECAG00000011508	TRA2A	60	89.017	Equus_caballus
ENSAMXG00000005553	tra2a	100	76.623	ENSEEUG00000015674	TRA2A	60	88.439	Erinaceus_europaeus
ENSAMXG00000005553	tra2a	100	79.747	ENSELUG00000005846	tra2a	72	72.996	Esox_lucius
ENSAMXG00000005553	tra2a	100	76.190	ENSFCAG00000005361	TRA2A	60	89.017	Felis_catus
ENSAMXG00000005553	tra2a	98	82.041	ENSFALG00000009605	TRA2A	62	87.283	Ficedula_albicollis
ENSAMXG00000005553	tra2a	98	84.082	ENSFDAG00000004949	TRA2A	60	90.173	Fukomys_damarensis
ENSAMXG00000005553	tra2a	100	75.000	ENSGMOG00000013740	tra2a	75	74.138	Gadus_morhua
ENSAMXG00000005553	tra2a	98	80.972	ENSGALG00000010973	TRA2A	78	70.815	Gallus_gallus
ENSAMXG00000005553	tra2a	100	76.923	ENSGACG00000006878	tra2a	80	72.532	Gasterosteus_aculeatus
ENSAMXG00000005553	tra2a	100	75.536	ENSGAGG00000005793	TRA2A	77	70.815	Gopherus_agassizii
ENSAMXG00000005553	tra2a	100	76.190	ENSGGOG00000009053	TRA2A	87	90.000	Gorilla_gorilla
ENSAMXG00000005553	tra2a	97	77.778	ENSHBUG00000018234	tra2a	78	74.468	Haplochromis_burtoni
ENSAMXG00000005553	tra2a	100	76.190	ENSHGLG00000012168	TRA2A	60	89.595	Heterocephalus_glaber_female
ENSAMXG00000005553	tra2a	100	76.190	ENSHGLG00100014577	TRA2A	60	89.595	Heterocephalus_glaber_male
ENSAMXG00000005553	tra2a	83	63.452	ENSHCOG00000006320	tra2a	96	60.000	Hippocampus_comes
ENSAMXG00000005553	tra2a	64	63.253	ENSHCOG00000006314	tra2a	82	63.190	Hippocampus_comes
ENSAMXG00000005553	tra2a	100	76.190	ENSSTOG00000012073	TRA2A	60	89.595	Ictidomys_tridecemlineatus
ENSAMXG00000005553	tra2a	98	85.597	ENSJJAG00000022787	Tra2a	62	89.595	Jaculus_jaculus
ENSAMXG00000005553	tra2a	97	73.563	ENSLBEG00000005297	tra2a	64	75.132	Labrus_bergylta
ENSAMXG00000005553	tra2a	100	72.727	ENSLACG00000014765	TRA2A	80	72.294	Latimeria_chalumnae
ENSAMXG00000005553	tra2a	99	57.676	ENSLOCG00000009558	-	58	81.287	Lepisosteus_oculatus
ENSAMXG00000005553	tra2a	100	81.466	ENSLOCG00000011615	-	80	75.862	Lepisosteus_oculatus
ENSAMXG00000005553	tra2a	98	81.224	ENSLAFG00000006598	TRA2A	60	90.173	Loxodonta_africana
ENSAMXG00000005553	tra2a	100	76.190	ENSMFAG00000043211	TRA2A	86	90.000	Macaca_fascicularis
ENSAMXG00000005553	tra2a	100	76.190	ENSMMUG00000006286	TRA2A	84	89.933	Macaca_mulatta
ENSAMXG00000005553	tra2a	100	76.190	ENSMNEG00000040670	TRA2A	86	90.000	Macaca_nemestrina
ENSAMXG00000005553	tra2a	100	76.190	ENSMLEG00000032154	TRA2A	87	90.000	Mandrillus_leucophaeus
ENSAMXG00000005553	tra2a	100	74.468	ENSMAMG00000008575	tra2a	90	74.468	Mastacembelus_armatus
ENSAMXG00000005553	tra2a	100	73.617	ENSMZEG00005009142	tra2a	78	74.043	Maylandia_zebra
ENSAMXG00000005553	tra2a	98	82.591	ENSMGAG00000010514	TRA2A	61	87.283	Meleagris_gallopavo
ENSAMXG00000005553	tra2a	100	76.623	ENSMICG00000043639	-	86	90.000	Microcebus_murinus
ENSAMXG00000005553	tra2a	99	66.802	ENSMICG00000036849	-	63	75.145	Microcebus_murinus
ENSAMXG00000005553	tra2a	70	82.286	ENSMOCG00000010249	-	64	82.659	Microtus_ochrogaster
ENSAMXG00000005553	tra2a	94	66.055	ENSMOCG00000006467	-	60	88.596	Microtus_ochrogaster
ENSAMXG00000005553	tra2a	98	81.377	ENSMMOG00000020174	tra2a	57	82.456	Mola_mola
ENSAMXG00000005553	tra2a	98	84.898	ENSMODG00000000807	TRA2A	60	89.595	Monodelphis_domestica
ENSAMXG00000005553	tra2a	100	78.298	ENSMALG00000020875	tra2a	77	72.340	Monopterus_albus
ENSAMXG00000005553	tra2a	98	86.420	ENSMUSG00000029817	Tra2a	61	90.751	Mus_musculus
ENSAMXG00000005553	tra2a	98	86.831	MGP_PahariEiJ_G0022115	Tra2a	61	90.751	Mus_pahari
ENSAMXG00000005553	tra2a	98	86.420	MGP_SPRETEiJ_G0029368	Tra2a	61	90.751	Mus_spretus
ENSAMXG00000005553	tra2a	98	83.673	ENSMPUG00000013480	TRA2A	60	89.017	Mustela_putorius_furo
ENSAMXG00000005553	tra2a	100	70.996	ENSMLUG00000013972	TRA2A	60	89.017	Myotis_lucifugus
ENSAMXG00000005553	tra2a	98	85.185	ENSNGAG00000023805	Tra2a	60	89.017	Nannospalax_galili
ENSAMXG00000005553	tra2a	63	87.742	ENSNBRG00000005992	tra2a	75	87.975	Neolamprologus_brichardi
ENSAMXG00000005553	tra2a	100	76.190	ENSNLEG00000014794	TRA2A	87	90.000	Nomascus_leucogenys
ENSAMXG00000005553	tra2a	64	68.944	ENSNLEG00000029659	-	92	68.944	Nomascus_leucogenys
ENSAMXG00000005553	tra2a	98	85.656	ENSMEUG00000001202	TRA2A	60	90.173	Notamacropus_eugenii
ENSAMXG00000005553	tra2a	98	82.449	ENSOPRG00000007606	TRA2A	60	88.439	Ochotona_princeps
ENSAMXG00000005553	tra2a	100	76.190	ENSODEG00000008335	TRA2A	60	89.595	Octodon_degus
ENSAMXG00000005553	tra2a	100	74.043	ENSONIG00000004503	tra2a	78	74.894	Oreochromis_niloticus
ENSAMXG00000005553	tra2a	98	82.591	ENSOANG00000014202	TRA2A	61	85.143	Ornithorhynchus_anatinus
ENSAMXG00000005553	tra2a	98	83.673	ENSOCUG00000024139	TRA2A	60	89.595	Oryctolagus_cuniculus
ENSAMXG00000005553	tra2a	94	69.787	ENSORLG00000022191	tra2a	62	73.563	Oryzias_latipes
ENSAMXG00000005553	tra2a	94	69.787	ENSORLG00020003490	tra2a	61	73.563	Oryzias_latipes_hni
ENSAMXG00000005553	tra2a	94	69.362	ENSORLG00015015485	tra2a	61	72.989	Oryzias_latipes_hsok
ENSAMXG00000005553	tra2a	94	70.259	ENSOMEG00000017864	tra2a	60	73.099	Oryzias_melastigma
ENSAMXG00000005553	tra2a	98	83.740	ENSOGAG00000009733	TRA2A	60	89.595	Otolemur_garnettii
ENSAMXG00000005553	tra2a	98	76.955	ENSOARG00000002323	-	65	89.595	Ovis_aries
ENSAMXG00000005553	tra2a	100	70.996	ENSOARG00000013147	TRA2A	60	89.017	Ovis_aries
ENSAMXG00000005553	tra2a	100	76.190	ENSPPAG00000034382	TRA2A	87	90.000	Pan_paniscus
ENSAMXG00000005553	tra2a	100	76.190	ENSPPRG00000015216	TRA2A	60	89.017	Panthera_pardus
ENSAMXG00000005553	tra2a	100	76.190	ENSPTIG00000021114	TRA2A	60	89.017	Panthera_tigris_altaica
ENSAMXG00000005553	tra2a	100	76.190	ENSPTRG00000046098	-	60	89.595	Pan_troglodytes
ENSAMXG00000005553	tra2a	99	84.337	ENSPTRG00000018988	TRA2A	86	90.000	Pan_troglodytes
ENSAMXG00000005553	tra2a	100	76.190	ENSPANG00000014541	TRA2A	60	89.595	Papio_anubis
ENSAMXG00000005553	tra2a	100	84.416	ENSPKIG00000012298	tra2a	79	76.190	Paramormyrops_kingsleyae
ENSAMXG00000005553	tra2a	98	84.490	ENSPSIG00000014993	TRA2A	61	89.017	Pelodiscus_sinensis
ENSAMXG00000005553	tra2a	98	86.008	ENSPEMG00000008564	-	60	90.173	Peromyscus_maniculatus_bairdii
ENSAMXG00000005553	tra2a	65	66.061	ENSPMAG00000007947	tra2a	57	65.854	Petromyzon_marinus
ENSAMXG00000005553	tra2a	98	84.898	ENSPCIG00000007917	TRA2A	60	90.173	Phascolarctos_cinereus
ENSAMXG00000005553	tra2a	100	76.190	ENSPPYG00000017728	TRA2A	60	89.595	Pongo_abelii
ENSAMXG00000005553	tra2a	98	84.898	ENSPCAG00000004148	TRA2A	61	90.173	Procavia_capensis
ENSAMXG00000005553	tra2a	83	72.539	ENSPCOG00000020465	TRA2A	72	66.321	Propithecus_coquereli
ENSAMXG00000005553	tra2a	100	76.190	ENSPVAG00000011298	TRA2A	60	89.595	Pteropus_vampyrus
ENSAMXG00000005553	tra2a	94	81.982	ENSPNYG00000020134	tra2a	77	89.873	Pundamilia_nyererei
ENSAMXG00000005553	tra2a	100	87.446	ENSPNAG00000000482	tra2a	79	80.519	Pygocentrus_nattereri
ENSAMXG00000005553	tra2a	98	86.420	ENSRNOG00000009156	Tra2a	61	90.751	Rattus_norvegicus
ENSAMXG00000005553	tra2a	52	95.312	ENSRBIG00000036805	TRA2A	65	96.032	Rhinopithecus_bieti
ENSAMXG00000005553	tra2a	100	76.190	ENSRROG00000030758	TRA2A	86	90.000	Rhinopithecus_roxellana
ENSAMXG00000005553	tra2a	100	76.190	ENSSBOG00000031562	TRA2A	86	90.000	Saimiri_boliviensis_boliviensis
ENSAMXG00000005553	tra2a	98	84.959	ENSSHAG00000005727	TRA2A	60	90.173	Sarcophilus_harrisii
ENSAMXG00000005553	tra2a	98	87.190	ENSSFOG00015014004	tra2a	79	77.489	Scleropages_formosus
ENSAMXG00000005553	tra2a	100	78.723	ENSSMAG00000014242	tra2a	80	72.340	Scophthalmus_maximus
ENSAMXG00000005553	tra2a	100	75.745	ENSSDUG00000005610	tra2a	77	75.319	Seriola_dumerili
ENSAMXG00000005553	tra2a	63	87.097	ENSSLDG00000025577	tra2a	82	87.342	Seriola_lalandi_dorsalis
ENSAMXG00000005553	tra2a	83	70.681	ENSSARG00000012900	TRA2A	62	64.398	Sorex_araneus
ENSAMXG00000005553	tra2a	100	75.536	ENSSPUG00000006143	TRA2A	60	90.751	Sphenodon_punctatus
ENSAMXG00000005553	tra2a	100	74.894	ENSSPAG00000004184	tra2a	78	74.894	Stegastes_partitus
ENSAMXG00000005553	tra2a	100	76.190	ENSSSCG00000015387	TRA2A	60	89.017	Sus_scrofa
ENSAMXG00000005553	tra2a	70	83.908	ENSTGUG00000002795	TRA2A	63	84.302	Taeniopygia_guttata
ENSAMXG00000005553	tra2a	99	78.166	ENSTBEG00000013773	TRA2A	75	72.052	Tupaia_belangeri
ENSAMXG00000005553	tra2a	98	83.265	ENSTTRG00000008922	TRA2A	60	88.439	Tursiops_truncatus
ENSAMXG00000005553	tra2a	63	90.385	ENSUMAG00000001181	TRA2A	81	90.625	Ursus_maritimus
ENSAMXG00000005553	tra2a	83	71.875	ENSVPAG00000001829	TRA2A	62	65.625	Vicugna_pacos
ENSAMXG00000005553	tra2a	100	76.190	ENSVVUG00000001045	TRA2A	60	89.017	Vulpes_vulpes
ENSAMXG00000005553	tra2a	69	85.311	ENSXETG00000007397	tra2a	62	86.034	Xenopus_tropicalis