EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000005582 (Gene tree)
Gene ID: 103043153
Gene Symbol: drosha
Alias: drosha|im:7150667|rnasen|zgc:158612
Full Name: drosha ribonuclease III
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 224991 bases
Position: chrAPWO02000118.1:1073519-1298509
Accession: 103043153
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000038453	Ribonuclease_3	PF00636.26	5.6e-43	1	2
ENSAMXP00000038453	Ribonuclease_3	PF00636.26	5.6e-43	2	2
ENSAMXP00000047012	Ribonuclease_3	PF00636.26	5.8e-43	1	2
ENSAMXP00000047012	Ribonuclease_3	PF00636.26	5.8e-43	2	2
ENSAMXP00000005732	Ribonuclease_3	PF00636.26	5.8e-43	1	2
ENSAMXP00000005732	Ribonuclease_3	PF00636.26	5.8e-43	2	2
ENSAMXP00000032939	Ribonuclease_3	PF00636.26	6.1e-43	1	2
ENSAMXP00000032939	Ribonuclease_3	PF00636.26	6.1e-43	2	2
ENSAMXP00000030752	Ribonuclease_3	PF00636.26	6.3e-43	1	2
ENSAMXP00000030752	Ribonuclease_3	PF00636.26	6.3e-43	2	2
ENSAMXP00000030131	Ribonuclease_3	PF00636.26	4.7e-34	1	2
ENSAMXP00000030131	Ribonuclease_3	PF00636.26	4.7e-34	2	2
ENSAMXP00000005732	dsrm	PF00035.26	1.4e-14	1	1
ENSAMXP00000047012	dsrm	PF00035.26	1.8e-14	1	1
ENSAMXP00000030131	dsrm	PF00035.26	1.9e-14	1	1
ENSAMXP00000032939	dsrm	PF00035.26	1.9e-14	1	1
ENSAMXP00000030752	dsrm	PF00035.26	1.9e-14	1	1
ENSAMXP00000038453	Ribonucleas_3_3	PF14622.6	8e-44	1	2
ENSAMXP00000038453	Ribonucleas_3_3	PF14622.6	8e-44	2	2
ENSAMXP00000047012	Ribonucleas_3_3	PF14622.6	8.5e-44	1	2
ENSAMXP00000047012	Ribonucleas_3_3	PF14622.6	8.5e-44	2	2
ENSAMXP00000032939	Ribonucleas_3_3	PF14622.6	8.9e-44	1	2
ENSAMXP00000032939	Ribonucleas_3_3	PF14622.6	8.9e-44	2	2
ENSAMXP00000030752	Ribonucleas_3_3	PF14622.6	9.2e-44	1	2
ENSAMXP00000030752	Ribonucleas_3_3	PF14622.6	9.2e-44	2	2
ENSAMXP00000005732	Ribonucleas_3_3	PF14622.6	9.6e-44	1	2
ENSAMXP00000005732	Ribonucleas_3_3	PF14622.6	9.6e-44	2	2
ENSAMXP00000030131	Ribonucleas_3_3	PF14622.6	7.2e-35	1	2
ENSAMXP00000030131	Ribonucleas_3_3	PF14622.6	7.2e-35	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000045874	-	4166	-	ENSAMXP00000030131	1264 (aa)	-	-
ENSAMXT00000005732	-	3930	XM_022666045	ENSAMXP00000005732	1309 (aa)	XP_022521766	W5KDS1
ENSAMXT00000054644	-	4226	-	ENSAMXP00000030752	1284 (aa)	-	-
ENSAMXT00000054767	-	4139	-	ENSAMXP00000047012	1255 (aa)	-	-
ENSAMXT00000031469	-	4181	-	ENSAMXP00000032939	1269 (aa)	-	-
ENSAMXT00000055486	-	6975	-	ENSAMXP00000038453	1229 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000005582's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000005582's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000005582	drosha	88	81.610	ENSG00000113360	DROSHA	99	77.429	Homo_sapiens
ENSAMXG00000005582	drosha	89	78.261	ENSAMEG00000006000	DROSHA	99	75.328	Ailuropoda_melanoleuca
ENSAMXG00000005582	drosha	73	93.348	ENSACIG00000019308	drosha	95	91.443	Amphilophus_citrinellus
ENSAMXG00000005582	drosha	100	81.126	ENSATEG00000021939	drosha	100	79.718	Anabas_testudineus
ENSAMXG00000005582	drosha	100	74.370	ENSAPLG00000004372	DROSHA	100	75.980	Anas_platyrhynchos
ENSAMXG00000005582	drosha	100	74.982	ENSACAG00000007970	DROSHA	99	74.189	Anolis_carolinensis
ENSAMXG00000005582	drosha	88	78.729	ENSANAG00000020506	DROSHA	94	87.410	Aotus_nancymaae
ENSAMXG00000005582	drosha	100	79.670	ENSACLG00000012227	drosha	100	79.735	Astatotilapia_calliptera
ENSAMXG00000005582	drosha	88	81.772	ENSBTAG00000017551	DROSHA	100	77.412	Bos_taurus
ENSAMXG00000005582	drosha	65	35.383	WBGene00009163	drsh-1	76	35.553	Caenorhabditis_elegans
ENSAMXG00000005582	drosha	87	82.586	ENSCJAG00000018881	DROSHA	97	77.354	Callithrix_jacchus
ENSAMXG00000005582	drosha	89	81.287	ENSCAFG00020017559	DROSHA	96	93.275	Canis_lupus_dingo
ENSAMXG00000005582	drosha	85	84.153	ENSCHIG00000022226	DROSHA	99	76.848	Capra_hircus
ENSAMXG00000005582	drosha	86	77.339	ENSCPOG00000015051	DROSHA	90	81.070	Cavia_porcellus
ENSAMXG00000005582	drosha	87	82.498	ENSCCAG00000027283	DROSHA	95	90.712	Cebus_capucinus
ENSAMXG00000005582	drosha	88	81.525	ENSCATG00000016833	DROSHA	95	89.474	Cercocebus_atys
ENSAMXG00000005582	drosha	89	81.234	ENSCLAG00000013048	DROSHA	100	77.313	Chinchilla_lanigera
ENSAMXG00000005582	drosha	88	81.525	ENSCSAG00000017202	DROSHA	96	77.354	Chlorocebus_sabaeus
ENSAMXG00000005582	drosha	56	99.351	ENSCHOG00000011786	DROSHA	63	82.051	Choloepus_hoffmanni
ENSAMXG00000005582	drosha	100	76.667	ENSCPBG00000000467	DROSHA	100	77.770	Chrysemys_picta_bellii
ENSAMXG00000005582	drosha	64	59.096	ENSCSAVG00000010638	-	98	59.951	Ciona_savignyi
ENSAMXG00000005582	drosha	88	81.756	ENSCANG00000035071	DROSHA	95	89.474	Colobus_angolensis_palliatus
ENSAMXG00000005582	drosha	100	74.638	ENSCGRG00001008885	Drosha	99	73.983	Cricetulus_griseus_chok1gshd
ENSAMXG00000005582	drosha	100	74.638	ENSCGRG00000006944	Drosha	99	73.983	Cricetulus_griseus_crigri
ENSAMXG00000005582	drosha	99	80.209	ENSCSEG00000001452	drosha	86	86.254	Cynoglossus_semilaevis
ENSAMXG00000005582	drosha	100	80.540	ENSCVAG00000004619	drosha	100	80.520	Cyprinodon_variegatus
ENSAMXG00000005582	drosha	100	82.324	ENSDARG00000055563	drosha	100	82.127	Danio_rerio
ENSAMXG00000005582	drosha	78	87.037	ENSDNOG00000001537	DROSHA	75	87.914	Dasypus_novemcinctus
ENSAMXG00000005582	drosha	88	80.220	ENSDORG00000005624	Drosha	86	82.804	Dipodomys_ordii
ENSAMXG00000005582	drosha	90	49.035	FBgn0026722	drosha	72	54.432	Drosophila_melanogaster
ENSAMXG00000005582	drosha	82	100.000	ENSETEG00000007814	DROSHA	74	100.000	Echinops_telfairi
ENSAMXG00000005582	drosha	52	82.154	ENSEBUG00000005974	-	98	80.804	Eptatretus_burgeri
ENSAMXG00000005582	drosha	89	81.287	ENSEASG00005007149	DROSHA	99	77.429	Equus_asinus_asinus
ENSAMXG00000005582	drosha	89	81.287	ENSECAG00000013578	DROSHA	97	77.504	Equus_caballus
ENSAMXG00000005582	drosha	78	82.846	ENSEEUG00000006351	DROSHA	74	83.821	Erinaceus_europaeus
ENSAMXG00000005582	drosha	99	75.692	ENSELUG00000015039	drosha	95	76.912	Esox_lucius
ENSAMXG00000005582	drosha	89	81.287	ENSFCAG00000000360	DROSHA	99	77.578	Felis_catus
ENSAMXG00000005582	drosha	100	74.454	ENSFALG00000012843	DROSHA	100	75.400	Ficedula_albicollis
ENSAMXG00000005582	drosha	89	81.150	ENSFDAG00000018414	DROSHA	99	77.313	Fukomys_damarensis
ENSAMXG00000005582	drosha	94	70.311	ENSFHEG00000003840	drosha	96	70.340	Fundulus_heteroclitus
ENSAMXG00000005582	drosha	100	76.741	ENSGALG00000012916	DROSHA	100	78.423	Gallus_gallus
ENSAMXG00000005582	drosha	100	79.984	ENSGAFG00000016853	drosha	99	79.729	Gambusia_affinis
ENSAMXG00000005582	drosha	100	76.984	ENSGAGG00000005621	DROSHA	100	77.844	Gopherus_agassizii
ENSAMXG00000005582	drosha	88	81.610	ENSGGOG00000011006	DROSHA	95	89.577	Gorilla_gorilla
ENSAMXG00000005582	drosha	100	76.592	ENSHBUG00000015907	drosha	99	77.082	Haplochromis_burtoni
ENSAMXG00000005582	drosha	88	81.702	ENSHGLG00000018873	DROSHA	85	83.218	Heterocephalus_glaber_female
ENSAMXG00000005582	drosha	88	81.702	ENSHGLG00100015793	DROSHA	84	83.218	Heterocephalus_glaber_male
ENSAMXG00000005582	drosha	86	83.003	ENSHCOG00000008454	drosha	97	83.520	Hippocampus_comes
ENSAMXG00000005582	drosha	100	81.961	ENSIPUG00000021202	drosha	100	81.264	Ictalurus_punctatus
ENSAMXG00000005582	drosha	74	87.090	ENSSTOG00000016323	DROSHA	100	93.530	Ictidomys_tridecemlineatus
ENSAMXG00000005582	drosha	89	78.706	ENSJJAG00000019758	Drosha	99	74.001	Jaculus_jaculus
ENSAMXG00000005582	drosha	100	77.303	ENSLBEG00000006606	drosha	100	78.176	Labrus_bergylta
ENSAMXG00000005582	drosha	100	78.175	ENSLACG00000005937	DROSHA	99	78.067	Latimeria_chalumnae
ENSAMXG00000005582	drosha	100	81.123	ENSLOCG00000012852	drosha	99	81.579	Lepisosteus_oculatus
ENSAMXG00000005582	drosha	90	76.966	ENSLAFG00000013831	DROSHA	96	80.134	Loxodonta_africana
ENSAMXG00000005582	drosha	88	81.525	ENSMFAG00000003055	DROSHA	99	75.637	Macaca_fascicularis
ENSAMXG00000005582	drosha	88	81.525	ENSMMUG00000012193	DROSHA	95	90.918	Macaca_mulatta
ENSAMXG00000005582	drosha	88	81.525	ENSMNEG00000037529	DROSHA	99	75.637	Macaca_nemestrina
ENSAMXG00000005582	drosha	88	76.166	ENSMLEG00000024167	DROSHA	99	72.625	Mandrillus_leucophaeus
ENSAMXG00000005582	drosha	100	80.851	ENSMAMG00000012613	drosha	98	90.825	Mastacembelus_armatus
ENSAMXG00000005582	drosha	100	79.670	ENSMZEG00005019487	drosha	100	79.735	Maylandia_zebra
ENSAMXG00000005582	drosha	96	88.671	ENSMGAG00000005087	DROSHA	100	78.497	Meleagris_gallopavo
ENSAMXG00000005582	drosha	100	74.266	ENSMAUG00000002863	Drosha	99	74.109	Mesocricetus_auratus
ENSAMXG00000005582	drosha	89	80.286	ENSMICG00000002241	DROSHA	95	87.347	Microcebus_murinus
ENSAMXG00000005582	drosha	88	78.701	ENSMOCG00000015044	Drosha	100	75.200	Microtus_ochrogaster
ENSAMXG00000005582	drosha	72	90.837	ENSMMOG00000004016	drosha	95	88.041	Mola_mola
ENSAMXG00000005582	drosha	100	75.429	ENSMODG00000004807	DROSHA	86	82.203	Monodelphis_domestica
ENSAMXG00000005582	drosha	100	81.294	ENSMALG00000010542	drosha	100	81.319	Monopterus_albus
ENSAMXG00000005582	drosha	88	77.896	MGP_CAROLIEiJ_G0019687	Drosha	95	90.506	Mus_caroli
ENSAMXG00000005582	drosha	88	79.211	ENSMUSG00000022191	Drosha	99	73.853	Mus_musculus
ENSAMXG00000005582	drosha	88	78.718	MGP_PahariEiJ_G0016063	Drosha	95	90.609	Mus_pahari
ENSAMXG00000005582	drosha	88	79.458	MGP_SPRETEiJ_G0020580	Drosha	95	90.712	Mus_spretus
ENSAMXG00000005582	drosha	89	78.654	ENSMPUG00000015237	DROSHA	99	75.273	Mustela_putorius_furo
ENSAMXG00000005582	drosha	89	77.250	ENSMLUG00000002581	DROSHA	99	73.256	Myotis_lucifugus
ENSAMXG00000005582	drosha	99	69.190	ENSNGAG00000017329	Drosha	99	69.360	Nannospalax_galili
ENSAMXG00000005582	drosha	78	73.375	ENSNBRG00000001870	drosha	99	71.526	Neolamprologus_brichardi
ENSAMXG00000005582	drosha	88	79.129	ENSNLEG00000013963	DROSHA	95	89.474	Nomascus_leucogenys
ENSAMXG00000005582	drosha	70	74.612	ENSMEUG00000002029	DROSHA	74	75.499	Notamacropus_eugenii
ENSAMXG00000005582	drosha	85	87.931	ENSOPRG00000010845	DROSHA	83	87.931	Ochotona_princeps
ENSAMXG00000005582	drosha	88	78.343	ENSODEG00000001911	DROSHA	99	74.001	Octodon_degus
ENSAMXG00000005582	drosha	100	77.940	ENSONIG00000006578	drosha	99	77.962	Oreochromis_niloticus
ENSAMXG00000005582	drosha	58	76.287	ENSOANG00000015744	-	100	75.933	Ornithorhynchus_anatinus
ENSAMXG00000005582	drosha	100	76.649	ENSOCUG00000000367	DROSHA	97	76.923	Oryctolagus_cuniculus
ENSAMXG00000005582	drosha	100	78.092	ENSORLG00000013592	drosha	100	78.433	Oryzias_latipes
ENSAMXG00000005582	drosha	75	91.207	ENSORLG00020002854	drosha	95	92.012	Oryzias_latipes_hni
ENSAMXG00000005582	drosha	73	92.299	ENSORLG00015003156	drosha	95	91.237	Oryzias_latipes_hsok
ENSAMXG00000005582	drosha	86	84.809	ENSOMEG00000001062	drosha	100	79.210	Oryzias_melastigma
ENSAMXG00000005582	drosha	89	76.702	ENSOGAG00000005424	DROSHA	96	78.943	Otolemur_garnettii
ENSAMXG00000005582	drosha	88	81.610	ENSPPAG00000037526	DROSHA	95	89.938	Pan_paniscus
ENSAMXG00000005582	drosha	89	81.287	ENSPPRG00000002687	DROSHA	99	77.578	Panthera_pardus
ENSAMXG00000005582	drosha	89	81.287	ENSPTIG00000017523	DROSHA	99	77.578	Panthera_tigris_altaica
ENSAMXG00000005582	drosha	88	81.610	ENSPTRG00000016762	DROSHA	99	77.429	Pan_troglodytes
ENSAMXG00000005582	drosha	88	81.525	ENSPANG00000003027	DROSHA	99	75.637	Papio_anubis
ENSAMXG00000005582	drosha	100	83.253	ENSPKIG00000011514	drosha	100	82.811	Paramormyrops_kingsleyae
ENSAMXG00000005582	drosha	100	74.819	ENSPEMG00000000607	Drosha	99	74.344	Peromyscus_maniculatus_bairdii
ENSAMXG00000005582	drosha	100	76.868	ENSPCIG00000006010	DROSHA	83	84.197	Phascolarctos_cinereus
ENSAMXG00000005582	drosha	100	80.968	ENSPREG00000022302	drosha	98	81.507	Poecilia_reticulata
ENSAMXG00000005582	drosha	88	78.636	ENSPPYG00000015370	DROSHA	99	75.127	Pongo_abelii
ENSAMXG00000005582	drosha	82	98.857	ENSPCAG00000007190	DROSHA	90	98.857	Procavia_capensis
ENSAMXG00000005582	drosha	88	78.051	ENSPCOG00000028511	DROSHA	94	86.791	Propithecus_coquereli
ENSAMXG00000005582	drosha	89	73.727	ENSPVAG00000013167	DROSHA	99	71.345	Pteropus_vampyrus
ENSAMXG00000005582	drosha	100	79.513	ENSPNYG00000000398	drosha	95	92.427	Pundamilia_nyererei
ENSAMXG00000005582	drosha	89	95.920	ENSPNAG00000011876	drosha	97	94.813	Pygocentrus_nattereri
ENSAMXG00000005582	drosha	98	73.626	ENSRNOG00000013451	Drosha	99	73.926	Rattus_norvegicus
ENSAMXG00000005582	drosha	87	81.371	ENSRBIG00000032786	DROSHA	94	88.533	Rhinopithecus_bieti
ENSAMXG00000005582	drosha	88	81.525	ENSRROG00000028199	DROSHA	98	77.354	Rhinopithecus_roxellana
ENSAMXG00000005582	drosha	87	82.498	ENSSBOG00000024008	DROSHA	95	89.061	Saimiri_boliviensis_boliviensis
ENSAMXG00000005582	drosha	100	75.351	ENSSHAG00000015198	DROSHA	95	89.102	Sarcophilus_harrisii
ENSAMXG00000005582	drosha	100	81.064	ENSSFOG00015009776	drosha	90	86.225	Scleropages_formosus
ENSAMXG00000005582	drosha	100	79.920	ENSSMAG00000008069	drosha	100	79.267	Scophthalmus_maximus
ENSAMXG00000005582	drosha	100	81.117	ENSSDUG00000010944	drosha	95	92.784	Seriola_dumerili
ENSAMXG00000005582	drosha	100	80.851	ENSSLDG00000025271	drosha	95	92.680	Seriola_lalandi_dorsalis
ENSAMXG00000005582	drosha	72	71.154	ENSSARG00000004436	-	68	70.192	Sorex_araneus
ENSAMXG00000005582	drosha	99	74.863	ENSSPUG00000006902	DROSHA	85	79.879	Sphenodon_punctatus
ENSAMXG00000005582	drosha	85	83.971	ENSSSCG00000016809	DROSHA	100	78.069	Sus_scrofa
ENSAMXG00000005582	drosha	100	73.536	ENSTGUG00000001955	DROSHA	100	74.257	Taeniopygia_guttata
ENSAMXG00000005582	drosha	99	79.250	ENSTRUG00000017778	drosha	98	80.144	Takifugu_rubripes
ENSAMXG00000005582	drosha	100	79.736	ENSTNIG00000008688	drosha	95	91.478	Tetraodon_nigroviridis
ENSAMXG00000005582	drosha	74	89.634	ENSTBEG00000000537	DROSHA	95	88.671	Tupaia_belangeri
ENSAMXG00000005582	drosha	100	73.875	ENSTTRG00000004210	DROSHA	99	73.542	Tursiops_truncatus
ENSAMXG00000005582	drosha	89	81.532	ENSUAMG00000025257	DROSHA	99	77.703	Ursus_americanus
ENSAMXG00000005582	drosha	88	82.214	ENSUMAG00000014097	DROSHA	95	93.129	Ursus_maritimus
ENSAMXG00000005582	drosha	78	81.481	ENSVPAG00000011260	DROSHA	99	77.828	Vicugna_pacos
ENSAMXG00000005582	drosha	89	81.287	ENSVVUG00000022212	DROSHA	99	93.003	Vulpes_vulpes
ENSAMXG00000005582	drosha	99	72.530	ENSXETG00000016701	drosha	99	72.033	Xenopus_tropicalis