EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000005755 (Gene tree)
Gene ID: 103032606
Gene Symbol: wdr3
Alias: sb:cb42|wu:fb92b07
Full Name: WD repeat domain 3
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 25403 bases
Position: chr19:22206637-22232039
Accession: 103032606
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000043946	Utp12	PF04003.12	4e-19	1	1
ENSAMXP00000032384	Utp12	PF04003.12	4.5e-19	1	1
ENSAMXP00000005911	Utp12	PF04003.12	4.5e-19	1	1
ENSAMXP00000042518	Utp12	PF04003.12	4.5e-19	1	1
ENSAMXP00000050792	Utp12	PF04003.12	2.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000050407	-	4000	-	ENSAMXP00000032384	923 (aa)	-	-
ENSAMXT00000055773	-	3841	-	ENSAMXP00000043946	870 (aa)	-	-
ENSAMXT00000005911	-	4051	XM_022680455	ENSAMXP00000005911	940 (aa)	XP_022536176	W5KEA0
ENSAMXT00000039867	-	4341	-	ENSAMXP00000042518	940 (aa)	-	UPI000BBDDBC9
ENSAMXT00000036918	-	2706	-	ENSAMXP00000050792	901 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000005755's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000005755's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000005755	wdr3	60	31.395	ENSAMXG00000007741	-	91	37.662
ENSAMXG00000005755	wdr3	53	30.252	ENSAMXG00000006756	prpf4	54	30.252
ENSAMXG00000005755	wdr3	60	32.479	ENSAMXG00000031828	wdr5	99	36.364
ENSAMXG00000005755	wdr3	56	31.034	ENSAMXG00000042589	tbl3	52	31.034

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000005755	wdr3	100	70.930	ENSG00000065183	WDR3	100	70.930	Homo_sapiens
ENSAMXG00000005755	wdr3	95	81.369	ENSAPOG00000005975	wdr3	99	81.706	Acanthochromis_polyacanthus
ENSAMXG00000005755	wdr3	100	70.085	ENSAMEG00000004339	WDR3	100	70.085	Ailuropoda_melanoleuca
ENSAMXG00000005755	wdr3	99	75.597	ENSACIG00000006993	wdr3	99	75.271	Amphilophus_citrinellus
ENSAMXG00000005755	wdr3	99	82.101	ENSAOCG00000023966	wdr3	99	81.706	Amphiprion_ocellaris
ENSAMXG00000005755	wdr3	99	81.828	ENSAPEG00000018223	wdr3	99	82.147	Amphiprion_percula
ENSAMXG00000005755	wdr3	99	81.828	ENSATEG00000000703	wdr3	99	81.934	Anabas_testudineus
ENSAMXG00000005755	wdr3	100	66.139	ENSACAG00000008210	WDR3	98	65.269	Anolis_carolinensis
ENSAMXG00000005755	wdr3	100	70.719	ENSANAG00000033348	WDR3	100	70.719	Aotus_nancymaae
ENSAMXG00000005755	wdr3	99	82.465	ENSACLG00000016975	wdr3	99	82.040	Astatotilapia_calliptera
ENSAMXG00000005755	wdr3	100	70.190	ENSBTAG00000019937	WDR3	100	70.190	Bos_taurus
ENSAMXG00000005755	wdr3	99	35.307	WBGene00017435	F13H8.2	97	35.536	Caenorhabditis_elegans
ENSAMXG00000005755	wdr3	100	70.296	ENSCJAG00000005749	WDR3	100	70.296	Callithrix_jacchus
ENSAMXG00000005755	wdr3	100	70.190	ENSCAFG00000009916	WDR3	100	70.190	Canis_familiaris
ENSAMXG00000005755	wdr3	94	71.803	ENSCAFG00020020610	WDR3	98	71.803	Canis_lupus_dingo
ENSAMXG00000005755	wdr3	100	70.190	ENSCHIG00000010490	WDR3	100	70.190	Capra_hircus
ENSAMXG00000005755	wdr3	100	69.726	ENSTSYG00000002158	WDR3	100	69.093	Carlito_syrichta
ENSAMXG00000005755	wdr3	100	61.268	ENSCAPG00000015805	WDR3	100	61.268	Cavia_aperea
ENSAMXG00000005755	wdr3	100	70.190	ENSCPOG00000011305	WDR3	100	70.190	Cavia_porcellus
ENSAMXG00000005755	wdr3	100	70.370	ENSCCAG00000037237	WDR3	100	70.370	Cebus_capucinus
ENSAMXG00000005755	wdr3	100	70.930	ENSCATG00000037200	WDR3	100	70.930	Cercocebus_atys
ENSAMXG00000005755	wdr3	100	69.979	ENSCLAG00000010657	WDR3	100	69.979	Chinchilla_lanigera
ENSAMXG00000005755	wdr3	100	70.930	ENSCSAG00000001705	WDR3	100	70.930	Chlorocebus_sabaeus
ENSAMXG00000005755	wdr3	84	70.000	ENSCHOG00000006428	WDR3	88	70.000	Choloepus_hoffmanni
ENSAMXG00000005755	wdr3	98	71.166	ENSCPBG00000001426	WDR3	98	71.166	Chrysemys_picta_bellii
ENSAMXG00000005755	wdr3	100	69.418	ENSCGRG00001019544	Wdr3	100	69.418	Cricetulus_griseus_chok1gshd
ENSAMXG00000005755	wdr3	100	67.045	ENSCGRG00000001027	Wdr3	100	67.045	Cricetulus_griseus_crigri
ENSAMXG00000005755	wdr3	99	80.553	ENSCSEG00000009381	wdr3	99	80.128	Cynoglossus_semilaevis
ENSAMXG00000005755	wdr3	99	77.790	ENSCVAG00000014846	wdr3	99	77.790	Cyprinodon_variegatus
ENSAMXG00000005755	wdr3	100	86.702	ENSDARG00000011079	wdr3	100	86.702	Danio_rerio
ENSAMXG00000005755	wdr3	100	69.556	ENSDNOG00000018114	WDR3	100	69.556	Dasypus_novemcinctus
ENSAMXG00000005755	wdr3	100	68.973	ENSDORG00000011031	Wdr3	100	69.078	Dipodomys_ordii
ENSAMXG00000005755	wdr3	98	42.454	FBgn0038597	CG8064	98	42.100	Drosophila_melanogaster
ENSAMXG00000005755	wdr3	100	70.190	ENSEASG00005006393	WDR3	100	70.190	Equus_asinus_asinus
ENSAMXG00000005755	wdr3	100	70.296	ENSECAG00000006575	WDR3	99	70.296	Equus_caballus
ENSAMXG00000005755	wdr3	95	69.877	ENSEEUG00000002218	WDR3	100	69.317	Erinaceus_europaeus
ENSAMXG00000005755	wdr3	100	81.847	ENSELUG00000005997	wdr3	100	81.847	Esox_lucius
ENSAMXG00000005755	wdr3	100	70.190	ENSFCAG00000003469	WDR3	100	70.190	Felis_catus
ENSAMXG00000005755	wdr3	98	67.606	ENSFALG00000005089	WDR3	98	68.143	Ficedula_albicollis
ENSAMXG00000005755	wdr3	100	70.613	ENSFDAG00000016284	WDR3	100	70.613	Fukomys_damarensis
ENSAMXG00000005755	wdr3	99	80.679	ENSFHEG00000012138	wdr3	99	77.851	Fundulus_heteroclitus
ENSAMXG00000005755	wdr3	95	72.626	ENSGMOG00000002962	wdr3	100	72.626	Gadus_morhua
ENSAMXG00000005755	wdr3	98	70.162	ENSGALG00000014791	WDR3	99	70.064	Gallus_gallus
ENSAMXG00000005755	wdr3	99	80.488	ENSGAFG00000013102	wdr3	99	80.064	Gambusia_affinis
ENSAMXG00000005755	wdr3	94	68.877	ENSGACG00000008251	wdr3	69	72.059	Gasterosteus_aculeatus
ENSAMXG00000005755	wdr3	95	71.300	ENSGAGG00000009171	WDR3	96	70.470	Gopherus_agassizii
ENSAMXG00000005755	wdr3	100	71.036	ENSGGOG00000009982	WDR3	100	71.036	Gorilla_gorilla
ENSAMXG00000005755	wdr3	99	82.572	ENSHBUG00000004367	wdr3	99	82.147	Haplochromis_burtoni
ENSAMXG00000005755	wdr3	100	69.979	ENSHGLG00000017936	WDR3	100	69.979	Heterocephalus_glaber_female
ENSAMXG00000005755	wdr3	100	69.979	ENSHGLG00100008292	WDR3	100	69.979	Heterocephalus_glaber_male
ENSAMXG00000005755	wdr3	100	71.875	ENSHCOG00000017501	wdr3	98	78.671	Hippocampus_comes
ENSAMXG00000005755	wdr3	100	87.885	ENSIPUG00000003396	wdr3	100	87.885	Ictalurus_punctatus
ENSAMXG00000005755	wdr3	100	70.211	ENSSTOG00000003504	WDR3	100	70.211	Ictidomys_tridecemlineatus
ENSAMXG00000005755	wdr3	100	69.483	ENSJJAG00000013861	Wdr3	100	69.483	Jaculus_jaculus
ENSAMXG00000005755	wdr3	99	80.529	ENSKMAG00000016004	wdr3	99	82.254	Kryptolebias_marmoratus
ENSAMXG00000005755	wdr3	99	78.190	ENSLBEG00000013757	wdr3	99	78.299	Labrus_bergylta
ENSAMXG00000005755	wdr3	98	66.165	ENSLACG00000014259	WDR3	99	66.351	Latimeria_chalumnae
ENSAMXG00000005755	wdr3	99	76.890	ENSLOCG00000011052	wdr3	99	76.997	Lepisosteus_oculatus
ENSAMXG00000005755	wdr3	100	70.085	ENSLAFG00000012108	WDR3	100	70.085	Loxodonta_africana
ENSAMXG00000005755	wdr3	100	70.930	ENSMFAG00000034570	WDR3	100	70.930	Macaca_fascicularis
ENSAMXG00000005755	wdr3	100	70.825	ENSMMUG00000008513	WDR3	100	70.825	Macaca_mulatta
ENSAMXG00000005755	wdr3	100	70.930	ENSMNEG00000039555	WDR3	100	70.930	Macaca_nemestrina
ENSAMXG00000005755	wdr3	100	70.719	ENSMLEG00000035516	WDR3	100	70.719	Mandrillus_leucophaeus
ENSAMXG00000005755	wdr3	99	78.930	ENSMAMG00000020737	wdr3	99	78.930	Mastacembelus_armatus
ENSAMXG00000005755	wdr3	99	77.943	ENSMZEG00005019253	wdr3	99	77.731	Maylandia_zebra
ENSAMXG00000005755	wdr3	93	71.128	ENSMGAG00000014241	WDR3	99	68.428	Meleagris_gallopavo
ENSAMXG00000005755	wdr3	100	69.630	ENSMAUG00000002574	Wdr3	100	69.630	Mesocricetus_auratus
ENSAMXG00000005755	wdr3	100	69.652	ENSMICG00000001783	WDR3	100	69.652	Microcebus_murinus
ENSAMXG00000005755	wdr3	100	70.507	ENSMOCG00000014361	Wdr3	100	69.524	Microtus_ochrogaster
ENSAMXG00000005755	wdr3	99	76.452	ENSMMOG00000019419	wdr3	99	76.452	Mola_mola
ENSAMXG00000005755	wdr3	99	70.053	ENSMODG00000005243	WDR3	100	69.979	Monodelphis_domestica
ENSAMXG00000005755	wdr3	99	74.477	ENSMALG00000016265	wdr3	99	74.587	Monopterus_albus
ENSAMXG00000005755	wdr3	100	69.027	MGP_CAROLIEiJ_G0025421	Wdr3	100	69.767	Mus_caroli
ENSAMXG00000005755	wdr3	100	68.922	ENSMUSG00000033285	Wdr3	100	69.556	Mus_musculus
ENSAMXG00000005755	wdr3	100	69.312	MGP_PahariEiJ_G0026865	Wdr3	100	69.312	Mus_pahari
ENSAMXG00000005755	wdr3	100	68.710	MGP_SPRETEiJ_G0026371	Wdr3	100	69.345	Mus_spretus
ENSAMXG00000005755	wdr3	100	70.159	ENSMPUG00000001565	WDR3	100	70.159	Mustela_putorius_furo
ENSAMXG00000005755	wdr3	100	70.507	ENSMLUG00000003500	WDR3	100	70.507	Myotis_lucifugus
ENSAMXG00000005755	wdr3	100	70.233	ENSNGAG00000021117	Wdr3	100	70.233	Nannospalax_galili
ENSAMXG00000005755	wdr3	99	73.830	ENSNBRG00000015140	wdr3	99	73.723	Neolamprologus_brichardi
ENSAMXG00000005755	wdr3	100	70.719	ENSNLEG00000005304	WDR3	100	70.719	Nomascus_leucogenys
ENSAMXG00000005755	wdr3	100	82.759	ENSMEUG00000009673	WDR3	81	82.759	Notamacropus_eugenii
ENSAMXG00000005755	wdr3	97	68.932	ENSOPRG00000001857	WDR3	94	68.932	Ochotona_princeps
ENSAMXG00000005755	wdr3	93	70.434	ENSODEG00000000136	WDR3	100	70.434	Octodon_degus
ENSAMXG00000005755	wdr3	99	82.253	ENSONIG00000015678	wdr3	99	81.828	Oreochromis_niloticus
ENSAMXG00000005755	wdr3	100	67.903	ENSOANG00000003070	WDR3	100	68.153	Ornithorhynchus_anatinus
ENSAMXG00000005755	wdr3	100	70.507	ENSOCUG00000007572	WDR3	100	70.507	Oryctolagus_cuniculus
ENSAMXG00000005755	wdr3	99	79.490	ENSORLG00020022391	wdr3	99	79.702	Oryzias_latipes_hni
ENSAMXG00000005755	wdr3	99	79.384	ENSORLG00015023208	wdr3	99	79.596	Oryzias_latipes_hsok
ENSAMXG00000005755	wdr3	99	80.021	ENSOMEG00000017592	wdr3	99	79.596	Oryzias_melastigma
ENSAMXG00000005755	wdr3	100	69.873	ENSOGAG00000007399	WDR3	100	69.133	Otolemur_garnettii
ENSAMXG00000005755	wdr3	100	69.968	ENSOARG00000020325	WDR3	100	69.968	Ovis_aries
ENSAMXG00000005755	wdr3	100	71.036	ENSPPAG00000029068	WDR3	100	71.036	Pan_paniscus
ENSAMXG00000005755	wdr3	100	69.767	ENSPPRG00000022972	WDR3	100	69.767	Panthera_pardus
ENSAMXG00000005755	wdr3	100	69.767	ENSPTIG00000016747	WDR3	100	69.767	Panthera_tigris_altaica
ENSAMXG00000005755	wdr3	100	71.036	ENSPTRG00000001168	WDR3	100	71.036	Pan_troglodytes
ENSAMXG00000005755	wdr3	100	70.930	ENSPANG00000020680	WDR3	100	70.930	Papio_anubis
ENSAMXG00000005755	wdr3	99	83.280	ENSPKIG00000024900	wdr3	99	83.280	Paramormyrops_kingsleyae
ENSAMXG00000005755	wdr3	98	71.398	ENSPSIG00000017455	WDR3	99	71.338	Pelodiscus_sinensis
ENSAMXG00000005755	wdr3	98	78.467	ENSPMGG00000022686	wdr3	99	78.016	Periophthalmus_magnuspinnatus
ENSAMXG00000005755	wdr3	100	69.735	ENSPEMG00000011928	Wdr3	100	69.735	Peromyscus_maniculatus_bairdii
ENSAMXG00000005755	wdr3	95	69.765	ENSPCIG00000000938	WDR3	99	69.765	Phascolarctos_cinereus
ENSAMXG00000005755	wdr3	99	80.806	ENSPFOG00000017900	wdr3	99	80.700	Poecilia_formosa
ENSAMXG00000005755	wdr3	99	81.018	ENSPLAG00000014362	wdr3	99	80.912	Poecilia_latipinna
ENSAMXG00000005755	wdr3	100	70.899	ENSPPYG00000000970	WDR3	100	70.899	Pongo_abelii
ENSAMXG00000005755	wdr3	91	59.524	ENSPCAG00000001265	WDR3	99	58.598	Procavia_capensis
ENSAMXG00000005755	wdr3	99	77.365	ENSPNYG00000006217	wdr3	99	76.727	Pundamilia_nyererei
ENSAMXG00000005755	wdr3	100	89.255	ENSPNAG00000006843	wdr3	100	89.255	Pygocentrus_nattereri
ENSAMXG00000005755	wdr3	100	69.133	ENSRNOG00000019670	Wdr3	100	69.767	Rattus_norvegicus
ENSAMXG00000005755	wdr3	99	70.319	ENSRBIG00000039149	WDR3	98	69.860	Rhinopithecus_bieti
ENSAMXG00000005755	wdr3	100	70.930	ENSRROG00000028066	WDR3	100	70.930	Rhinopithecus_roxellana
ENSAMXG00000005755	wdr3	99	36.939	YLR129W	DIP2	98	37.006	Saccharomyces_cerevisiae
ENSAMXG00000005755	wdr3	100	70.719	ENSSBOG00000015569	WDR3	100	70.719	Saimiri_boliviensis_boliviensis
ENSAMXG00000005755	wdr3	100	69.093	ENSSHAG00000005169	WDR3	100	69.093	Sarcophilus_harrisii
ENSAMXG00000005755	wdr3	99	81.150	ENSSFOG00015000595	wdr3	99	81.150	Scleropages_formosus
ENSAMXG00000005755	wdr3	99	80.826	ENSSMAG00000008334	wdr3	99	80.508	Scophthalmus_maximus
ENSAMXG00000005755	wdr3	99	82.040	ENSSDUG00000014276	wdr3	99	82.147	Seriola_dumerili
ENSAMXG00000005755	wdr3	99	81.383	ENSSLDG00000012837	wdr3	99	81.383	Seriola_lalandi_dorsalis
ENSAMXG00000005755	wdr3	96	64.679	ENSSARG00000002347	WDR3	100	64.117	Sorex_araneus
ENSAMXG00000005755	wdr3	98	67.040	ENSSPUG00000005582	WDR3	98	66.741	Sphenodon_punctatus
ENSAMXG00000005755	wdr3	100	70.190	ENSSSCG00000006727	WDR3	100	70.190	Sus_scrofa
ENSAMXG00000005755	wdr3	98	67.497	ENSTGUG00000013357	WDR3	98	68.575	Taeniopygia_guttata
ENSAMXG00000005755	wdr3	99	78.556	ENSTRUG00000002727	wdr3	99	78.579	Takifugu_rubripes
ENSAMXG00000005755	wdr3	99	76.521	ENSTNIG00000005299	wdr3	98	76.458	Tetraodon_nigroviridis
ENSAMXG00000005755	wdr3	88	75.000	ENSTBEG00000002549	WDR3	66	75.299	Tupaia_belangeri
ENSAMXG00000005755	wdr3	97	74.586	ENSTTRG00000003817	WDR3	94	74.586	Tursiops_truncatus
ENSAMXG00000005755	wdr3	100	69.282	ENSUAMG00000023139	WDR3	100	69.282	Ursus_americanus
ENSAMXG00000005755	wdr3	90	70.262	ENSVPAG00000000073	WDR3	89	70.262	Vicugna_pacos
ENSAMXG00000005755	wdr3	100	70.190	ENSVVUG00000010629	WDR3	100	70.190	Vulpes_vulpes
ENSAMXG00000005755	wdr3	98	68.939	ENSXETG00000009920	wdr3	98	68.393	Xenopus_tropicalis
ENSAMXG00000005755	wdr3	99	80.806	ENSXMAG00000009827	wdr3	99	80.382	Xiphophorus_maculatus