EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000005652 (Gene tree)
Gene ID: 103046352
Gene Symbol: chd9
Alias: fb08b06|fb34c12|wu:fb08b06|wu:fb34c12
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 91700 bases
Position: chrAPWO02000032.1:2240618-2332317
Accession: 103046352
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000005810	ResIII	PF04851.15	2.4e-07	1	1
ENSAMXP00000043912	ResIII	PF04851.15	3.1e-07	1	1
ENSAMXP00000050522	ResIII	PF04851.15	3.2e-07	1	1
ENSAMXP00000043912	BRK	PF07533.16	7.9e-33	1	2
ENSAMXP00000043912	BRK	PF07533.16	7.9e-33	2	2
ENSAMXP00000050522	BRK	PF07533.16	8e-33	1	2
ENSAMXP00000050522	BRK	PF07533.16	8e-33	2	2
ENSAMXP00000005810	BRK	PF07533.16	1.2e-32	1	2
ENSAMXP00000005810	BRK	PF07533.16	1.2e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000005810	-	9725	XM_022667049	ENSAMXP00000005810	2952 (aa)	XP_022522770	W5KDZ9
ENSAMXT00000043226	-	8025	XM_022667057	ENSAMXP00000050522	2430 (aa)	XP_022522778	-
ENSAMXT00000045241	-	7939	XM_022667058	ENSAMXP00000043912	2420 (aa)	XP_022522779	-

Gene Model

Click here to download ENSAMXG00000005652's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000005652's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000005652	chd9	82	62.932	ENSAMXG00000009576	chd6	69	62.746
ENSAMXG00000005652	chd9	96	53.186	ENSAMXG00000006180	chd7	90	66.802

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000005652	chd9	99	68.727	ENSG00000177200	CHD9	98	70.877	Homo_sapiens
ENSAMXG00000005652	chd9	99	78.051	ENSAPOG00000023034	chd9	99	77.543	Acanthochromis_polyacanthus
ENSAMXG00000005652	chd9	68	75.164	ENSAMEG00000016232	CHD9	99	61.584	Ailuropoda_melanoleuca
ENSAMXG00000005652	chd9	98	74.085	ENSACIG00000004097	chd9	93	67.536	Amphilophus_citrinellus
ENSAMXG00000005652	chd9	99	77.694	ENSAOCG00000005487	chd9	99	77.196	Amphiprion_ocellaris
ENSAMXG00000005652	chd9	99	77.614	ENSAPEG00000009859	chd9	99	77.117	Amphiprion_percula
ENSAMXG00000005652	chd9	99	77.307	ENSATEG00000002748	chd9	93	71.524	Anabas_testudineus
ENSAMXG00000005652	chd9	99	69.328	ENSAPLG00000002826	CHD9	81	69.612	Anas_platyrhynchos
ENSAMXG00000005652	chd9	68	75.525	ENSACAG00000016150	CHD9	98	60.845	Anolis_carolinensis
ENSAMXG00000005652	chd9	68	74.611	ENSANAG00000015630	CHD9	98	70.175	Aotus_nancymaae
ENSAMXG00000005652	chd9	98	75.081	ENSACLG00000016899	chd9	99	69.467	Astatotilapia_calliptera
ENSAMXG00000005652	chd9	68	75.045	ENSBTAG00000002287	CHD9	95	63.137	Bos_taurus
ENSAMXG00000005652	chd9	98	68.359	ENSCJAG00000001573	CHD9	98	70.526	Callithrix_jacchus
ENSAMXG00000005652	chd9	68	75.343	ENSCAFG00000009699	CHD9	81	69.132	Canis_familiaris
ENSAMXG00000005652	chd9	68	75.343	ENSCAFG00020002879	CHD9	98	71.228	Canis_lupus_dingo
ENSAMXG00000005652	chd9	68	73.612	ENSCHIG00000021000	CHD9	70	66.032	Capra_hircus
ENSAMXG00000005652	chd9	68	74.910	ENSTSYG00000007693	CHD9	98	70.526	Carlito_syrichta
ENSAMXG00000005652	chd9	75	59.214	ENSCAPG00000011604	CHD9	59	61.250	Cavia_aperea
ENSAMXG00000005652	chd9	68	70.479	ENSCPOG00000036544	CHD9	96	59.920	Cavia_porcellus
ENSAMXG00000005652	chd9	68	74.611	ENSCCAG00000036178	CHD9	98	70.175	Cebus_capucinus
ENSAMXG00000005652	chd9	68	74.880	ENSCATG00000036753	CHD9	98	70.526	Cercocebus_atys
ENSAMXG00000005652	chd9	68	74.970	ENSCLAG00000007137	CHD9	99	76.802	Chinchilla_lanigera
ENSAMXG00000005652	chd9	68	74.820	ENSCSAG00000005311	CHD9	86	68.428	Chlorocebus_sabaeus
ENSAMXG00000005652	chd9	69	91.146	ENSCHOG00000003935	CHD9	65	91.099	Choloepus_hoffmanni
ENSAMXG00000005652	chd9	94	76.710	ENSCPBG00000012459	CHD9	85	79.614	Chrysemys_picta_bellii
ENSAMXG00000005652	chd9	68	74.820	ENSCANG00000030349	CHD9	98	70.526	Colobus_angolensis_palliatus
ENSAMXG00000005652	chd9	99	68.265	ENSCGRG00001016150	Chd9	94	61.549	Cricetulus_griseus_chok1gshd
ENSAMXG00000005652	chd9	99	68.265	ENSCGRG00000012850	Chd9	99	77.027	Cricetulus_griseus_crigri
ENSAMXG00000005652	chd9	99	74.576	ENSCSEG00000009209	chd9	99	73.747	Cynoglossus_semilaevis
ENSAMXG00000005652	chd9	98	76.528	ENSCVAG00000016195	chd9	99	66.875	Cyprinodon_variegatus
ENSAMXG00000005652	chd9	99	81.640	ENSDARG00000074498	chd9	99	82.375	Danio_rerio
ENSAMXG00000005652	chd9	66	75.926	ENSDNOG00000006045	CHD9	99	68.729	Dasypus_novemcinctus
ENSAMXG00000005652	chd9	52	77.427	ENSDORG00000008523	-	99	68.499	Dipodomys_ordii
ENSAMXG00000005652	chd9	61	92.857	ENSETEG00000009565	CHD9	86	92.742	Echinops_telfairi
ENSAMXG00000005652	chd9	95	72.940	ENSEASG00005014832	CHD9	99	76.956	Equus_asinus_asinus
ENSAMXG00000005652	chd9	68	75.738	ENSECAG00000011505	CHD9	99	61.392	Equus_caballus
ENSAMXG00000005652	chd9	81	86.784	ENSEEUG00000014515	CHD9	68	83.425	Erinaceus_europaeus
ENSAMXG00000005652	chd9	90	77.981	ENSELUG00000006031	chd9	99	76.401	Esox_lucius
ENSAMXG00000005652	chd9	68	75.463	ENSFCAG00000022534	CHD9	98	71.579	Felis_catus
ENSAMXG00000005652	chd9	99	69.309	ENSFALG00000013276	CHD9	99	68.167	Ficedula_albicollis
ENSAMXG00000005652	chd9	68	74.835	ENSFDAG00000021037	CHD9	86	68.169	Fukomys_damarensis
ENSAMXG00000005652	chd9	97	78.652	ENSFHEG00000006068	chd9	99	76.855	Fundulus_heteroclitus
ENSAMXG00000005652	chd9	81	83.255	ENSGMOG00000006040	chd9	80	83.232	Gadus_morhua
ENSAMXG00000005652	chd9	96	61.601	ENSGALG00000039178	CHD9	99	63.281	Gallus_gallus
ENSAMXG00000005652	chd9	99	76.607	ENSGAFG00000010014	chd9	99	76.529	Gambusia_affinis
ENSAMXG00000005652	chd9	68	74.821	ENSGGOG00000014816	CHD9	98	70.526	Gorilla_gorilla
ENSAMXG00000005652	chd9	99	75.239	ENSHBUG00000023322	chd9	99	75.807	Haplochromis_burtoni
ENSAMXG00000005652	chd9	99	68.135	ENSHGLG00000014938	CHD9	99	76.914	Heterocephalus_glaber_female
ENSAMXG00000005652	chd9	97	75.367	ENSHCOG00000000937	chd9	99	74.179	Hippocampus_comes
ENSAMXG00000005652	chd9	98	84.824	ENSIPUG00000016448	chd9	98	83.005	Ictalurus_punctatus
ENSAMXG00000005652	chd9	68	74.850	ENSSTOG00000022273	CHD9	99	77.027	Ictidomys_tridecemlineatus
ENSAMXG00000005652	chd9	52	77.760	ENSJJAG00000015741	-	99	68.315	Jaculus_jaculus
ENSAMXG00000005652	chd9	97	77.310	ENSKMAG00000016784	chd9	99	76.013	Kryptolebias_marmoratus
ENSAMXG00000005652	chd9	99	76.240	ENSLBEG00000012077	chd9	99	76.529	Labrus_bergylta
ENSAMXG00000005652	chd9	98	65.611	ENSLACG00000005557	CHD9	92	59.536	Latimeria_chalumnae
ENSAMXG00000005652	chd9	99	75.050	ENSLOCG00000007225	chd9	99	75.232	Lepisosteus_oculatus
ENSAMXG00000005652	chd9	68	74.598	ENSLAFG00000015374	CHD9	81	68.425	Loxodonta_africana
ENSAMXG00000005652	chd9	68	74.880	ENSMFAG00000041354	CHD9	98	70.526	Macaca_fascicularis
ENSAMXG00000005652	chd9	68	74.880	ENSMMUG00000016310	CHD9	98	70.526	Macaca_mulatta
ENSAMXG00000005652	chd9	68	74.880	ENSMNEG00000031494	CHD9	99	63.298	Macaca_nemestrina
ENSAMXG00000005652	chd9	68	74.880	ENSMLEG00000043219	CHD9	98	70.526	Mandrillus_leucophaeus
ENSAMXG00000005652	chd9	99	76.806	ENSMAMG00000003909	chd9	96	70.722	Mastacembelus_armatus
ENSAMXG00000005652	chd9	99	76.170	ENSMZEG00005006581	chd9	99	76.475	Maylandia_zebra
ENSAMXG00000005652	chd9	99	65.126	ENSMGAG00000004642	CHD9	72	61.498	Meleagris_gallopavo
ENSAMXG00000005652	chd9	68	75.030	ENSMICG00000016679	CHD9	98	71.579	Microcebus_murinus
ENSAMXG00000005652	chd9	98	75.993	ENSMMOG00000016406	chd9	97	70.025	Mola_mola
ENSAMXG00000005652	chd9	87	76.843	ENSMODG00000013142	-	99	77.551	Monodelphis_domestica
ENSAMXG00000005652	chd9	98	76.212	ENSMALG00000013306	chd9	99	69.244	Monopterus_albus
ENSAMXG00000005652	chd9	69	73.576	MGP_CAROLIEiJ_G0031364	Chd9	90	62.951	Mus_caroli
ENSAMXG00000005652	chd9	99	59.473	ENSMUSG00000056608	Chd9	99	76.345	Mus_musculus
ENSAMXG00000005652	chd9	95	74.209	MGP_PahariEiJ_G0022964	Chd9	81	67.238	Mus_pahari
ENSAMXG00000005652	chd9	69	73.282	MGP_SPRETEiJ_G0032483	Chd9	90	62.606	Mus_spretus
ENSAMXG00000005652	chd9	68	75.343	ENSMPUG00000003285	CHD9	94	61.592	Mustela_putorius_furo
ENSAMXG00000005652	chd9	68	74.821	ENSMLUG00000004456	CHD9	86	67.783	Myotis_lucifugus
ENSAMXG00000005652	chd9	99	76.806	ENSNBRG00000009423	chd9	99	77.098	Neolamprologus_brichardi
ENSAMXG00000005652	chd9	68	74.940	ENSNLEG00000001026	CHD9	99	63.348	Nomascus_leucogenys
ENSAMXG00000005652	chd9	74	96.241	ENSMEUG00000008222	-	69	91.083	Notamacropus_eugenii
ENSAMXG00000005652	chd9	56	96.241	ENSOPRG00000011168	CHD9	72	87.006	Ochotona_princeps
ENSAMXG00000005652	chd9	68	74.866	ENSODEG00000004466	CHD9	99	61.346	Octodon_degus
ENSAMXG00000005652	chd9	98	77.369	ENSONIG00000002816	chd9	98	77.778	Oreochromis_niloticus
ENSAMXG00000005652	chd9	68	76.545	ENSOANG00000013401	CHD9	90	66.744	Ornithorhynchus_anatinus
ENSAMXG00000005652	chd9	69	74.368	ENSOCUG00000001016	CHD9	98	67.312	Oryctolagus_cuniculus
ENSAMXG00000005652	chd9	97	77.276	ENSORLG00000013810	chd9	98	74.950	Oryzias_latipes
ENSAMXG00000005652	chd9	97	75.535	ENSORLG00020020665	chd9	93	68.345	Oryzias_latipes_hni
ENSAMXG00000005652	chd9	97	77.231	ENSORLG00015019126	chd9	96	76.559	Oryzias_latipes_hsok
ENSAMXG00000005652	chd9	61	83.551	ENSOMEG00000015978	chd9	99	70.313	Oryzias_melastigma
ENSAMXG00000005652	chd9	99	68.656	ENSOGAG00000002110	CHD9	86	68.295	Otolemur_garnettii
ENSAMXG00000005652	chd9	68	74.970	ENSOARG00000017664	CHD9	95	63.177	Ovis_aries
ENSAMXG00000005652	chd9	68	74.250	ENSPPAG00000039388	-	98	68.464	Pan_paniscus
ENSAMXG00000005652	chd9	68	75.403	ENSPPRG00000004801	CHD9	98	71.228	Panthera_pardus
ENSAMXG00000005652	chd9	68	73.851	ENSPTIG00000021854	CHD9	98	61.754	Panthera_tigris_altaica
ENSAMXG00000005652	chd9	68	74.760	ENSPTRG00000008113	CHD9	98	70.526	Pan_troglodytes
ENSAMXG00000005652	chd9	69	74.161	ENSPANG00000019307	CHD9	98	70.526	Papio_anubis
ENSAMXG00000005652	chd9	96	77.530	ENSPKIG00000021876	chd9	99	76.717	Paramormyrops_kingsleyae
ENSAMXG00000005652	chd9	96	70.992	ENSPKIG00000025401	-	96	63.026	Paramormyrops_kingsleyae
ENSAMXG00000005652	chd9	56	77.786	ENSPSIG00000008099	CHD9	98	65.068	Pelodiscus_sinensis
ENSAMXG00000005652	chd9	87	71.128	ENSPCIG00000017215	CHD9	99	69.515	Phascolarctos_cinereus
ENSAMXG00000005652	chd9	97	78.189	ENSPFOG00000015839	chd9	93	70.787	Poecilia_formosa
ENSAMXG00000005652	chd9	97	78.519	ENSPLAG00000011118	chd9	99	76.410	Poecilia_latipinna
ENSAMXG00000005652	chd9	97	76.949	ENSPMEG00000015106	chd9	83	75.030	Poecilia_mexicana
ENSAMXG00000005652	chd9	97	78.484	ENSPREG00000006473	chd9	99	76.806	Poecilia_reticulata
ENSAMXG00000005652	chd9	68	74.820	ENSPPYG00000007348	CHD9	99	61.577	Pongo_abelii
ENSAMXG00000005652	chd9	73	79.545	ENSPCAG00000007564	CHD9	73	80.907	Procavia_capensis
ENSAMXG00000005652	chd9	68	72.814	ENSPCOG00000028433	CHD9	98	70.526	Propithecus_coquereli
ENSAMXG00000005652	chd9	96	57.729	ENSPVAG00000015617	CHD9	78	73.798	Pteropus_vampyrus
ENSAMXG00000005652	chd9	99	76.279	ENSPNYG00000010947	chd9	99	76.569	Pundamilia_nyererei
ENSAMXG00000005652	chd9	98	91.368	ENSPNAG00000024141	chd9	98	91.284	Pygocentrus_nattereri
ENSAMXG00000005652	chd9	68	71.711	ENSRNOG00000049302	Chd9	98	55.087	Rattus_norvegicus
ENSAMXG00000005652	chd9	68	74.820	ENSRBIG00000035553	CHD9	98	70.526	Rhinopithecus_bieti
ENSAMXG00000005652	chd9	67	75.531	ENSRROG00000033278	CHD9	98	70.526	Rhinopithecus_roxellana
ENSAMXG00000005652	chd9	68	74.671	ENSSBOG00000030240	CHD9	98	70.526	Saimiri_boliviensis_boliviensis
ENSAMXG00000005652	chd9	99	68.851	ENSSHAG00000002719	CHD9	86	68.516	Sarcophilus_harrisii
ENSAMXG00000005652	chd9	97	77.551	ENSSFOG00015020209	chd9	99	76.311	Scleropages_formosus
ENSAMXG00000005652	chd9	99	72.852	ENSSFOG00015001327	chd9	99	72.195	Scleropages_formosus
ENSAMXG00000005652	chd9	97	78.506	ENSSMAG00000008953	chd9	99	76.351	Scophthalmus_maximus
ENSAMXG00000005652	chd9	99	77.298	ENSSDUG00000006139	chd9	99	77.551	Seriola_dumerili
ENSAMXG00000005652	chd9	99	76.786	ENSSLDG00000017818	chd9	99	77.036	Seriola_lalandi_dorsalis
ENSAMXG00000005652	chd9	72	77.638	ENSSARG00000010632	CHD9	52	77.722	Sorex_araneus
ENSAMXG00000005652	chd9	99	77.361	ENSSPAG00000021649	chd9	99	77.264	Stegastes_partitus
ENSAMXG00000005652	chd9	68	74.376	ENSSSCG00000033591	CHD9	61	74.954	Sus_scrofa
ENSAMXG00000005652	chd9	88	72.265	ENSTGUG00000007476	CHD9	99	64.388	Taeniopygia_guttata
ENSAMXG00000005652	chd9	99	74.889	ENSTRUG00000009125	chd9	94	68.499	Takifugu_rubripes
ENSAMXG00000005652	chd9	69	83.486	ENSTNIG00000003825	chd9	87	83.486	Tetraodon_nigroviridis
ENSAMXG00000005652	chd9	62	94.915	ENSTBEG00000016052	-	63	94.737	Tupaia_belangeri
ENSAMXG00000005652	chd9	84	75.135	ENSTTRG00000012674	CHD9	85	64.003	Tursiops_truncatus
ENSAMXG00000005652	chd9	78	87.049	ENSUMAG00000004043	CHD9	95	86.837	Ursus_maritimus
ENSAMXG00000005652	chd9	72	75.475	ENSVPAG00000001374	CHD9	92	66.921	Vicugna_pacos
ENSAMXG00000005652	chd9	68	75.284	ENSVVUG00000019435	CHD9	81	69.091	Vulpes_vulpes
ENSAMXG00000005652	chd9	98	66.789	ENSXETG00000000349	chd9	96	64.041	Xenopus_tropicalis
ENSAMXG00000005652	chd9	97	78.148	ENSXCOG00000012997	chd9	99	75.989	Xiphophorus_couchianus
ENSAMXG00000005652	chd9	97	78.470	ENSXMAG00000016192	chd9	99	77.217	Xiphophorus_maculatus