EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000005845 (Gene tree)
Gene ID: 103032164
Gene Symbol: nhp2
Alias: nola2|wu:fb36b10|wu:fd61a03|zgc:73227
Full Name: NHP2 ribonucleoprotein
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 1916 bases
Position: chr14:6599041-6600956
Accession: 103032164
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000005986	Ribosomal_L7Ae	PF01248.26	3.2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000005986	-	456	XM_007254122	ENSAMXP00000005986	151 (aa)	XP_007254184	W5KEH5

Gene Model

Click here to download ENSAMXG00000005845's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000005845's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000005845	nhp2	62	41.935	ENSAMXG00000037464	-	73	41.935
ENSAMXG00000005845	nhp2	62	41.489	ENSAMXG00000042994	SNU13	73	41.489

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000005845	nhp2	100	74.510	ENSG00000145912	NHP2	100	74.510	Homo_sapiens
ENSAMXG00000005845	nhp2	100	81.699	ENSAPOG00000004742	nhp2	100	81.699	Acanthochromis_polyacanthus
ENSAMXG00000005845	nhp2	100	74.510	ENSAMEG00000006471	NHP2	100	74.510	Ailuropoda_melanoleuca
ENSAMXG00000005845	nhp2	100	79.114	ENSACIG00000007968	nhp2	100	82.278	Amphilophus_citrinellus
ENSAMXG00000005845	nhp2	100	80.392	ENSAOCG00000016311	nhp2	100	81.699	Amphiprion_ocellaris
ENSAMXG00000005845	nhp2	100	80.392	ENSAPEG00000008765	nhp2	100	81.699	Amphiprion_percula
ENSAMXG00000005845	nhp2	100	80.645	ENSATEG00000009651	nhp2	100	81.290	Anabas_testudineus
ENSAMXG00000005845	nhp2	87	78.788	ENSACAG00000006692	NHP2	95	73.793	Anolis_carolinensis
ENSAMXG00000005845	nhp2	100	73.856	ENSANAG00000023290	NHP2	100	73.856	Aotus_nancymaae
ENSAMXG00000005845	nhp2	85	68.217	ENSANAG00000031552	-	99	68.217	Aotus_nancymaae
ENSAMXG00000005845	nhp2	100	81.169	ENSACLG00000001082	nhp2	100	81.818	Astatotilapia_calliptera
ENSAMXG00000005845	nhp2	100	74.510	ENSBTAG00000006374	NHP2	100	74.510	Bos_taurus
ENSAMXG00000005845	nhp2	83	50.394	WBGene00012964	Y48A6B.3	78	50.394	Caenorhabditis_elegans
ENSAMXG00000005845	nhp2	100	73.203	ENSCJAG00000038564	-	100	73.203	Callithrix_jacchus
ENSAMXG00000005845	nhp2	98	72.667	ENSCJAG00000023093	-	98	72.667	Callithrix_jacchus
ENSAMXG00000005845	nhp2	100	74.510	ENSCAFG00000000240	NHP2	100	74.510	Canis_familiaris
ENSAMXG00000005845	nhp2	78	66.667	ENSCAFG00020003649	-	57	66.667	Canis_lupus_dingo
ENSAMXG00000005845	nhp2	100	74.510	ENSCHIG00000015159	NHP2	100	74.510	Capra_hircus
ENSAMXG00000005845	nhp2	100	59.477	ENSTSYG00000008150	NHP2	100	59.477	Carlito_syrichta
ENSAMXG00000005845	nhp2	100	73.856	ENSCPOG00000033753	NHP2	100	73.856	Cavia_porcellus
ENSAMXG00000005845	nhp2	100	73.856	ENSCCAG00000034815	NHP2	100	73.856	Cebus_capucinus
ENSAMXG00000005845	nhp2	100	60.927	ENSCCAG00000034664	-	100	60.927	Cebus_capucinus
ENSAMXG00000005845	nhp2	98	66.216	ENSCCAG00000027964	-	98	66.216	Cebus_capucinus
ENSAMXG00000005845	nhp2	100	74.510	ENSCATG00000043608	NHP2	100	74.510	Cercocebus_atys
ENSAMXG00000005845	nhp2	100	72.549	ENSCLAG00000016005	NHP2	100	72.549	Chinchilla_lanigera
ENSAMXG00000005845	nhp2	100	74.510	ENSCSAG00000008690	NHP2	100	74.510	Chlorocebus_sabaeus
ENSAMXG00000005845	nhp2	100	73.856	ENSCHOG00000013038	NHP2	100	73.856	Choloepus_hoffmanni
ENSAMXG00000005845	nhp2	87	80.303	ENSCPBG00000022106	NHP2	100	74.834	Chrysemys_picta_bellii
ENSAMXG00000005845	nhp2	98	54.362	ENSCSAVG00000008036	-	98	54.362	Ciona_savignyi
ENSAMXG00000005845	nhp2	95	69.655	ENSCANG00000038441	-	92	74.615	Colobus_angolensis_palliatus
ENSAMXG00000005845	nhp2	100	74.510	ENSCANG00000031562	NHP2	100	74.510	Colobus_angolensis_palliatus
ENSAMXG00000005845	nhp2	100	72.549	ENSCGRG00001005326	Nhp2	100	72.549	Cricetulus_griseus_chok1gshd
ENSAMXG00000005845	nhp2	100	72.549	ENSCGRG00000013680	Nhp2	100	72.549	Cricetulus_griseus_crigri
ENSAMXG00000005845	nhp2	100	81.290	ENSCSEG00000006761	nhp2	100	81.290	Cynoglossus_semilaevis
ENSAMXG00000005845	nhp2	100	88.079	ENSDARG00000069422	nhp2	100	88.079	Danio_rerio
ENSAMXG00000005845	nhp2	100	73.856	ENSDNOG00000017150	NHP2	94	73.856	Dasypus_novemcinctus
ENSAMXG00000005845	nhp2	100	75.163	ENSDORG00000003312	Nhp2	100	75.163	Dipodomys_ordii
ENSAMXG00000005845	nhp2	100	45.625	FBgn0029148	NHP2	100	45.625	Drosophila_melanogaster
ENSAMXG00000005845	nhp2	100	72.078	ENSETEG00000006774	NHP2	100	72.078	Echinops_telfairi
ENSAMXG00000005845	nhp2	100	74.510	ENSEASG00005012569	NHP2	100	74.510	Equus_asinus_asinus
ENSAMXG00000005845	nhp2	96	74.150	ENSECAG00000022963	NHP2	84	74.150	Equus_caballus
ENSAMXG00000005845	nhp2	66	95.000	ENSELUG00000021981	nhp2	85	95.000	Esox_lucius
ENSAMXG00000005845	nhp2	100	74.510	ENSFCAG00000015541	NHP2	100	74.510	Felis_catus
ENSAMXG00000005845	nhp2	87	78.626	ENSFALG00000008774	NHP2	91	74.658	Ficedula_albicollis
ENSAMXG00000005845	nhp2	100	69.935	ENSFDAG00000008131	NHP2	100	69.935	Fukomys_damarensis
ENSAMXG00000005845	nhp2	100	81.410	ENSFHEG00000000431	nhp2	100	81.410	Fundulus_heteroclitus
ENSAMXG00000005845	nhp2	88	89.474	ENSGMOG00000000278	nhp2	100	84.106	Gadus_morhua
ENSAMXG00000005845	nhp2	91	71.739	ENSGALG00000033666	NHP2	82	71.631	Gallus_gallus
ENSAMXG00000005845	nhp2	100	80.128	ENSGAFG00000009838	nhp2	100	80.128	Gambusia_affinis
ENSAMXG00000005845	nhp2	89	81.481	ENSGACG00000020889	nhp2	100	77.124	Gasterosteus_aculeatus
ENSAMXG00000005845	nhp2	75	71.304	ENSGAGG00000006901	NHP2	92	71.304	Gopherus_agassizii
ENSAMXG00000005845	nhp2	100	66.225	ENSGGOG00000027198	-	100	66.225	Gorilla_gorilla
ENSAMXG00000005845	nhp2	100	66.225	ENSGGOG00000040409	-	100	66.225	Gorilla_gorilla
ENSAMXG00000005845	nhp2	100	81.169	ENSHBUG00000010207	nhp2	100	82.468	Haplochromis_burtoni
ENSAMXG00000005845	nhp2	100	73.856	ENSHGLG00000013630	NHP2	100	73.856	Heterocephalus_glaber_female
ENSAMXG00000005845	nhp2	100	64.238	ENSHGLG00000014450	-	100	64.238	Heterocephalus_glaber_female
ENSAMXG00000005845	nhp2	100	73.856	ENSHGLG00100007298	NHP2	100	73.856	Heterocephalus_glaber_male
ENSAMXG00000005845	nhp2	100	64.238	ENSHGLG00100005282	-	100	64.238	Heterocephalus_glaber_male
ENSAMXG00000005845	nhp2	100	64.238	ENSHGLG00100003440	-	100	64.238	Heterocephalus_glaber_male
ENSAMXG00000005845	nhp2	100	73.418	ENSHCOG00000019552	nhp2	100	73.418	Hippocampus_comes
ENSAMXG00000005845	nhp2	100	90.728	ENSIPUG00000024197	NHP2	100	90.728	Ictalurus_punctatus
ENSAMXG00000005845	nhp2	100	74.510	ENSSTOG00000003235	NHP2	100	74.510	Ictidomys_tridecemlineatus
ENSAMXG00000005845	nhp2	100	73.684	ENSJJAG00000016469	Nhp2	100	74.342	Jaculus_jaculus
ENSAMXG00000005845	nhp2	100	80.645	ENSLBEG00000002128	nhp2	100	80.645	Labrus_bergylta
ENSAMXG00000005845	nhp2	100	81.169	ENSLACG00000017167	NHP2	99	81.169	Latimeria_chalumnae
ENSAMXG00000005845	nhp2	91	84.672	ENSLOCG00000009630	nhp2	100	83.444	Lepisosteus_oculatus
ENSAMXG00000005845	nhp2	100	74.510	ENSLAFG00000012828	NHP2	100	74.510	Loxodonta_africana
ENSAMXG00000005845	nhp2	100	74.510	ENSMFAG00000032376	NHP2	100	74.510	Macaca_fascicularis
ENSAMXG00000005845	nhp2	100	55.921	ENSMMUG00000046673	-	100	55.921	Macaca_mulatta
ENSAMXG00000005845	nhp2	100	74.510	ENSMNEG00000038787	NHP2	100	74.510	Macaca_nemestrina
ENSAMXG00000005845	nhp2	100	74.510	ENSMLEG00000028639	NHP2	100	74.510	Mandrillus_leucophaeus
ENSAMXG00000005845	nhp2	100	81.935	ENSMAMG00000022425	nhp2	100	81.935	Mastacembelus_armatus
ENSAMXG00000005845	nhp2	100	81.169	ENSMZEG00005027834	nhp2	100	81.818	Maylandia_zebra
ENSAMXG00000005845	nhp2	66	82.000	ENSMGAG00000003917	NHP2	100	82.000	Meleagris_gallopavo
ENSAMXG00000005845	nhp2	100	74.510	ENSMICG00000005379	NHP2	100	74.510	Microcebus_murinus
ENSAMXG00000005845	nhp2	100	72.549	ENSMOCG00000022171	Nhp2	100	72.549	Microtus_ochrogaster
ENSAMXG00000005845	nhp2	89	82.963	ENSMMOG00000016811	nhp2	100	80.000	Mola_mola
ENSAMXG00000005845	nhp2	100	69.481	ENSMODG00000004231	NHP2	100	69.481	Monodelphis_domestica
ENSAMXG00000005845	nhp2	100	81.290	ENSMALG00000009613	nhp2	100	81.290	Monopterus_albus
ENSAMXG00000005845	nhp2	100	71.895	MGP_CAROLIEiJ_G0016312	Nhp2	100	71.895	Mus_caroli
ENSAMXG00000005845	nhp2	100	71.242	ENSMUSG00000001056	Nhp2	100	71.242	Mus_musculus
ENSAMXG00000005845	nhp2	100	71.242	MGP_PahariEiJ_G0017447	Nhp2	100	71.242	Mus_pahari
ENSAMXG00000005845	nhp2	100	71.242	MGP_SPRETEiJ_G0017156	Nhp2	100	71.242	Mus_spretus
ENSAMXG00000005845	nhp2	100	73.548	ENSMPUG00000000747	NHP2	100	73.548	Mustela_putorius_furo
ENSAMXG00000005845	nhp2	100	73.203	ENSMLUG00000003377	NHP2	100	73.203	Myotis_lucifugus
ENSAMXG00000005845	nhp2	100	75.000	ENSNGAG00000021818	Nhp2	100	75.000	Nannospalax_galili
ENSAMXG00000005845	nhp2	100	81.818	ENSNBRG00000018016	nhp2	100	83.117	Neolamprologus_brichardi
ENSAMXG00000005845	nhp2	100	66.879	ENSNLEG00000015765	NHP2	100	66.879	Nomascus_leucogenys
ENSAMXG00000005845	nhp2	100	69.481	ENSMEUG00000003839	NHP2	100	69.481	Notamacropus_eugenii
ENSAMXG00000005845	nhp2	100	58.170	ENSOPRG00000007907	NHP2	100	58.170	Ochotona_princeps
ENSAMXG00000005845	nhp2	100	73.203	ENSODEG00000006948	NHP2	100	73.203	Octodon_degus
ENSAMXG00000005845	nhp2	100	82.468	ENSONIG00000017865	nhp2	100	83.766	Oreochromis_niloticus
ENSAMXG00000005845	nhp2	50	80.000	ENSOANG00000001204	-	100	80.000	Ornithorhynchus_anatinus
ENSAMXG00000005845	nhp2	99	74.342	ENSOCUG00000016057	-	99	74.342	Oryctolagus_cuniculus
ENSAMXG00000005845	nhp2	99	74.342	ENSOCUG00000016091	-	99	74.342	Oryctolagus_cuniculus
ENSAMXG00000005845	nhp2	100	83.444	ENSORLG00000029195	nhp2	100	83.444	Oryzias_latipes
ENSAMXG00000005845	nhp2	100	83.444	ENSORLG00020003277	nhp2	100	83.444	Oryzias_latipes_hni
ENSAMXG00000005845	nhp2	100	83.444	ENSORLG00015007851	nhp2	100	83.444	Oryzias_latipes_hsok
ENSAMXG00000005845	nhp2	98	81.757	ENSOMEG00000017381	nhp2	87	81.757	Oryzias_melastigma
ENSAMXG00000005845	nhp2	100	74.839	ENSOGAG00000016108	NHP2	100	74.839	Otolemur_garnettii
ENSAMXG00000005845	nhp2	100	68.627	ENSOARG00000006274	NHP2	100	68.627	Ovis_aries
ENSAMXG00000005845	nhp2	100	65.563	ENSPPAG00000038834	-	100	65.563	Pan_paniscus
ENSAMXG00000005845	nhp2	100	74.510	ENSPPAG00000028668	NHP2	100	74.510	Pan_paniscus
ENSAMXG00000005845	nhp2	100	74.510	ENSPPRG00000022505	NHP2	100	74.510	Panthera_pardus
ENSAMXG00000005845	nhp2	62	85.106	ENSPTIG00000021731	NHP2	81	84.314	Panthera_tigris_altaica
ENSAMXG00000005845	nhp2	100	74.510	ENSPTRG00000048185	NHP2	100	74.510	Pan_troglodytes
ENSAMXG00000005845	nhp2	93	65.248	ENSPTRG00000049011	-	98	65.248	Pan_troglodytes
ENSAMXG00000005845	nhp2	93	65.248	ENSPTRG00000050430	-	98	65.248	Pan_troglodytes
ENSAMXG00000005845	nhp2	100	74.510	ENSPANG00000019121	NHP2	100	74.510	Papio_anubis
ENSAMXG00000005845	nhp2	91	89.051	ENSPKIG00000006410	nhp2	100	88.079	Paramormyrops_kingsleyae
ENSAMXG00000005845	nhp2	100	74.233	ENSPMGG00000002916	nhp2	100	74.233	Periophthalmus_magnuspinnatus
ENSAMXG00000005845	nhp2	100	71.895	ENSPEMG00000023567	Nhp2	100	71.895	Peromyscus_maniculatus_bairdii
ENSAMXG00000005845	nhp2	96	62.069	ENSPMAG00000009888	nhp2	94	62.069	Petromyzon_marinus
ENSAMXG00000005845	nhp2	73	74.545	ENSPCIG00000019848	-	92	74.545	Phascolarctos_cinereus
ENSAMXG00000005845	nhp2	100	69.481	ENSPCIG00000002727	-	100	69.481	Phascolarctos_cinereus
ENSAMXG00000005845	nhp2	100	78.846	ENSPFOG00000002315	nhp2	100	78.846	Poecilia_formosa
ENSAMXG00000005845	nhp2	100	77.564	ENSPLAG00000019287	nhp2	100	77.564	Poecilia_latipinna
ENSAMXG00000005845	nhp2	100	78.846	ENSPMEG00000024346	nhp2	100	78.846	Poecilia_mexicana
ENSAMXG00000005845	nhp2	74	80.180	ENSPREG00000005005	nhp2	95	80.180	Poecilia_reticulata
ENSAMXG00000005845	nhp2	100	75.163	ENSPPYG00000016105	NHP2	100	75.163	Pongo_abelii
ENSAMXG00000005845	nhp2	100	74.510	ENSPCOG00000020708	NHP2	100	74.510	Propithecus_coquereli
ENSAMXG00000005845	nhp2	100	71.895	ENSPVAG00000001647	NHP2	100	71.895	Pteropus_vampyrus
ENSAMXG00000005845	nhp2	100	81.169	ENSPNYG00000022418	nhp2	100	82.468	Pundamilia_nyererei
ENSAMXG00000005845	nhp2	100	92.715	ENSPNAG00000013779	nhp2	100	92.715	Pygocentrus_nattereri
ENSAMXG00000005845	nhp2	100	71.895	ENSRNOG00000049622	LOC103690013	100	71.895	Rattus_norvegicus
ENSAMXG00000005845	nhp2	72	79.630	ENSRNOG00000004247	Nhp2	89	79.630	Rattus_norvegicus
ENSAMXG00000005845	nhp2	100	74.510	ENSRBIG00000018610	NHP2	100	74.510	Rhinopithecus_bieti
ENSAMXG00000005845	nhp2	100	64.238	ENSRROG00000044295	-	100	64.238	Rhinopithecus_roxellana
ENSAMXG00000005845	nhp2	100	74.510	ENSRROG00000043373	NHP2	100	74.510	Rhinopithecus_roxellana
ENSAMXG00000005845	nhp2	95	47.403	YDL208W	-	99	47.403	Saccharomyces_cerevisiae
ENSAMXG00000005845	nhp2	100	73.856	ENSSBOG00000027889	NHP2	100	73.856	Saimiri_boliviensis_boliviensis
ENSAMXG00000005845	nhp2	100	68.831	ENSSHAG00000015581	NHP2	100	68.831	Sarcophilus_harrisii
ENSAMXG00000005845	nhp2	100	88.079	ENSSFOG00015017061	nhp2	100	88.079	Scleropages_formosus
ENSAMXG00000005845	nhp2	100	78.846	ENSSMAG00000011251	nhp2	100	78.846	Scophthalmus_maximus
ENSAMXG00000005845	nhp2	100	84.314	ENSSDUG00000023355	nhp2	100	84.314	Seriola_dumerili
ENSAMXG00000005845	nhp2	74	81.081	ENSSLDG00000006293	nhp2	51	81.081	Seriola_lalandi_dorsalis
ENSAMXG00000005845	nhp2	100	75.000	ENSSPUG00000005173	NHP2	100	75.000	Sphenodon_punctatus
ENSAMXG00000005845	nhp2	100	81.699	ENSSPAG00000011696	nhp2	100	81.699	Stegastes_partitus
ENSAMXG00000005845	nhp2	100	74.510	ENSSSCG00000039635	-	86	74.510	Sus_scrofa
ENSAMXG00000005845	nhp2	100	60.784	ENSSSCG00000009710	-	100	60.784	Sus_scrofa
ENSAMXG00000005845	nhp2	66	70.707	ENSTGUG00000000368	NHP2	97	65.217	Taeniopygia_guttata
ENSAMXG00000005845	nhp2	100	76.101	ENSTRUG00000008183	nhp2	100	76.730	Takifugu_rubripes
ENSAMXG00000005845	nhp2	99	71.779	ENSTNIG00000004219	nhp2	99	73.620	Tetraodon_nigroviridis
ENSAMXG00000005845	nhp2	100	74.510	ENSUAMG00000025154	NHP2	100	74.510	Ursus_americanus
ENSAMXG00000005845	nhp2	99	73.333	ENSUMAG00000023916	NHP2	97	73.333	Ursus_maritimus
ENSAMXG00000005845	nhp2	72	71.171	ENSVPAG00000010059	NHP2	100	71.171	Vicugna_pacos
ENSAMXG00000005845	nhp2	100	63.333	ENSVVUG00000001030	NHP2	100	63.333	Vulpes_vulpes
ENSAMXG00000005845	nhp2	99	72.667	ENSXETG00000006731	nhp2	99	72.667	Xenopus_tropicalis
ENSAMXG00000005845	nhp2	100	80.769	ENSXMAG00000007031	nhp2	100	80.769	Xiphophorus_maculatus