EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000005878 (Gene tree)
Gene ID: 103028755
Gene Symbol: ddx28
Alias: zgc:153386
Full Name: DEAD-box helicase 28
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 1713 bases
Position: chrAPWO02000032.1:4278264-4279976
Accession: 103028755
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000006015	ResIII	PF04851.15	4.7e-06	1	1
ENSAMXP00000006015	DEAD	PF00270.29	8.2e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000006015	-	1713	XM_015605201	ENSAMXP00000006015	570 (aa)	XP_015460687	W5KEK4

Gene Model

Click here to download ENSAMXG00000005878's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000005878's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000005878	ddx28	65	39.062	ENSAMXG00000020882	eif4a3	85	39.062
ENSAMXG00000005878	ddx28	62	33.333	ENSAMXG00000002100	ddx1	53	33.333
ENSAMXG00000005878	ddx28	65	30.376	ENSAMXG00000015550	DDX5	57	30.376
ENSAMXG00000005878	ddx28	65	30.108	ENSAMXG00000004466	ddx5	55	30.362
ENSAMXG00000005878	ddx28	54	30.128	ENSAMXG00000042015	-	67	35.354
ENSAMXG00000005878	ddx28	70	31.017	ENSAMXG00000010727	ddx47	79	31.017
ENSAMXG00000005878	ddx28	69	30.348	ENSAMXG00000024377	ddx52	60	30.348

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000005878	ddx28	91	48.302	ENSG00000182810	DDX28	94	48.302	Homo_sapiens
ENSAMXG00000005878	ddx28	99	61.872	ENSAPOG00000000991	ddx28	98	61.872	Acanthochromis_polyacanthus
ENSAMXG00000005878	ddx28	91	48.393	ENSAMEG00000019426	DDX28	95	48.393	Ailuropoda_melanoleuca
ENSAMXG00000005878	ddx28	98	60.536	ENSACIG00000021615	ddx28	98	60.536	Amphilophus_citrinellus
ENSAMXG00000005878	ddx28	98	63.588	ENSAOCG00000004610	ddx28	95	63.588	Amphiprion_ocellaris
ENSAMXG00000005878	ddx28	98	63.410	ENSAPEG00000002143	ddx28	95	63.410	Amphiprion_percula
ENSAMXG00000005878	ddx28	92	65.275	ENSATEG00000018691	ddx28	91	65.275	Anabas_testudineus
ENSAMXG00000005878	ddx28	95	45.788	ENSACAG00000009755	DDX28	97	45.788	Anolis_carolinensis
ENSAMXG00000005878	ddx28	98	58.497	ENSACLG00000012984	ddx28	95	58.676	Astatotilapia_calliptera
ENSAMXG00000005878	ddx28	92	48.968	ENSBTAG00000004290	DDX28	97	48.288	Bos_taurus
ENSAMXG00000005878	ddx28	89	49.133	ENSCAFG00000020327	DDX28	94	49.133	Canis_familiaris
ENSAMXG00000005878	ddx28	89	49.133	ENSCAFG00020019785	DDX28	94	49.133	Canis_lupus_dingo
ENSAMXG00000005878	ddx28	90	49.810	ENSCHIG00000009658	DDX28	92	49.810	Capra_hircus
ENSAMXG00000005878	ddx28	91	49.053	ENSCPOG00000013746	DDX28	94	49.053	Cavia_porcellus
ENSAMXG00000005878	ddx28	91	48.496	ENSCSAG00000018472	DDX28	93	48.496	Chlorocebus_sabaeus
ENSAMXG00000005878	ddx28	84	50.104	ENSCPBG00000012105	DDX28	86	51.494	Chrysemys_picta_bellii
ENSAMXG00000005878	ddx28	64	36.757	ENSCSAVG00000006341	-	94	37.027	Ciona_savignyi
ENSAMXG00000005878	ddx28	88	48.833	ENSCGRG00001024412	Ddx28	94	49.027	Cricetulus_griseus_chok1gshd
ENSAMXG00000005878	ddx28	95	61.091	ENSCSEG00000011651	ddx28	95	61.091	Cynoglossus_semilaevis
ENSAMXG00000005878	ddx28	94	62.292	ENSCVAG00000004044	ddx28	94	62.292	Cyprinodon_variegatus
ENSAMXG00000005878	ddx28	99	65.499	ENSDARG00000060411	ddx28	99	65.499	Danio_rerio
ENSAMXG00000005878	ddx28	63	55.135	ENSDNOG00000033593	DDX28	99	56.216	Dasypus_novemcinctus
ENSAMXG00000005878	ddx28	92	47.566	ENSDORG00000028868	Ddx28	95	47.753	Dipodomys_ordii
ENSAMXG00000005878	ddx28	83	35.073	FBgn0086130	Dbp21E2	85	34.440	Drosophila_melanogaster
ENSAMXG00000005878	ddx28	91	49.336	ENSETEG00000001062	-	93	49.336	Echinops_telfairi
ENSAMXG00000005878	ddx28	83	44.845	ENSEBUG00000004791	ddx28	84	44.240	Eptatretus_burgeri
ENSAMXG00000005878	ddx28	91	48.204	ENSEASG00005020387	DDX28	94	48.204	Equus_asinus_asinus
ENSAMXG00000005878	ddx28	91	48.582	ENSECAG00000006451	DDX28	94	48.582	Equus_caballus
ENSAMXG00000005878	ddx28	72	44.604	ENSEEUG00000005017	DDX28	93	44.604	Erinaceus_europaeus
ENSAMXG00000005878	ddx28	94	63.956	ENSELUG00000005302	ddx28	99	64.407	Esox_lucius
ENSAMXG00000005878	ddx28	91	49.143	ENSFCAG00000012858	DDX28	93	49.143	Felis_catus
ENSAMXG00000005878	ddx28	92	63.118	ENSFHEG00000012573	ddx28	92	63.118	Fundulus_heteroclitus
ENSAMXG00000005878	ddx28	92	62.808	ENSGMOG00000017045	ddx28	97	62.808	Gadus_morhua
ENSAMXG00000005878	ddx28	91	43.503	ENSGALG00000048700	DDX28	90	43.173	Gallus_gallus
ENSAMXG00000005878	ddx28	98	59.213	ENSGAFG00000009249	ddx28	96	59.319	Gambusia_affinis
ENSAMXG00000005878	ddx28	92	63.308	ENSGACG00000016367	ddx28	95	63.308	Gasterosteus_aculeatus
ENSAMXG00000005878	ddx28	81	47.835	ENSGAGG00000004565	DDX28	98	47.835	Gopherus_agassizii
ENSAMXG00000005878	ddx28	91	48.491	ENSGGOG00000001220	DDX28	94	48.491	Gorilla_gorilla
ENSAMXG00000005878	ddx28	98	61.181	ENSHBUG00000001016	ddx28	95	61.181	Haplochromis_burtoni
ENSAMXG00000005878	ddx28	93	61.967	ENSHCOG00000017590	ddx28	94	61.967	Hippocampus_comes
ENSAMXG00000005878	ddx28	100	73.010	ENSIPUG00000017350	Ddx28	100	73.010	Ictalurus_punctatus
ENSAMXG00000005878	ddx28	92	48.417	ENSSTOG00000002064	DDX28	95	48.417	Ictidomys_tridecemlineatus
ENSAMXG00000005878	ddx28	92	48.308	ENSJJAG00000012460	-	95	48.308	Jaculus_jaculus
ENSAMXG00000005878	ddx28	92	62.689	ENSKMAG00000018183	ddx28	91	62.689	Kryptolebias_marmoratus
ENSAMXG00000005878	ddx28	99	62.500	ENSLBEG00000006072	ddx28	98	62.500	Labrus_bergylta
ENSAMXG00000005878	ddx28	92	56.489	ENSLACG00000005578	DDX28	88	56.489	Latimeria_chalumnae
ENSAMXG00000005878	ddx28	92	63.068	ENSLOCG00000017604	ddx28	92	63.068	Lepisosteus_oculatus
ENSAMXG00000005878	ddx28	91	48.780	ENSLAFG00000031239	DDX28	94	48.780	Loxodonta_africana
ENSAMXG00000005878	ddx28	91	48.308	ENSMMUG00000010836	DDX28	93	48.308	Macaca_mulatta
ENSAMXG00000005878	ddx28	93	63.653	ENSMAMG00000020220	ddx28	92	63.653	Mastacembelus_armatus
ENSAMXG00000005878	ddx28	98	61.538	ENSMZEG00005009292	ddx28	95	61.538	Maylandia_zebra
ENSAMXG00000005878	ddx28	91	39.439	ENSMICG00000012346	-	93	39.252	Microcebus_murinus
ENSAMXG00000005878	ddx28	92	48.872	ENSMOCG00000009815	Ddx28	95	48.872	Microtus_ochrogaster
ENSAMXG00000005878	ddx28	92	61.174	ENSMMOG00000000270	ddx28	91	61.686	Mola_mola
ENSAMXG00000005878	ddx28	91	49.621	ENSMODG00000005303	DDX28	92	50.000	Monodelphis_domestica
ENSAMXG00000005878	ddx28	94	64.432	ENSMALG00000008864	ddx28	92	64.432	Monopterus_albus
ENSAMXG00000005878	ddx28	91	47.619	MGP_CAROLIEiJ_G0031510	Ddx28	93	47.619	Mus_caroli
ENSAMXG00000005878	ddx28	91	48.000	ENSMUSG00000045538	Ddx28	93	48.000	Mus_musculus
ENSAMXG00000005878	ddx28	91	48.190	MGP_PahariEiJ_G0023110	Ddx28	93	48.190	Mus_pahari
ENSAMXG00000005878	ddx28	91	48.000	MGP_SPRETEiJ_G0032628	Ddx28	93	48.000	Mus_spretus
ENSAMXG00000005878	ddx28	67	51.276	ENSMPUG00000006915	DDX28	97	51.276	Mustela_putorius_furo
ENSAMXG00000005878	ddx28	91	49.049	ENSMLUG00000005899	DDX28	94	49.049	Myotis_lucifugus
ENSAMXG00000005878	ddx28	92	49.064	ENSNGAG00000015762	Ddx28	94	48.876	Nannospalax_galili
ENSAMXG00000005878	ddx28	97	61.331	ENSNBRG00000001337	ddx28	96	61.511	Neolamprologus_brichardi
ENSAMXG00000005878	ddx28	98	61.896	ENSONIG00000020597	ddx28	96	61.896	Oreochromis_niloticus
ENSAMXG00000005878	ddx28	51	51.864	ENSOANG00000003551	-	96	54.182	Ornithorhynchus_anatinus
ENSAMXG00000005878	ddx28	91	48.393	ENSOCUG00000023074	DDX28	94	48.582	Oryctolagus_cuniculus
ENSAMXG00000005878	ddx28	92	62.998	ENSORLG00000011968	ddx28	92	62.998	Oryzias_latipes
ENSAMXG00000005878	ddx28	92	63.068	ENSORLG00020001951	ddx28	93	63.068	Oryzias_latipes_hni
ENSAMXG00000005878	ddx28	92	62.998	ENSORLG00015023030	ddx28	93	62.998	Oryzias_latipes_hsok
ENSAMXG00000005878	ddx28	99	61.005	ENSOMEG00000012445	ddx28	100	61.005	Oryzias_melastigma
ENSAMXG00000005878	ddx28	91	49.434	ENSOGAG00000016895	DDX28	93	49.434	Otolemur_garnettii
ENSAMXG00000005878	ddx28	79	48.578	ENSOARG00000003313	DDX28	98	48.578	Ovis_aries
ENSAMXG00000005878	ddx28	91	45.747	ENSPPAG00000036971	DDX28	94	45.747	Pan_paniscus
ENSAMXG00000005878	ddx28	91	49.527	ENSPPRG00000018322	DDX28	94	49.527	Panthera_pardus
ENSAMXG00000005878	ddx28	91	48.015	ENSPTIG00000006444	DDX28	94	48.015	Panthera_tigris_altaica
ENSAMXG00000005878	ddx28	95	47.197	ENSPTRG00000008258	DDX28	94	48.393	Pan_troglodytes
ENSAMXG00000005878	ddx28	94	65.291	ENSPKIG00000021200	ddx28	96	65.291	Paramormyrops_kingsleyae
ENSAMXG00000005878	ddx28	97	58.140	ENSPMGG00000007908	ddx28	97	58.140	Periophthalmus_magnuspinnatus
ENSAMXG00000005878	ddx28	91	47.834	ENSPEMG00000003395	Ddx28	94	47.834	Peromyscus_maniculatus_bairdii
ENSAMXG00000005878	ddx28	96	60.469	ENSPFOG00000020952	ddx28	94	60.469	Poecilia_formosa
ENSAMXG00000005878	ddx28	96	60.469	ENSPFOG00000020838	DDX28	96	60.469	Poecilia_formosa
ENSAMXG00000005878	ddx28	96	60.469	ENSPLAG00000016292	ddx28	94	60.469	Poecilia_latipinna
ENSAMXG00000005878	ddx28	97	60.252	ENSPMEG00000011311	ddx28	94	60.252	Poecilia_mexicana
ENSAMXG00000005878	ddx28	92	62.167	ENSPREG00000002899	ddx28	89	62.167	Poecilia_reticulata
ENSAMXG00000005878	ddx28	91	48.302	ENSPPYG00000007481	DDX28	94	48.302	Pongo_abelii
ENSAMXG00000005878	ddx28	91	47.753	ENSPCOG00000024632	DDX28	94	47.753	Propithecus_coquereli
ENSAMXG00000005878	ddx28	98	61.538	ENSPNYG00000018804	ddx28	95	61.538	Pundamilia_nyererei
ENSAMXG00000005878	ddx28	94	82.210	ENSPNAG00000014597	ddx28	98	82.210	Pygocentrus_nattereri
ENSAMXG00000005878	ddx28	91	48.767	ENSRNOG00000019817	Ddx28	94	48.767	Rattus_norvegicus
ENSAMXG00000005878	ddx28	93	63.653	ENSSFOG00015010181	ddx28	99	61.828	Scleropages_formosus
ENSAMXG00000005878	ddx28	90	63.230	ENSSMAG00000006831	ddx28	94	63.230	Scophthalmus_maximus
ENSAMXG00000005878	ddx28	100	59.622	ENSSDUG00000003257	ddx28	99	59.622	Seriola_dumerili
ENSAMXG00000005878	ddx28	100	59.655	ENSSLDG00000004513	ddx28	99	59.655	Seriola_lalandi_dorsalis
ENSAMXG00000005878	ddx28	95	47.810	ENSSARG00000014169	DDX28	98	47.810	Sorex_araneus
ENSAMXG00000005878	ddx28	97	64.337	ENSSPAG00000000988	ddx28	96	64.337	Stegastes_partitus
ENSAMXG00000005878	ddx28	91	48.204	ENSSSCG00000026038	DDX28	94	48.393	Sus_scrofa
ENSAMXG00000005878	ddx28	94	58.879	ENSTRUG00000007815	ddx28	95	58.879	Takifugu_rubripes
ENSAMXG00000005878	ddx28	91	60.039	ENSTNIG00000011352	ddx28	99	60.039	Tetraodon_nigroviridis
ENSAMXG00000005878	ddx28	73	60.563	ENSTBEG00000017695	DDX28	75	60.563	Tupaia_belangeri
ENSAMXG00000005878	ddx28	91	48.960	ENSUAMG00000016116	DDX28	94	48.960	Ursus_americanus
ENSAMXG00000005878	ddx28	78	50.220	ENSUMAG00000019200	DDX28	89	50.220	Ursus_maritimus
ENSAMXG00000005878	ddx28	76	43.820	ENSVVUG00000012876	DDX28	84	43.820	Vulpes_vulpes
ENSAMXG00000005878	ddx28	89	46.654	ENSXETG00000005435	ddx28	96	46.654	Xenopus_tropicalis
ENSAMXG00000005878	ddx28	96	60.830	ENSXCOG00000012364	ddx28	95	60.830	Xiphophorus_couchianus
ENSAMXG00000005878	ddx28	98	60.465	ENSXMAG00000019603	ddx28	97	60.465	Xiphophorus_maculatus