EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSAMXG00000006495 (Gene tree)
Gene ID
103043439
Gene Symbol
rpl13
Alias
zgc:92272
Full Name
ribosomal protein L13
Gene Type
protein_coding
Species
Astyanax_mexicanus
Status
putative
Strand
Plus strand
Length
6805 bases
Position
chr5:35195749-35202553
Accession
103043439
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAMXP00000006686Ribosomal_L13ePF01294.181.4e-8211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAMXT00000006686-1390XM_007234224ENSAMXP00000006686211 (aa)XP_007234286W5KGH4
Gene Model
Click here to download ENSAMXG00000006495's gene model file
Pathways
Pathway IDPathway NameSource
amex03010RibosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000006495's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAMXG00000006495rpl1310084.834ENSG00000167526RPL1310090.741Homo_sapiens
ENSAMXG00000006495rpl1310089.573ENSAPOG00000010933rpl1310089.573Acanthochromis_polyacanthus
ENSAMXG00000006495rpl1310076.303ENSAMEG00000001111RPL1310076.887Ailuropoda_melanoleuca
ENSAMXG00000006495rpl1310090.047ENSACIG00000000422rpl1310090.047Amphilophus_citrinellus
ENSAMXG00000006495rpl1310089.573ENSAOCG00000014635rpl1310089.573Amphiprion_ocellaris
ENSAMXG00000006495rpl1310089.573ENSAPEG00000011271rpl1310089.573Amphiprion_percula
ENSAMXG00000006495rpl1310090.047ENSATEG00000004902rpl1310090.047Anabas_testudineus
ENSAMXG00000006495rpl1310085.308ENSACAG00000017072RPL1310085.308Anolis_carolinensis
ENSAMXG00000006495rpl1310084.834ENSANAG00000030539RPL1310084.834Aotus_nancymaae
ENSAMXG00000006495rpl1310089.573ENSACLG00000001642rpl1310089.573Astatotilapia_calliptera
ENSAMXG00000006495rpl1310085.308ENSBTAG00000012044RPL137285.308Bos_taurus
ENSAMXG00000006495rpl1310076.303ENSBTAG00000033143-10076.303Bos_taurus
ENSAMXG00000006495rpl139858.252WBGene00004425rpl-139958.252Caenorhabditis_elegans
ENSAMXG00000006495rpl139984.286ENSCJAG00000016268-9984.286Callithrix_jacchus
ENSAMXG00000006495rpl1310084.834ENSCJAG00000009672-10084.834Callithrix_jacchus
ENSAMXG00000006495rpl1310085.308ENSCAFG00000019840RPL1310085.308Canis_familiaris
ENSAMXG00000006495rpl138751.913ENSCAFG00000002388-10050.820Canis_familiaris
ENSAMXG00000006495rpl139563.184ENSCAFG00020024795-7572.500Canis_lupus_dingo
ENSAMXG00000006495rpl1310085.308ENSCAFG00020005125RPL1310085.308Canis_lupus_dingo
ENSAMXG00000006495rpl1310070.142ENSCHIG00000026795-9270.142Capra_hircus
ENSAMXG00000006495rpl1310085.308ENSCHIG00000001441-10085.308Capra_hircus
ENSAMXG00000006495rpl139579.104ENSCHIG00000017227-8779.104Capra_hircus
ENSAMXG00000006495rpl1310084.360ENSTSYG00000027423RPL1310084.360Carlito_syrichta
ENSAMXG00000006495rpl1310085.308ENSCPOG00000027348RPL1310085.308Cavia_porcellus
ENSAMXG00000006495rpl1310084.834ENSCCAG00000024248RPL1310084.834Cebus_capucinus
ENSAMXG00000006495rpl1310085.308ENSCATG00000042426RPL1310085.308Cercocebus_atys
ENSAMXG00000006495rpl139963.333ENSCATG00000038806-9663.333Cercocebus_atys
ENSAMXG00000006495rpl1310085.308ENSCLAG00000003801RPL1310085.308Chinchilla_lanigera
ENSAMXG00000006495rpl1310084.360ENSCSAG00000000476-10084.360Chlorocebus_sabaeus
ENSAMXG00000006495rpl1310086.256ENSCPBG00000013618RPL1310086.256Chrysemys_picta_bellii
ENSAMXG00000006495rpl139767.157ENSCING00000002582-9267.157Ciona_intestinalis
ENSAMXG00000006495rpl139763.235ENSCSAVG00000007075-9865.714Ciona_savignyi
ENSAMXG00000006495rpl136785.915ENSCANG00000028258RPL137785.915Colobus_angolensis_palliatus
ENSAMXG00000006495rpl139363.452ENSCGRG00001008381-10063.452Cricetulus_griseus_chok1gshd
ENSAMXG00000006495rpl1310069.194ENSCGRG00001023328-10069.194Cricetulus_griseus_chok1gshd
ENSAMXG00000006495rpl1310084.834ENSCGRG00001022563Rpl1310084.834Cricetulus_griseus_chok1gshd
ENSAMXG00000006495rpl1310084.360ENSCGRG00000014556Rpl1310084.360Cricetulus_griseus_crigri
ENSAMXG00000006495rpl138565.000ENSCGRG00000016503-10065.000Cricetulus_griseus_crigri
ENSAMXG00000006495rpl1310089.100ENSCSEG00000008346rpl1310089.100Cynoglossus_semilaevis
ENSAMXG00000006495rpl1310090.995ENSCVAG00000019742rpl1310090.995Cyprinodon_variegatus
ENSAMXG00000006495rpl1310089.573ENSDARG00000099380rpl1310089.573Danio_rerio
ENSAMXG00000006495rpl1310084.834ENSDNOG00000034247RPL1310084.834Dasypus_novemcinctus
ENSAMXG00000006495rpl138182.941ENSDORG00000028330Rpl1310082.941Dipodomys_ordii
ENSAMXG00000006495rpl139561.650FBgn0011272RpL139361.650Drosophila_melanogaster
ENSAMXG00000006495rpl139055.026ENSETEG00000004518-9955.319Echinops_telfairi
ENSAMXG00000006495rpl139870.952ENSETEG00000015057-9870.952Echinops_telfairi
ENSAMXG00000006495rpl1310066.825ENSEBUG00000000730rpl139966.825Eptatretus_burgeri
ENSAMXG00000006495rpl139953.333ENSEEUG00000006113-9952.857Erinaceus_europaeus
ENSAMXG00000006495rpl136682.143ENSEEUG00000011190-10082.143Erinaceus_europaeus
ENSAMXG00000006495rpl1310085.782ENSELUG00000014509rpl1310085.782Esox_lucius
ENSAMXG00000006495rpl138756.452ENSFCAG00000029961-9352.941Felis_catus
ENSAMXG00000006495rpl1310083.412ENSFCAG00000003338RPL1310083.412Felis_catus
ENSAMXG00000006495rpl1310088.152ENSFALG00000003173RPL1310088.152Ficedula_albicollis
ENSAMXG00000006495rpl1310085.308ENSFDAG00000011310RPL1310085.308Fukomys_damarensis
ENSAMXG00000006495rpl1310090.995ENSFHEG00000006122rpl1310090.995Fundulus_heteroclitus
ENSAMXG00000006495rpl1310082.938ENSGMOG00000002752rpl1310081.517Gadus_morhua
ENSAMXG00000006495rpl1310086.730ENSGALG00000006179RPL1310086.730Gallus_gallus
ENSAMXG00000006495rpl1310083.886ENSGAFG00000017260rpl1310083.886Gambusia_affinis
ENSAMXG00000006495rpl1310085.782ENSGACG00000015752rpl1310085.782Gasterosteus_aculeatus
ENSAMXG00000006495rpl1310086.730ENSGAGG00000003371RPL1310086.730Gopherus_agassizii
ENSAMXG00000006495rpl1310068.246ENSGGOG00000026762-10068.246Gorilla_gorilla
ENSAMXG00000006495rpl138384.659ENSGGOG00000025427RPL139884.302Gorilla_gorilla
ENSAMXG00000006495rpl1310090.047ENSHBUG00000013579rpl1310090.047Haplochromis_burtoni
ENSAMXG00000006495rpl1310084.834ENSHGLG00000010880RPL1310084.834Heterocephalus_glaber_female
ENSAMXG00000006495rpl1310084.834ENSHGLG00100018449RPL1310084.834Heterocephalus_glaber_male
ENSAMXG00000006495rpl1310088.626ENSHCOG00000002997rpl1310088.626Hippocampus_comes
ENSAMXG00000006495rpl1310088.626ENSIPUG00000009775rpl1310088.626Ictalurus_punctatus
ENSAMXG00000006495rpl1310083.412ENSSTOG00000011963RPL1310081.991Ictidomys_tridecemlineatus
ENSAMXG00000006495rpl1310071.090ENSJJAG00000000236-10071.090Jaculus_jaculus
ENSAMXG00000006495rpl1310084.834ENSJJAG00000014012Rpl1310084.834Jaculus_jaculus
ENSAMXG00000006495rpl1310090.047ENSKMAG00000006540rpl1310090.047Kryptolebias_marmoratus
ENSAMXG00000006495rpl1310088.626ENSLBEG00000026455rpl1310088.626Labrus_bergylta
ENSAMXG00000006495rpl139162.694ENSLACG00000000752-9066.667Latimeria_chalumnae
ENSAMXG00000006495rpl136066.667ENSLACG00000001306-9166.116Latimeria_chalumnae
ENSAMXG00000006495rpl136182.031ENSLACG00000014843-9582.031Latimeria_chalumnae
ENSAMXG00000006495rpl139164.975ENSLACG00000002299-9464.975Latimeria_chalumnae
ENSAMXG00000006495rpl135679.832ENSLACG00000005311-10079.832Latimeria_chalumnae
ENSAMXG00000006495rpl138466.292ENSLACG00000004644-9766.474Latimeria_chalumnae
ENSAMXG00000006495rpl1310089.100ENSLACG00000013768rpl1310089.100Latimeria_chalumnae
ENSAMXG00000006495rpl1310089.100ENSLOCG00000004063rpl1310089.100Lepisosteus_oculatus
ENSAMXG00000006495rpl1310083.886ENSLAFG00000004054RPL1310083.886Loxodonta_africana
ENSAMXG00000006495rpl1310084.834ENSMFAG00000027717-10084.834Macaca_fascicularis
ENSAMXG00000006495rpl1310062.559ENSMFAG00000046109-9762.559Macaca_fascicularis
ENSAMXG00000006495rpl139962.381ENSMMUG00000038060-9662.381Macaca_mulatta
ENSAMXG00000006495rpl1310084.834ENSMMUG00000017928RPL1310084.834Macaca_mulatta
ENSAMXG00000006495rpl139962.857ENSMNEG00000030483-9662.857Macaca_nemestrina
ENSAMXG00000006495rpl139360.199ENSMNEG00000033097-8665.497Macaca_nemestrina
ENSAMXG00000006495rpl139964.762ENSMLEG00000033776-9664.762Mandrillus_leucophaeus
ENSAMXG00000006495rpl1310066.351ENSMLEG00000036728-10066.351Mandrillus_leucophaeus
ENSAMXG00000006495rpl1310090.521ENSMAMG00000021552rpl1310090.521Mastacembelus_armatus
ENSAMXG00000006495rpl1310089.573ENSMZEG00005014343rpl1310089.573Maylandia_zebra
ENSAMXG00000006495rpl138487.006ENSMGAG00000008027RPL139786.628Meleagris_gallopavo
ENSAMXG00000006495rpl137582.390ENSMAUG00000020543-10082.390Mesocricetus_auratus
ENSAMXG00000006495rpl1310081.043ENSMAUG00000016802-10081.043Mesocricetus_auratus
ENSAMXG00000006495rpl136684.286ENSMICG00000027620-8184.286Microcebus_murinus
ENSAMXG00000006495rpl1310084.360ENSMICG00000043954-10084.360Microcebus_murinus
ENSAMXG00000006495rpl1310074.882ENSMOCG00000016985-10074.408Microtus_ochrogaster
ENSAMXG00000006495rpl1310085.308ENSMOCG00000009058-10085.308Microtus_ochrogaster
ENSAMXG00000006495rpl1310083.886ENSMOCG00000002216-10083.886Microtus_ochrogaster
ENSAMXG00000006495rpl1310069.194ENSMOCG00000011602-10069.194Microtus_ochrogaster
ENSAMXG00000006495rpl1310076.303ENSMOCG00000021875-10074.408Microtus_ochrogaster
ENSAMXG00000006495rpl1310090.047ENSMMOG00000016577rpl1310090.047Mola_mola
ENSAMXG00000006495rpl1310084.834ENSMODG00000003663RPL1310084.834Monodelphis_domestica
ENSAMXG00000006495rpl1310090.047ENSMALG00000020934rpl1310090.047Monopterus_albus
ENSAMXG00000006495rpl1310084.834MGP_CAROLIEiJ_G0031676Rpl1310084.834Mus_caroli
ENSAMXG00000006495rpl1310085.308ENSMUSG00000000740Rpl1310085.308Mus_musculus
ENSAMXG00000006495rpl137276.119MGP_PahariEiJ_G0022842-8186.207Mus_pahari
ENSAMXG00000006495rpl1310084.834MGP_PahariEiJ_G0023274Rpl1310084.834Mus_pahari
ENSAMXG00000006495rpl1310084.834MGP_SPRETEiJ_G0032794Rpl1310084.834Mus_spretus
ENSAMXG00000006495rpl139479.899MGP_SPRETEiJ_G0031839-7879.899Mus_spretus
ENSAMXG00000006495rpl139948.804ENSMPUG00000001481-9647.847Mustela_putorius_furo
ENSAMXG00000006495rpl1310085.308ENSMLUG00000010950RPL139485.308Myotis_lucifugus
ENSAMXG00000006495rpl138458.427ENSNGAG00000012072-9558.140Nannospalax_galili
ENSAMXG00000006495rpl1310084.834ENSNGAG00000018467Rpl1310084.834Nannospalax_galili
ENSAMXG00000006495rpl138763.934ENSNGAG00000014655-9563.934Nannospalax_galili
ENSAMXG00000006495rpl1310090.047ENSNBRG00000011031rpl1310090.047Neolamprologus_brichardi
ENSAMXG00000006495rpl1310084.834ENSNLEG00000015774RPL1310084.834Nomascus_leucogenys
ENSAMXG00000006495rpl1310067.925ENSNLEG00000028759-10068.396Nomascus_leucogenys
ENSAMXG00000006495rpl1310084.360ENSODEG00000004235-10084.360Octodon_degus
ENSAMXG00000006495rpl1310082.938ENSODEG00000019297-10082.938Octodon_degus
ENSAMXG00000006495rpl1310082.464ENSODEG00000020384-10082.464Octodon_degus
ENSAMXG00000006495rpl1310081.517ENSODEG00000019915-10081.517Octodon_degus
ENSAMXG00000006495rpl1310084.360ENSODEG00000019458-10084.360Octodon_degus
ENSAMXG00000006495rpl1310080.095ENSODEG00000019351-10080.095Octodon_degus
ENSAMXG00000006495rpl1310090.047ENSONIG00000005934rpl1310090.047Oreochromis_niloticus
ENSAMXG00000006495rpl1310085.308ENSOANG00000006729RPL1310085.308Ornithorhynchus_anatinus
ENSAMXG00000006495rpl1310077.725ENSOCUG00000007536-10077.251Oryctolagus_cuniculus
ENSAMXG00000006495rpl1310079.621ENSOCUG00000022399-10080.095Oryctolagus_cuniculus
ENSAMXG00000006495rpl1310080.569ENSOCUG00000024415-10081.043Oryctolagus_cuniculus
ENSAMXG00000006495rpl1310089.573ENSORLG00000007654rpl1310089.573Oryzias_latipes
ENSAMXG00000006495rpl1310090.521ENSORLG00020009960rpl1310090.521Oryzias_latipes_hni
ENSAMXG00000006495rpl1310090.521ENSORLG00015008108rpl1310090.521Oryzias_latipes_hsok
ENSAMXG00000006495rpl1310090.995ENSOMEG00000001728rpl1310090.995Oryzias_melastigma
ENSAMXG00000006495rpl1310085.308ENSOGAG00000026444RPL1310085.308Otolemur_garnettii
ENSAMXG00000006495rpl1310078.199ENSOARG00000003957-7178.199Ovis_aries
ENSAMXG00000006495rpl135359.821ENSOARG00000011291-6162.376Ovis_aries
ENSAMXG00000006495rpl1310067.773ENSPPAG00000041631-10067.773Pan_paniscus
ENSAMXG00000006495rpl139980.476ENSPPAG00000042590-9680.476Pan_paniscus
ENSAMXG00000006495rpl138384.571ENSPPAG00000029415-9884.211Pan_paniscus
ENSAMXG00000006495rpl138456.593ENSPPRG00000006057-8653.333Panthera_pardus
ENSAMXG00000006495rpl1310083.412ENSPPRG00000003949RPL1310083.412Panthera_pardus
ENSAMXG00000006495rpl136280.769ENSPTIG00000010985RPL138680.769Panthera_tigris_altaica
ENSAMXG00000006495rpl138456.593ENSPTIG00000014719-8653.333Panthera_tigris_altaica
ENSAMXG00000006495rpl1310067.299ENSPTRG00000047911-10067.299Pan_troglodytes
ENSAMXG00000006495rpl1310080.569ENSPTRG00000041770-10080.569Pan_troglodytes
ENSAMXG00000006495rpl1310084.834ENSPTRG00000008480RPL1310084.834Pan_troglodytes
ENSAMXG00000006495rpl1310085.308ENSPANG00000031667RPL1310085.308Papio_anubis
ENSAMXG00000006495rpl1310090.047ENSPKIG00000001789rpl1310090.047Paramormyrops_kingsleyae
ENSAMXG00000006495rpl1310087.204ENSPSIG00000015634RPL1310087.204Pelodiscus_sinensis
ENSAMXG00000006495rpl1310088.152ENSPMGG00000006067rpl1310088.152Periophthalmus_magnuspinnatus
ENSAMXG00000006495rpl1310085.308ENSPEMG00000010342Rpl1310085.308Peromyscus_maniculatus_bairdii
ENSAMXG00000006495rpl1310090.995ENSPFOG00000013435rpl1310090.995Poecilia_formosa
ENSAMXG00000006495rpl1310090.995ENSPLAG00000004085rpl1310090.995Poecilia_latipinna
ENSAMXG00000006495rpl1310090.995ENSPMEG00000015599rpl1310090.995Poecilia_mexicana
ENSAMXG00000006495rpl1310091.469ENSPREG00000023190rpl1310091.469Poecilia_reticulata
ENSAMXG00000006495rpl1310083.886ENSPCAG00000015461RPL1310083.886Procavia_capensis
ENSAMXG00000006495rpl1310085.308ENSPCOG00000024647RPL1310085.308Propithecus_coquereli
ENSAMXG00000006495rpl1310082.938ENSPVAG00000015130RPL1310082.938Pteropus_vampyrus
ENSAMXG00000006495rpl1310090.047ENSPNYG00000013189rpl1310090.047Pundamilia_nyererei
ENSAMXG00000006495rpl1310092.891ENSPNAG00000002916rpl1310092.891Pygocentrus_nattereri
ENSAMXG00000006495rpl1310079.147ENSRNOG00000029227AABR07054469.110079.147Rattus_norvegicus
ENSAMXG00000006495rpl139978.571ENSRNOG00000059545AC114446.110076.887Rattus_norvegicus
ENSAMXG00000006495rpl1310082.938ENSRNOG00000061438LOC10036049110082.938Rattus_norvegicus
ENSAMXG00000006495rpl1310084.360ENSRNOG00000015335Rpl1310084.360Rattus_norvegicus
ENSAMXG00000006495rpl1310083.412ENSRNOG00000055911LOC10036125910083.412Rattus_norvegicus
ENSAMXG00000006495rpl139964.286ENSRBIG00000010434-8964.286Rhinopithecus_bieti
ENSAMXG00000006495rpl1310085.308ENSRBIG00000031937RPL1310085.308Rhinopithecus_bieti
ENSAMXG00000006495rpl139964.286ENSRROG00000025626-8964.286Rhinopithecus_roxellana
ENSAMXG00000006495rpl1310085.308ENSRROG00000036999-10085.308Rhinopithecus_roxellana
ENSAMXG00000006495rpl139247.692YDL082WRPL13A10049.057Saccharomyces_cerevisiae
ENSAMXG00000006495rpl139248.205YMR142CRPL13B10049.528Saccharomyces_cerevisiae
ENSAMXG00000006495rpl1310065.877ENSSBOG00000019618-10065.877Saimiri_boliviensis_boliviensis
ENSAMXG00000006495rpl1310084.834ENSSBOG00000028589-10084.834Saimiri_boliviensis_boliviensis
ENSAMXG00000006495rpl138154.971ENSSHAG00000010433-9954.971Sarcophilus_harrisii
ENSAMXG00000006495rpl1310091.469ENSSFOG00015019594rpl1310091.469Scleropages_formosus
ENSAMXG00000006495rpl1310088.152ENSSMAG00000021443rpl1310088.152Scophthalmus_maximus
ENSAMXG00000006495rpl1310089.573ENSSDUG00000001262rpl1310089.573Seriola_dumerili
ENSAMXG00000006495rpl139653.171ENSSLDG00000007067-9453.431Seriola_lalandi_dorsalis
ENSAMXG00000006495rpl1310089.573ENSSLDG00000021182rpl1310089.573Seriola_lalandi_dorsalis
ENSAMXG00000006495rpl137682.500ENSSPUG00000006904RPL138982.500Sphenodon_punctatus
ENSAMXG00000006495rpl1310089.573ENSSPAG00000020434rpl1310089.573Stegastes_partitus
ENSAMXG00000006495rpl139956.938ENSSSCG00000033294-9957.005Sus_scrofa
ENSAMXG00000006495rpl1310085.308ENSSSCG00000024974RPL1310085.308Sus_scrofa
ENSAMXG00000006495rpl1310061.611ENSSSCG00000036198-10061.611Sus_scrofa
ENSAMXG00000006495rpl139961.058ENSSSCG00000007813-9961.058Sus_scrofa
ENSAMXG00000006495rpl139964.286ENSSSCG00000003723-9964.286Sus_scrofa
ENSAMXG00000006495rpl139954.976ENSSSCG00000029020-9654.976Sus_scrofa
ENSAMXG00000006495rpl1310086.256ENSTGUG00000007874RPL1310086.256Taeniopygia_guttata
ENSAMXG00000006495rpl1310089.100ENSTRUG00000021170rpl1310089.100Takifugu_rubripes
ENSAMXG00000006495rpl1310090.047ENSTNIG00000009349rpl1310090.047Tetraodon_nigroviridis
ENSAMXG00000006495rpl1310085.308ENSTTRG00000004374RPL1310085.308Tursiops_truncatus
ENSAMXG00000006495rpl1310084.834ENSUAMG00000020363RPL1310084.834Ursus_americanus
ENSAMXG00000006495rpl136076.984ENSVPAG00000000569-10076.984Vicugna_pacos
ENSAMXG00000006495rpl139450.244ENSVVUG00000005779-9249.010Vulpes_vulpes
ENSAMXG00000006495rpl1310078.199ENSVVUG00000003839-10078.199Vulpes_vulpes
ENSAMXG00000006495rpl1310083.412ENSXETG00000019835rpl1310083.412Xenopus_tropicalis
ENSAMXG00000006495rpl1310090.521ENSXCOG00000011315rpl1310090.521Xiphophorus_couchianus
ENSAMXG00000006495rpl1310090.995ENSXMAG00000003221rpl1310090.995Xiphophorus_maculatus

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