EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000006229 (Gene tree)
Gene ID: -
Gene Symbol: sharpin
Alias: sipl1
Full Name: SHANK associated RH domain interactor
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 10390 bases
Position: chr16:18831999-18842388
Accession: 103036427
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000006390	zf-RanBP	PF00641.18	4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000006390	-	1131	XM_022678152	ENSAMXP00000006390	377 (aa)	XP_022533873	W5KFM9

Gene Model

Click here to download ENSAMXG00000006229's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000006229's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000006229	sharpin	97	54.774	ENSAMXG00000021016	shrprbck1r	61	54.258

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000006229	sharpin	96	55.471	ENSAPOG00000023352	sharpin	87	56.489	Acanthochromis_polyacanthus
ENSAMXG00000006229	sharpin	97	59.278	ENSAPOG00000022737	shrprbck1r	54	59.278	Acanthochromis_polyacanthus
ENSAMXG00000006229	sharpin	97	59.840	ENSACIG00000002184	shrprbck1r	80	59.840	Amphilophus_citrinellus
ENSAMXG00000006229	sharpin	97	59.184	ENSAOCG00000002890	shrprbck1r	55	59.184	Amphiprion_ocellaris
ENSAMXG00000006229	sharpin	97	55.528	ENSAOCG00000017464	sharpin	88	56.533	Amphiprion_ocellaris
ENSAMXG00000006229	sharpin	97	60.052	ENSAPEG00000023274	shrprbck1r	54	60.052	Amphiprion_percula
ENSAMXG00000006229	sharpin	96	55.725	ENSAPEG00000004049	sharpin	87	56.743	Amphiprion_percula
ENSAMXG00000006229	sharpin	96	57.841	ENSATEG00000007832	sharpin	80	57.841	Anabas_testudineus
ENSAMXG00000006229	sharpin	97	59.269	ENSATEG00000014561	shrprbck1r	54	59.580	Anabas_testudineus
ENSAMXG00000006229	sharpin	70	77.778	ENSACLG00000020160	-	83	77.778	Astatotilapia_calliptera
ENSAMXG00000006229	sharpin	97	58.684	ENSACLG00000022609	shrprbck1r	55	57.436	Astatotilapia_calliptera
ENSAMXG00000006229	sharpin	96	54.211	ENSCSEG00000011306	shrprbck1r	53	54.211	Cynoglossus_semilaevis
ENSAMXG00000006229	sharpin	97	55.527	ENSCVAG00000007250	shrprbck1r	55	55.527	Cyprinodon_variegatus
ENSAMXG00000006229	sharpin	96	53.197	ENSCVAG00000006586	sharpin	87	53.197	Cyprinodon_variegatus
ENSAMXG00000006229	sharpin	99	64.194	ENSDARG00000076995	sharpin	97	64.194	Danio_rerio
ENSAMXG00000006229	sharpin	96	54.156	ENSDARG00000059871	shrprbck1r	82	54.156	Danio_rerio
ENSAMXG00000006229	sharpin	97	57.252	ENSELUG00000016022	shrprbck1r	55	57.252	Esox_lucius
ENSAMXG00000006229	sharpin	96	52.645	ENSFHEG00000013564	sharpin	87	53.708	Fundulus_heteroclitus
ENSAMXG00000006229	sharpin	79	65.714	ENSGMOG00000010123	sharpin	82	65.714	Gadus_morhua
ENSAMXG00000006229	sharpin	96	46.631	ENSGAFG00000021405	sharpin	85	46.631	Gambusia_affinis
ENSAMXG00000006229	sharpin	97	56.021	ENSGAFG00000009309	shrprbck1r	54	56.021	Gambusia_affinis
ENSAMXG00000006229	sharpin	97	57.179	ENSHBUG00000021933	shrprbck1r	55	57.692	Haplochromis_burtoni
ENSAMXG00000006229	sharpin	99	53.766	ENSHCOG00000018847	sharpin	76	55.065	Hippocampus_comes
ENSAMXG00000006229	sharpin	97	53.266	ENSIPUG00000014247	shrprbck1r	54	53.266	Ictalurus_punctatus
ENSAMXG00000006229	sharpin	96	78.495	ENSIPUG00000011951	sharpin	99	78.495	Ictalurus_punctatus
ENSAMXG00000006229	sharpin	97	56.709	ENSKMAG00000015215	shrprbck1r	55	56.709	Kryptolebias_marmoratus
ENSAMXG00000006229	sharpin	96	57.963	ENSKMAG00000015204	sharpin	79	56.048	Kryptolebias_marmoratus
ENSAMXG00000006229	sharpin	96	58.270	ENSLBEG00000016624	sharpin	87	58.270	Labrus_bergylta
ENSAMXG00000006229	sharpin	97	56.777	ENSLBEG00000016876	shrprbck1r	55	56.777	Labrus_bergylta
ENSAMXG00000006229	sharpin	97	47.619	ENSLACG00000010948	-	57	47.619	Latimeria_chalumnae
ENSAMXG00000006229	sharpin	98	58.105	ENSLOCG00000008910	shrprbck1r	55	58.105	Lepisosteus_oculatus
ENSAMXG00000006229	sharpin	97	56.883	ENSMAMG00000022930	shrprbck1r	55	56.883	Mastacembelus_armatus
ENSAMXG00000006229	sharpin	78	80.000	ENSMAMG00000014645	sharpin	81	80.000	Mastacembelus_armatus
ENSAMXG00000006229	sharpin	97	57.436	ENSMZEG00005021257	shrprbck1r	55	57.436	Maylandia_zebra
ENSAMXG00000006229	sharpin	63	55.696	ENSMMOG00000016788	sharpin	61	55.696	Mola_mola
ENSAMXG00000006229	sharpin	97	56.848	ENSMMOG00000003764	shrprbck1r	54	56.848	Mola_mola
ENSAMXG00000006229	sharpin	80	80.000	ENSMALG00000020528	sharpin	85	80.000	Monopterus_albus
ENSAMXG00000006229	sharpin	97	57.143	ENSMALG00000008861	shrprbck1r	55	57.143	Monopterus_albus
ENSAMXG00000006229	sharpin	97	57.692	ENSNBRG00000002270	shrprbck1r	55	57.692	Neolamprologus_brichardi
ENSAMXG00000006229	sharpin	82	50.479	ENSNBRG00000012382	sharpin	91	51.757	Neolamprologus_brichardi
ENSAMXG00000006229	sharpin	97	57.881	ENSONIG00000014401	shrprbck1r	54	57.881	Oreochromis_niloticus
ENSAMXG00000006229	sharpin	96	53.000	ENSONIG00000009626	-	99	53.306	Oreochromis_niloticus
ENSAMXG00000006229	sharpin	97	55.838	ENSORLG00000017281	sharpin	87	56.853	Oryzias_latipes
ENSAMXG00000006229	sharpin	97	53.728	ENSORLG00000007392	shrprbck1r	55	53.728	Oryzias_latipes
ENSAMXG00000006229	sharpin	97	55.838	ENSORLG00020000801	sharpin	87	56.853	Oryzias_latipes_hni
ENSAMXG00000006229	sharpin	97	53.985	ENSORLG00020018619	shrprbck1r	55	53.985	Oryzias_latipes_hni
ENSAMXG00000006229	sharpin	97	55.838	ENSORLG00015009860	sharpin	87	56.853	Oryzias_latipes_hsok
ENSAMXG00000006229	sharpin	97	54.359	ENSORLG00015018865	shrprbck1r	54	54.359	Oryzias_latipes_hsok
ENSAMXG00000006229	sharpin	97	46.361	ENSOMEG00000005729	sharpin	80	47.439	Oryzias_melastigma
ENSAMXG00000006229	sharpin	97	55.270	ENSOMEG00000012749	shrprbck1r	55	56.041	Oryzias_melastigma
ENSAMXG00000006229	sharpin	97	57.035	ENSPKIG00000018308	-	81	57.468	Paramormyrops_kingsleyae
ENSAMXG00000006229	sharpin	97	61.735	ENSPKIG00000006933	shrprbck1r	54	61.735	Paramormyrops_kingsleyae
ENSAMXG00000006229	sharpin	55	76.000	ENSPMGG00000019318	sharpin	85	66.667	Periophthalmus_magnuspinnatus
ENSAMXG00000006229	sharpin	97	55.820	ENSPMGG00000013254	shrprbck1r	53	55.820	Periophthalmus_magnuspinnatus
ENSAMXG00000006229	sharpin	96	54.337	ENSPFOG00000015253	sharpin	87	54.337	Poecilia_formosa
ENSAMXG00000006229	sharpin	97	56.104	ENSPFOG00000004214	shrprbck1r	81	56.104	Poecilia_formosa
ENSAMXG00000006229	sharpin	96	54.337	ENSPLAG00000000423	sharpin	87	54.337	Poecilia_latipinna
ENSAMXG00000006229	sharpin	97	56.104	ENSPLAG00000020523	shrprbck1r	54	56.104	Poecilia_latipinna
ENSAMXG00000006229	sharpin	96	45.135	ENSPMEG00000023030	sharpin	79	45.135	Poecilia_mexicana
ENSAMXG00000006229	sharpin	97	56.283	ENSPMEG00000006877	shrprbck1r	54	56.283	Poecilia_mexicana
ENSAMXG00000006229	sharpin	97	56.053	ENSPREG00000014689	shrprbck1r	54	56.053	Poecilia_reticulata
ENSAMXG00000006229	sharpin	96	53.944	ENSPREG00000009702	sharpin	87	53.944	Poecilia_reticulata
ENSAMXG00000006229	sharpin	97	57.692	ENSPNYG00000022601	shrprbck1r	55	57.692	Pundamilia_nyererei
ENSAMXG00000006229	sharpin	97	81.744	ENSPNAG00000002911	sharpin	99	81.744	Pygocentrus_nattereri
ENSAMXG00000006229	sharpin	97	55.198	ENSPNAG00000007847	shrprbck1r	55	55.198	Pygocentrus_nattereri
ENSAMXG00000006229	sharpin	92	61.667	ENSSFOG00015004028	sharpin	84	46.667	Scleropages_formosus
ENSAMXG00000006229	sharpin	97	58.673	ENSSMAG00000018085	shrprbck1r	55	58.929	Scophthalmus_maximus
ENSAMXG00000006229	sharpin	97	57.254	ENSSDUG00000002959	shrprbck1r	54	57.623	Seriola_dumerili
ENSAMXG00000006229	sharpin	96	45.974	ENSSDUG00000019039	sharpin	85	45.974	Seriola_dumerili
ENSAMXG00000006229	sharpin	97	56.555	ENSSLDG00000009026	shrprbck1r	55	56.923	Seriola_lalandi_dorsalis
ENSAMXG00000006229	sharpin	66	73.333	ENSSPAG00000021807	sharpin	90	73.333	Stegastes_partitus
ENSAMXG00000006229	sharpin	97	59.021	ENSSPAG00000016097	shrprbck1r	56	59.021	Stegastes_partitus
ENSAMXG00000006229	sharpin	96	53.403	ENSTRUG00000011046	sharpin	86	53.403	Takifugu_rubripes
ENSAMXG00000006229	sharpin	97	56.955	ENSTRUG00000006949	shrprbck1r	53	56.955	Takifugu_rubripes
ENSAMXG00000006229	sharpin	96	54.082	ENSTNIG00000008521	sharpin	93	54.082	Tetraodon_nigroviridis
ENSAMXG00000006229	sharpin	97	56.533	ENSXCOG00000006701	shrprbck1r	53	56.533	Xiphophorus_couchianus
ENSAMXG00000006229	sharpin	96	46.011	ENSXCOG00000015019	sharpin	86	46.011	Xiphophorus_couchianus
ENSAMXG00000006229	sharpin	96	54.082	ENSXMAG00000022076	sharpin	87	54.082	Xiphophorus_maculatus
ENSAMXG00000006229	sharpin	97	56.533	ENSXMAG00000018972	shrprbck1r	53	56.533	Xiphophorus_maculatus