EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000006018 (Gene tree)
Gene ID: 103044656
Gene Symbol: rab34b
Alias: si:dkey-220h13.7
Full Name: ras-related protein Rab-34
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 7998 bases
Position: chr14:6054496-6062493
Accession: 103044656
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000006166	MMR_HSR1	PF01926.23	1.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000006166	-	2736	XM_022676075	ENSAMXP00000006166	256 (aa)	XP_022531796	W5KF05

Gene Model

Click here to download ENSAMXG00000006018's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000006018's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000006018	rab34b	58	35.948	ENSAMXG00000014960	rab23	64	37.410
ENSAMXG00000006018	rab34b	63	38.125	ENSAMXG00000009935	rab30	59	37.584
ENSAMXG00000006018	rab34b	79	33.498	ENSAMXG00000038243	si:dkey-16l2.16	90	32.812
ENSAMXG00000006018	rab34b	79	32.524	ENSAMXG00000037623	-	88	30.769
ENSAMXG00000006018	rab34b	73	34.946	ENSAMXG00000032547	rab6a	80	34.857
ENSAMXG00000006018	rab34b	64	33.939	ENSAMXG00000036772	rab2a	71	31.818
ENSAMXG00000006018	rab34b	64	38.788	ENSAMXG00000037428	-	68	37.931
ENSAMXG00000006018	rab34b	65	37.059	ENSAMXG00000040126	-	56	35.669
ENSAMXG00000006018	rab34b	63	41.358	ENSAMXG00000039486	zgc:171927	70	40.397
ENSAMXG00000006018	rab34b	78	33.654	ENSAMXG00000032663	si:dkey-13a21.4	87	31.980
ENSAMXG00000006018	rab34b	80	31.455	ENSAMXG00000029712	rab25b	89	30.000
ENSAMXG00000006018	rab34b	99	44.487	ENSAMXG00000017266	rab36	100	44.487
ENSAMXG00000006018	rab34b	65	36.527	ENSAMXG00000033470	RAB15	72	35.897
ENSAMXG00000006018	rab34b	64	37.349	ENSAMXG00000041657	rab39ba	72	36.129
ENSAMXG00000006018	rab34b	79	33.971	ENSAMXG00000026476	rab9b	82	31.818
ENSAMXG00000006018	rab34b	79	36.634	ENSAMXG00000040604	-	90	35.602
ENSAMXG00000006018	rab34b	63	40.123	ENSAMXG00000034850	-	73	39.073
ENSAMXG00000006018	rab34b	68	36.207	ENSAMXG00000004630	rab6ba	81	36.196
ENSAMXG00000006018	rab34b	65	31.034	ENSAMXG00000035919	rab5ab	67	30.872
ENSAMXG00000006018	rab34b	65	34.731	ENSAMXG00000043951	rab15	73	33.974
ENSAMXG00000006018	rab34b	66	35.088	ENSAMXG00000040879	rab25a	79	35.088
ENSAMXG00000006018	rab34b	63	39.752	ENSAMXG00000030712	rab13	72	38.667
ENSAMXG00000006018	rab34b	68	36.313	ENSAMXG00000009640	rab14	70	35.669
ENSAMXG00000006018	rab34b	63	30.625	ENSAMXG00000043717	rab5c	66	30.201
ENSAMXG00000006018	rab34b	69	31.638	ENSAMXG00000032729	rab42a	77	30.723
ENSAMXG00000006018	rab34b	63	31.250	ENSAMXG00000036179	rab5aa	68	30.872
ENSAMXG00000006018	rab34b	79	32.524	ENSAMXG00000042655	rab11bb	88	30.769
ENSAMXG00000006018	rab34b	61	33.125	ENSAMXG00000026059	RAB9A	73	30.201
ENSAMXG00000006018	rab34b	68	31.667	ENSAMXG00000042419	rab3c	68	31.646
ENSAMXG00000006018	rab34b	61	37.821	ENSAMXG00000003155	rab11a	66	35.862
ENSAMXG00000006018	rab34b	64	37.870	ENSAMXG00000003717	rab39bb	72	36.709
ENSAMXG00000006018	rab34b	62	37.267	ENSAMXG00000004882	rab12	59	36.667
ENSAMXG00000006018	rab34b	79	36.139	ENSAMXG00000039865	rab35b	90	35.079
ENSAMXG00000006018	rab34b	100	65.891	ENSAMXG00000043003	rab34a	100	65.891
ENSAMXG00000006018	rab34b	63	40.123	ENSAMXG00000032564	rab1ab	73	39.073
ENSAMXG00000006018	rab34b	61	37.580	ENSAMXG00000033216	rab41	73	37.671
ENSAMXG00000006018	rab34b	69	31.818	ENSAMXG00000042073	rab18b	79	30.909
ENSAMXG00000006018	rab34b	79	34.826	ENSAMXG00000024632	rab11al	86	33.508
ENSAMXG00000006018	rab34b	63	40.123	ENSAMXG00000003547	rab1ba	66	39.073

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000006018	rab34b	84	75.349	ENSAPOG00000019147	rab34b	96	68.627	Acanthochromis_polyacanthus
ENSAMXG00000006018	rab34b	99	63.529	ENSACIG00000004859	rab34b	100	63.529	Amphilophus_citrinellus
ENSAMXG00000006018	rab34b	99	68.992	ENSAOCG00000007106	rab34b	94	68.992	Amphiprion_ocellaris
ENSAMXG00000006018	rab34b	85	75.229	ENSAPEG00000018607	rab34b	84	72.650	Amphiprion_percula
ENSAMXG00000006018	rab34b	92	72.152	ENSATEG00000006851	rab34b	93	72.152	Anabas_testudineus
ENSAMXG00000006018	rab34b	99	71.094	ENSACLG00000005733	rab34b	97	71.094	Astatotilapia_calliptera
ENSAMXG00000006018	rab34b	91	70.638	ENSCSEG00000018133	rab34b	93	70.638	Cynoglossus_semilaevis
ENSAMXG00000006018	rab34b	100	78.516	ENSDARG00000010977	rab34b	99	78.516	Danio_rerio
ENSAMXG00000006018	rab34b	99	72.266	ENSELUG00000005597	rab34b	99	72.266	Esox_lucius
ENSAMXG00000006018	rab34b	98	71.542	ENSFHEG00000004532	rab34b	99	71.542	Fundulus_heteroclitus
ENSAMXG00000006018	rab34b	80	71.359	ENSGMOG00000007140	rab34b	100	71.359	Gadus_morhua
ENSAMXG00000006018	rab34b	99	69.531	ENSGACG00000020514	rab34b	99	69.141	Gasterosteus_aculeatus
ENSAMXG00000006018	rab34b	100	79.457	ENSIPUG00000024531	rab34	100	79.457	Ictalurus_punctatus
ENSAMXG00000006018	rab34b	98	72.727	ENSKMAG00000019341	rab34b	99	72.727	Kryptolebias_marmoratus
ENSAMXG00000006018	rab34b	98	69.841	ENSLBEG00000027819	rab34b	90	78.889	Labrus_bergylta
ENSAMXG00000006018	rab34b	98	70.635	ENSMAMG00000020214	rab34b	99	70.635	Mastacembelus_armatus
ENSAMXG00000006018	rab34b	99	69.291	ENSMMOG00000010936	rab34b	87	69.291	Mola_mola
ENSAMXG00000006018	rab34b	92	70.886	ENSMALG00000018499	rab34b	89	70.886	Monopterus_albus
ENSAMXG00000006018	rab34b	98	71.146	ENSONIG00000005519	rab34b	99	71.146	Oreochromis_niloticus
ENSAMXG00000006018	rab34b	99	71.765	ENSORLG00000003119	rab34b	92	71.765	Oryzias_latipes
ENSAMXG00000006018	rab34b	99	71.260	ENSORLG00020016139	rab34b	92	71.260	Oryzias_latipes_hni
ENSAMXG00000006018	rab34b	99	72.157	ENSORLG00015000584	rab34b	92	72.157	Oryzias_latipes_hsok
ENSAMXG00000006018	rab34b	98	71.542	ENSOMEG00000010334	rab34b	96	72.881	Oryzias_melastigma
ENSAMXG00000006018	rab34b	100	69.767	ENSPKIG00000013326	rab34b	100	69.767	Paramormyrops_kingsleyae
ENSAMXG00000006018	rab34b	99	67.969	ENSPMGG00000021697	rab34b	100	67.969	Periophthalmus_magnuspinnatus
ENSAMXG00000006018	rab34b	99	71.765	ENSPFOG00000011444	rab34b	100	71.765	Poecilia_formosa
ENSAMXG00000006018	rab34b	98	71.937	ENSPLAG00000005074	rab34b	99	71.937	Poecilia_latipinna
ENSAMXG00000006018	rab34b	98	71.937	ENSPMEG00000013297	rab34b	99	71.937	Poecilia_mexicana
ENSAMXG00000006018	rab34b	98	71.542	ENSPREG00000009813	rab34b	99	71.542	Poecilia_reticulata
ENSAMXG00000006018	rab34b	99	64.706	ENSPNYG00000017153	rab34b	99	80.791	Pundamilia_nyererei
ENSAMXG00000006018	rab34b	92	90.336	ENSPNAG00000015040	rab34b	100	90.336	Pygocentrus_nattereri
ENSAMXG00000006018	rab34b	100	71.815	ENSSFOG00015005188	rab34	100	71.815	Scleropages_formosus
ENSAMXG00000006018	rab34b	92	72.034	ENSSMAG00000019926	rab34b	100	70.763	Scophthalmus_maximus
ENSAMXG00000006018	rab34b	99	71.318	ENSSDUG00000016760	rab34b	80	71.318	Seriola_dumerili
ENSAMXG00000006018	rab34b	71	80.328	ENSSLDG00000014812	rab34b	89	80.328	Seriola_lalandi_dorsalis
ENSAMXG00000006018	rab34b	98	69.960	ENSSPAG00000002801	rab34b	99	69.960	Stegastes_partitus
ENSAMXG00000006018	rab34b	95	70.082	ENSTRUG00000014481	rab34b	98	70.082	Takifugu_rubripes
ENSAMXG00000006018	rab34b	99	69.531	ENSTNIG00000016158	rab34b	99	69.531	Tetraodon_nigroviridis