EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000006164 (Gene tree)
Gene ID: 103046559
Gene Symbol: zgc:63587
Alias: -
Full Name: septin-2
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 36395 bases
Position: chr6:27083945-27120339
Accession: 103046559
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000006322	MMR_HSR1	PF01926.23	5.5e-08	1	1
ENSAMXP00000037874	MMR_HSR1	PF01926.23	6.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000006322	-	1008	-	ENSAMXP00000006322	335 (aa)	-	W5KFG1
ENSAMXT00000030615	-	6037	XM_007247194	ENSAMXP00000037874	363 (aa)	XP_007247256	-

Gene Model

Click here to download ENSAMXG00000006164's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000006164's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000006164	zgc:63587	86	62.414	ENSAMXG00000039803	sept15	67	61.565
ENSAMXG00000006164	zgc:63587	87	67.010	ENSAMXG00000020058	sept4a	76	61.128
ENSAMXG00000006164	zgc:63587	98	84.956	ENSAMXG00000039525	sept2	94	87.463
ENSAMXG00000006164	zgc:63587	86	47.423	ENSAMXG00000034678	sept9a	66	41.617
ENSAMXG00000006164	zgc:63587	87	59.184	ENSAMXG00000031256	zgc:162239	93	58.586
ENSAMXG00000006164	zgc:63587	87	45.238	ENSAMXG00000020162	sept8a	71	44.300
ENSAMXG00000006164	zgc:63587	86	62.069	ENSAMXG00000017358	sept7a	68	62.069
ENSAMXG00000006164	zgc:63587	87	42.857	ENSAMXG00000033660	sept6	70	42.208
ENSAMXG00000006164	zgc:63587	90	43.421	ENSAMXG00000018970	sept8b	69	43.421
ENSAMXG00000006164	zgc:63587	86	48.454	ENSAMXG00000018729	sept3	89	47.213
ENSAMXG00000006164	zgc:63587	87	58.104	ENSAMXG00000037346	SEPT4	82	65.818
ENSAMXG00000006164	zgc:63587	86	48.797	ENSAMXG00000013711	sept12	77	48.136
ENSAMXG00000006164	zgc:63587	79	58.113	ENSAMXG00000024643	sept7b	66	58.113
ENSAMXG00000006164	zgc:63587	86	48.110	ENSAMXG00000043013	sept9b	85	48.110
ENSAMXG00000006164	zgc:63587	96	58.571	ENSAMXG00000006159	sept5a	84	63.430

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000006164	zgc:63587	95	96.812	ENSAPOG00000021616	zgc:63587	99	96.812	Acanthochromis_polyacanthus
ENSAMXG00000006164	zgc:63587	84	97.386	ENSACIG00000006540	zgc:63587	99	97.386	Amphilophus_citrinellus
ENSAMXG00000006164	zgc:63587	95	95.942	ENSAOCG00000015026	zgc:63587	95	96.970	Amphiprion_ocellaris
ENSAMXG00000006164	zgc:63587	95	95.942	ENSAPEG00000017625	zgc:63587	95	96.970	Amphiprion_percula
ENSAMXG00000006164	zgc:63587	95	97.101	ENSATEG00000020519	zgc:63587	99	97.101	Anabas_testudineus
ENSAMXG00000006164	zgc:63587	96	93.123	ENSACAG00000000754	-	100	93.123	Anolis_carolinensis
ENSAMXG00000006164	zgc:63587	96	96.839	ENSACLG00000011287	zgc:63587	100	96.839	Astatotilapia_calliptera
ENSAMXG00000006164	zgc:63587	96	93.696	ENSCPBG00000010648	-	100	93.696	Chrysemys_picta_bellii
ENSAMXG00000006164	zgc:63587	95	97.110	ENSCSEG00000019626	zgc:63587	99	97.110	Cynoglossus_semilaevis
ENSAMXG00000006164	zgc:63587	95	95.652	ENSCVAG00000017959	zgc:63587	99	95.652	Cyprinodon_variegatus
ENSAMXG00000006164	zgc:63587	68	94.323	ENSDARG00000017140	zgc:63587	86	94.118	Danio_rerio
ENSAMXG00000006164	zgc:63587	96	97.135	ENSELUG00000009060	zgc:63587	100	97.135	Esox_lucius
ENSAMXG00000006164	zgc:63587	96	93.983	ENSFALG00000008010	-	100	93.983	Ficedula_albicollis
ENSAMXG00000006164	zgc:63587	95	95.942	ENSFHEG00000018583	zgc:63587	99	95.942	Fundulus_heteroclitus
ENSAMXG00000006164	zgc:63587	96	96.275	ENSGMOG00000013563	zgc:63587	100	96.275	Gadus_morhua
ENSAMXG00000006164	zgc:63587	96	94.556	ENSGALG00000001652	SEPT2L	100	94.556	Gallus_gallus
ENSAMXG00000006164	zgc:63587	95	96.232	ENSGAFG00000000805	zgc:63587	99	96.232	Gambusia_affinis
ENSAMXG00000006164	zgc:63587	95	96.232	ENSGACG00000005552	zgc:63587	99	96.232	Gasterosteus_aculeatus
ENSAMXG00000006164	zgc:63587	96	93.696	ENSGAGG00000014380	-	100	93.696	Gopherus_agassizii
ENSAMXG00000006164	zgc:63587	96	96.839	ENSHBUG00000013996	zgc:63587	100	96.839	Haplochromis_burtoni
ENSAMXG00000006164	zgc:63587	95	97.101	ENSHCOG00000005893	zgc:63587	99	97.101	Hippocampus_comes
ENSAMXG00000006164	zgc:63587	95	95.954	ENSKMAG00000003351	zgc:63587	99	95.954	Kryptolebias_marmoratus
ENSAMXG00000006164	zgc:63587	95	96.232	ENSLBEG00000025452	zgc:63587	99	96.232	Labrus_bergylta
ENSAMXG00000006164	zgc:63587	96	88.252	ENSLACG00000015335	zgc:63587	99	88.252	Latimeria_chalumnae
ENSAMXG00000006164	zgc:63587	96	96.848	ENSLOCG00000001793	zgc:63587	100	96.848	Lepisosteus_oculatus
ENSAMXG00000006164	zgc:63587	95	98.261	ENSMAMG00000014467	zgc:63587	99	98.261	Mastacembelus_armatus
ENSAMXG00000006164	zgc:63587	96	96.839	ENSMZEG00005009713	zgc:63587	100	96.839	Maylandia_zebra
ENSAMXG00000006164	zgc:63587	96	81.662	ENSMGAG00000001294	-	100	81.662	Meleagris_gallopavo
ENSAMXG00000006164	zgc:63587	90	98.000	ENSMMOG00000011692	zgc:63587	91	97.188	Mola_mola
ENSAMXG00000006164	zgc:63587	96	91.429	ENSMODG00000010193	-	95	91.429	Monodelphis_domestica
ENSAMXG00000006164	zgc:63587	84	96.732	ENSMALG00000020157	zgc:63587	99	96.732	Monopterus_albus
ENSAMXG00000006164	zgc:63587	96	96.839	ENSNBRG00000018582	-	100	96.839	Neolamprologus_brichardi
ENSAMXG00000006164	zgc:63587	96	96.839	ENSONIG00000014408	zgc:63587	100	96.839	Oreochromis_niloticus
ENSAMXG00000006164	zgc:63587	95	95.652	ENSORLG00000002669	zgc:63587	99	95.652	Oryzias_latipes
ENSAMXG00000006164	zgc:63587	95	95.652	ENSORLG00020005356	zgc:63587	99	95.652	Oryzias_latipes_hni
ENSAMXG00000006164	zgc:63587	95	95.652	ENSORLG00015015159	zgc:63587	99	95.652	Oryzias_latipes_hsok
ENSAMXG00000006164	zgc:63587	95	95.652	ENSOMEG00000017925	zgc:63587	99	95.652	Oryzias_melastigma
ENSAMXG00000006164	zgc:63587	98	94.833	ENSPKIG00000024604	zgc:63587	100	96.562	Paramormyrops_kingsleyae
ENSAMXG00000006164	zgc:63587	96	92.837	ENSPSIG00000002946	-	100	92.837	Pelodiscus_sinensis
ENSAMXG00000006164	zgc:63587	85	95.146	ENSPMGG00000018374	zgc:63587	99	95.146	Periophthalmus_magnuspinnatus
ENSAMXG00000006164	zgc:63587	96	92.837	ENSPCIG00000025491	-	100	92.837	Phascolarctos_cinereus
ENSAMXG00000006164	zgc:63587	95	95.942	ENSPFOG00000011730	zgc:63587	99	95.942	Poecilia_formosa
ENSAMXG00000006164	zgc:63587	95	95.942	ENSPLAG00000018604	zgc:63587	99	95.942	Poecilia_latipinna
ENSAMXG00000006164	zgc:63587	95	96.232	ENSPMEG00000004117	zgc:63587	99	96.232	Poecilia_mexicana
ENSAMXG00000006164	zgc:63587	95	95.942	ENSPREG00000011612	zgc:63587	99	95.942	Poecilia_reticulata
ENSAMXG00000006164	zgc:63587	96	96.552	ENSPNYG00000008409	zgc:63587	100	96.552	Pundamilia_nyererei
ENSAMXG00000006164	zgc:63587	98	98.034	ENSPNAG00000000463	zgc:63587	87	98.034	Pygocentrus_nattereri
ENSAMXG00000006164	zgc:63587	96	92.264	ENSSHAG00000011013	-	100	92.264	Sarcophilus_harrisii
ENSAMXG00000006164	zgc:63587	96	96.848	ENSSFOG00015014108	zgc:63587	100	96.848	Scleropages_formosus
ENSAMXG00000006164	zgc:63587	95	97.093	ENSSMAG00000006113	-	99	97.093	Scophthalmus_maximus
ENSAMXG00000006164	zgc:63587	93	97.033	ENSSDUG00000002763	zgc:63587	94	97.033	Seriola_dumerili
ENSAMXG00000006164	zgc:63587	95	97.391	ENSSLDG00000004826	zgc:63587	99	97.391	Seriola_lalandi_dorsalis
ENSAMXG00000006164	zgc:63587	96	93.410	ENSSPUG00000015358	-	100	93.410	Sphenodon_punctatus
ENSAMXG00000006164	zgc:63587	56	98.413	ENSSPAG00000000807	zgc:63587	63	98.485	Stegastes_partitus
ENSAMXG00000006164	zgc:63587	95	97.391	ENSSPAG00000015654	-	99	97.391	Stegastes_partitus
ENSAMXG00000006164	zgc:63587	96	93.696	ENSTGUG00000008445	-	100	93.696	Taeniopygia_guttata
ENSAMXG00000006164	zgc:63587	97	95.385	ENSTRUG00000016492	zgc:63587	99	96.812	Takifugu_rubripes
ENSAMXG00000006164	zgc:63587	95	96.812	ENSTNIG00000015927	zgc:63587	99	96.812	Tetraodon_nigroviridis
ENSAMXG00000006164	zgc:63587	96	93.948	ENSXETG00000018605	sept2-a	99	93.948	Xenopus_tropicalis
ENSAMXG00000006164	zgc:63587	91	96.049	ENSXCOG00000002678	zgc:63587	98	96.049	Xiphophorus_couchianus
ENSAMXG00000006164	zgc:63587	95	96.232	ENSXMAG00000014718	zgc:63587	99	96.232	Xiphophorus_maculatus