EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000006546 (Gene tree)
Gene ID: 103030824
Gene Symbol: tsen54
Alias: zgc:109927
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 19834 bases
Position: chrAPWO02000061.1:202270-222103
Accession: 103030824
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000006722	tRNA_int_end_N2	PF12928.7	3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000006722	-	1536	XM_022666206	ENSAMXP00000006722	511 (aa)	XP_022521927	W5KGL0

Gene Model

Click here to download ENSAMXG00000006546's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000006546's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000006546	tsen54	96	46.654	ENSG00000182173	TSEN54	100	68.056	Homo_sapiens
ENSAMXG00000006546	tsen54	97	61.200	ENSAPOG00000009659	tsen54	99	59.135	Acanthochromis_polyacanthus
ENSAMXG00000006546	tsen54	96	46.680	ENSAMEG00000009414	TSEN54	96	46.680	Ailuropoda_melanoleuca
ENSAMXG00000006546	tsen54	97	60.843	ENSAOCG00000000152	tsen54	95	60.843	Amphiprion_ocellaris
ENSAMXG00000006546	tsen54	97	60.241	ENSAPEG00000018931	tsen54	95	60.241	Amphiprion_percula
ENSAMXG00000006546	tsen54	97	56.202	ENSATEG00000019860	tsen54	97	56.117	Anabas_testudineus
ENSAMXG00000006546	tsen54	85	50.661	ENSAPLG00000009419	TSEN54	99	50.661	Anas_platyrhynchos
ENSAMXG00000006546	tsen54	96	48.242	ENSACAG00000006714	TSEN54	97	48.047	Anolis_carolinensis
ENSAMXG00000006546	tsen54	96	45.698	ENSANAG00000024061	TSEN54	96	47.184	Aotus_nancymaae
ENSAMXG00000006546	tsen54	97	58.648	ENSACLG00000019800	tsen54	97	58.218	Astatotilapia_calliptera
ENSAMXG00000006546	tsen54	96	46.680	ENSBTAG00000000824	TSEN54	97	46.680	Bos_taurus
ENSAMXG00000006546	tsen54	96	45.698	ENSCJAG00000014278	TSEN54	96	46.990	Callithrix_jacchus
ENSAMXG00000006546	tsen54	96	46.498	ENSCAFG00000004798	TSEN54	97	46.304	Canis_familiaris
ENSAMXG00000006546	tsen54	96	46.498	ENSCAFG00020000312	TSEN54	97	46.304	Canis_lupus_dingo
ENSAMXG00000006546	tsen54	96	47.129	ENSCHIG00000019908	TSEN54	97	47.129	Capra_hircus
ENSAMXG00000006546	tsen54	85	45.175	ENSTSYG00000037439	TSEN54	99	45.833	Carlito_syrichta
ENSAMXG00000006546	tsen54	96	46.967	ENSCCAG00000036624	TSEN54	96	47.276	Cebus_capucinus
ENSAMXG00000006546	tsen54	96	47.554	ENSCATG00000042877	TSEN54	96	47.554	Cercocebus_atys
ENSAMXG00000006546	tsen54	96	47.070	ENSCLAG00000002924	TSEN54	96	47.070	Chinchilla_lanigera
ENSAMXG00000006546	tsen54	96	46.286	ENSCSAG00000004809	TSEN54	96	48.047	Chlorocebus_sabaeus
ENSAMXG00000006546	tsen54	97	48.473	ENSCPBG00000028071	TSEN54	98	48.654	Chrysemys_picta_bellii
ENSAMXG00000006546	tsen54	96	47.162	ENSCANG00000028053	TSEN54	96	47.162	Colobus_angolensis_palliatus
ENSAMXG00000006546	tsen54	96	46.602	ENSCGRG00001020029	Tsen54	97	46.602	Cricetulus_griseus_chok1gshd
ENSAMXG00000006546	tsen54	84	44.420	ENSCGRG00000016289	Tsen54	99	44.420	Cricetulus_griseus_crigri
ENSAMXG00000006546	tsen54	80	49.406	ENSCSEG00000020586	tsen54	99	49.406	Cynoglossus_semilaevis
ENSAMXG00000006546	tsen54	80	64.390	ENSDARG00000036844	tsen54	100	64.390	Danio_rerio
ENSAMXG00000006546	tsen54	96	46.911	ENSDNOG00000018452	TSEN54	97	47.287	Dasypus_novemcinctus
ENSAMXG00000006546	tsen54	96	47.244	ENSDORG00000004073	Tsen54	97	47.244	Dipodomys_ordii
ENSAMXG00000006546	tsen54	73	45.333	ENSEBUG00000005203	TSEN54	69	45.333	Eptatretus_burgeri
ENSAMXG00000006546	tsen54	96	47.379	ENSEASG00005000579	TSEN54	97	47.379	Equus_asinus_asinus
ENSAMXG00000006546	tsen54	96	47.379	ENSECAG00000004924	TSEN54	97	47.379	Equus_caballus
ENSAMXG00000006546	tsen54	85	44.035	ENSEEUG00000008467	TSEN54	99	43.573	Erinaceus_europaeus
ENSAMXG00000006546	tsen54	98	57.895	ENSELUG00000017703	tsen54	90	58.476	Esox_lucius
ENSAMXG00000006546	tsen54	78	64.706	ENSFCAG00000023712	TSEN54	97	47.308	Felis_catus
ENSAMXG00000006546	tsen54	93	50.102	ENSFALG00000001119	TSEN54	92	49.388	Ficedula_albicollis
ENSAMXG00000006546	tsen54	85	46.681	ENSFDAG00000019090	TSEN54	99	46.358	Fukomys_damarensis
ENSAMXG00000006546	tsen54	97	59.519	ENSFHEG00000005470	tsen54	97	59.519	Fundulus_heteroclitus
ENSAMXG00000006546	tsen54	85	59.341	ENSGMOG00000013146	tsen54	99	59.341	Gadus_morhua
ENSAMXG00000006546	tsen54	92	47.200	ENSGALG00000047163	TSEN54	96	47.295	Gallus_gallus
ENSAMXG00000006546	tsen54	97	58.384	ENSGAFG00000005111	tsen54	97	58.182	Gambusia_affinis
ENSAMXG00000006546	tsen54	96	53.507	ENSGACG00000014987	tsen54	99	52.988	Gasterosteus_aculeatus
ENSAMXG00000006546	tsen54	96	48.555	ENSGAGG00000006825	TSEN54	96	48.555	Gopherus_agassizii
ENSAMXG00000006546	tsen54	96	46.833	ENSGGOG00000009417	TSEN54	99	48.627	Gorilla_gorilla
ENSAMXG00000006546	tsen54	87	57.709	ENSHBUG00000018296	tsen54	98	50.370	Haplochromis_burtoni
ENSAMXG00000006546	tsen54	96	47.969	ENSHGLG00000007979	TSEN54	97	47.969	Heterocephalus_glaber_female
ENSAMXG00000006546	tsen54	96	47.002	ENSHGLG00100005497	TSEN54	97	47.002	Heterocephalus_glaber_male
ENSAMXG00000006546	tsen54	80	52.913	ENSHCOG00000007481	tsen54	99	52.913	Hippocampus_comes
ENSAMXG00000006546	tsen54	100	61.004	ENSIPUG00000000590	tsen54	97	62.028	Ictalurus_punctatus
ENSAMXG00000006546	tsen54	96	45.809	ENSSTOG00000012883	TSEN54	97	45.809	Ictidomys_tridecemlineatus
ENSAMXG00000006546	tsen54	96	48.054	ENSJJAG00000007365	Tsen54	97	48.054	Jaculus_jaculus
ENSAMXG00000006546	tsen54	97	56.783	ENSKMAG00000006944	tsen54	97	56.202	Kryptolebias_marmoratus
ENSAMXG00000006546	tsen54	97	56.311	ENSLBEG00000004199	tsen54	97	56.311	Labrus_bergylta
ENSAMXG00000006546	tsen54	96	43.462	ENSLACG00000009497	TSEN54	99	43.462	Latimeria_chalumnae
ENSAMXG00000006546	tsen54	100	55.179	ENSLOCG00000011191	tsen54	97	56.031	Lepisosteus_oculatus
ENSAMXG00000006546	tsen54	96	46.272	ENSMFAG00000000712	TSEN54	96	48.047	Macaca_fascicularis
ENSAMXG00000006546	tsen54	96	46.272	ENSMNEG00000029199	TSEN54	96	48.047	Macaca_nemestrina
ENSAMXG00000006546	tsen54	85	45.161	ENSMLEG00000044168	TSEN54	87	47.137	Mandrillus_leucophaeus
ENSAMXG00000006546	tsen54	97	59.920	ENSMAMG00000019773	tsen54	97	60.120	Mastacembelus_armatus
ENSAMXG00000006546	tsen54	97	58.250	ENSMZEG00005000884	tsen54	97	57.822	Maylandia_zebra
ENSAMXG00000006546	tsen54	99	45.403	ENSMGAG00000009556	TSEN54	97	46.641	Meleagris_gallopavo
ENSAMXG00000006546	tsen54	96	47.358	ENSMAUG00000016838	Tsen54	97	47.358	Mesocricetus_auratus
ENSAMXG00000006546	tsen54	96	48.000	ENSMICG00000044012	TSEN54	96	49.296	Microcebus_murinus
ENSAMXG00000006546	tsen54	96	47.758	ENSMOCG00000021585	Tsen54	97	47.758	Microtus_ochrogaster
ENSAMXG00000006546	tsen54	96	51.111	ENSMMOG00000020189	tsen54	99	52.323	Mola_mola
ENSAMXG00000006546	tsen54	96	45.594	ENSMODG00000007438	TSEN54	95	45.594	Monodelphis_domestica
ENSAMXG00000006546	tsen54	97	57.708	ENSMALG00000020573	tsen54	97	57.957	Monopterus_albus
ENSAMXG00000006546	tsen54	96	46.199	MGP_CAROLIEiJ_G0017417	Tsen54	97	46.199	Mus_caroli
ENSAMXG00000006546	tsen54	96	47.266	ENSMUSG00000020781	Tsen54	97	47.266	Mus_musculus
ENSAMXG00000006546	tsen54	96	47.266	MGP_PahariEiJ_G0018547	Tsen54	97	47.266	Mus_pahari
ENSAMXG00000006546	tsen54	96	47.070	MGP_SPRETEiJ_G0018262	Tsen54	97	47.070	Mus_spretus
ENSAMXG00000006546	tsen54	96	45.914	ENSMPUG00000013870	TSEN54	97	45.914	Mustela_putorius_furo
ENSAMXG00000006546	tsen54	96	47.177	ENSMLUG00000015298	TSEN54	96	46.976	Myotis_lucifugus
ENSAMXG00000006546	tsen54	96	47.173	ENSNGAG00000015673	Tsen54	97	47.173	Nannospalax_galili
ENSAMXG00000006546	tsen54	88	44.111	ENSMEUG00000011908	TSEN54	99	44.111	Notamacropus_eugenii
ENSAMXG00000006546	tsen54	96	43.800	ENSOPRG00000012513	TSEN54	96	43.800	Ochotona_princeps
ENSAMXG00000006546	tsen54	97	58.532	ENSONIG00000009543	tsen54	97	58.103	Oreochromis_niloticus
ENSAMXG00000006546	tsen54	96	43.870	ENSOCUG00000009875	TSEN54	97	43.678	Oryctolagus_cuniculus
ENSAMXG00000006546	tsen54	98	56.773	ENSORLG00000000852	tsen54	97	56.680	Oryzias_latipes
ENSAMXG00000006546	tsen54	98	56.175	ENSORLG00020018221	tsen54	97	56.275	Oryzias_latipes_hni
ENSAMXG00000006546	tsen54	98	56.574	ENSORLG00015009413	tsen54	98	56.478	Oryzias_latipes_hsok
ENSAMXG00000006546	tsen54	98	56.064	ENSOMEG00000014402	tsen54	94	56.478	Oryzias_melastigma
ENSAMXG00000006546	tsen54	96	44.356	ENSOGAG00000001442	TSEN54	96	44.379	Otolemur_garnettii
ENSAMXG00000006546	tsen54	85	43.267	ENSOARG00000010361	TSEN54	99	43.267	Ovis_aries
ENSAMXG00000006546	tsen54	94	46.774	ENSPPAG00000043519	TSEN54	99	47.992	Pan_paniscus
ENSAMXG00000006546	tsen54	78	65.294	ENSPPRG00000009162	TSEN54	97	47.308	Panthera_pardus
ENSAMXG00000006546	tsen54	85	45.714	ENSPTIG00000019312	TSEN54	96	46.374	Panthera_tigris_altaica
ENSAMXG00000006546	tsen54	96	46.845	ENSPTRG00000009646	TSEN54	96	48.633	Pan_troglodytes
ENSAMXG00000006546	tsen54	96	46.272	ENSPANG00000020133	TSEN54	96	48.047	Papio_anubis
ENSAMXG00000006546	tsen54	96	56.098	ENSPKIG00000023018	tsen54	99	56.835	Paramormyrops_kingsleyae
ENSAMXG00000006546	tsen54	80	46.853	ENSPSIG00000012807	TSEN54	100	46.853	Pelodiscus_sinensis
ENSAMXG00000006546	tsen54	93	43.271	ENSPMGG00000019578	tsen54	99	43.271	Periophthalmus_magnuspinnatus
ENSAMXG00000006546	tsen54	96	47.082	ENSPEMG00000014857	Tsen54	97	47.082	Peromyscus_maniculatus_bairdii
ENSAMXG00000006546	tsen54	97	58.717	ENSPFOG00000022740	tsen54	97	58.717	Poecilia_formosa
ENSAMXG00000006546	tsen54	97	58.384	ENSPLAG00000014847	tsen54	97	58.384	Poecilia_latipinna
ENSAMXG00000006546	tsen54	97	58.182	ENSPMEG00000022876	tsen54	97	58.182	Poecilia_mexicana
ENSAMXG00000006546	tsen54	97	58.266	ENSPREG00000013090	tsen54	97	57.863	Poecilia_reticulata
ENSAMXG00000006546	tsen54	90	46.581	ENSPPYG00000008629	TSEN54	99	47.009	Pongo_abelii
ENSAMXG00000006546	tsen54	92	41.141	ENSPCAG00000002093	TSEN54	96	41.837	Procavia_capensis
ENSAMXG00000006546	tsen54	96	45.889	ENSPCOG00000027880	TSEN54	97	47.451	Propithecus_coquereli
ENSAMXG00000006546	tsen54	96	47.184	ENSPVAG00000008446	TSEN54	97	47.184	Pteropus_vampyrus
ENSAMXG00000006546	tsen54	93	57.026	ENSPNYG00000010217	tsen54	99	56.592	Pundamilia_nyererei
ENSAMXG00000006546	tsen54	100	74.138	ENSPNAG00000003770	tsen54	100	74.138	Pygocentrus_nattereri
ENSAMXG00000006546	tsen54	96	47.750	ENSRNOG00000004598	Tsen54	97	47.750	Rattus_norvegicus
ENSAMXG00000006546	tsen54	96	47.162	ENSRBIG00000043040	TSEN54	96	47.162	Rhinopithecus_bieti
ENSAMXG00000006546	tsen54	96	47.162	ENSRROG00000030797	TSEN54	96	47.162	Rhinopithecus_roxellana
ENSAMXG00000006546	tsen54	96	43.702	ENSSBOG00000013543	TSEN54	96	43.883	Saimiri_boliviensis_boliviensis
ENSAMXG00000006546	tsen54	96	46.947	ENSSHAG00000018127	TSEN54	96	46.947	Sarcophilus_harrisii
ENSAMXG00000006546	tsen54	80	58.432	ENSSFOG00015004093	tsen54	99	58.670	Scleropages_formosus
ENSAMXG00000006546	tsen54	97	57.647	ENSSMAG00000012449	tsen54	98	57.059	Scophthalmus_maximus
ENSAMXG00000006546	tsen54	97	58.203	ENSSDUG00000021506	tsen54	97	58.203	Seriola_dumerili
ENSAMXG00000006546	tsen54	97	58.398	ENSSLDG00000016303	tsen54	97	58.398	Seriola_lalandi_dorsalis
ENSAMXG00000006546	tsen54	79	43.852	ENSSPUG00000008988	TSEN54	96	42.991	Sphenodon_punctatus
ENSAMXG00000006546	tsen54	80	53.957	ENSSPAG00000008047	tsen54	99	53.957	Stegastes_partitus
ENSAMXG00000006546	tsen54	93	58.506	ENSSPAG00000008098	-	99	58.506	Stegastes_partitus
ENSAMXG00000006546	tsen54	96	46.154	ENSSSCG00000036852	TSEN54	96	47.082	Sus_scrofa
ENSAMXG00000006546	tsen54	85	49.020	ENSTGUG00000008548	TSEN54	99	48.352	Taeniopygia_guttata
ENSAMXG00000006546	tsen54	97	57.374	ENSTRUG00000004230	tsen54	97	57.778	Takifugu_rubripes
ENSAMXG00000006546	tsen54	96	57.228	ENSTNIG00000011281	tsen54	97	57.199	Tetraodon_nigroviridis
ENSAMXG00000006546	tsen54	85	45.415	ENSTTRG00000015828	TSEN54	99	44.323	Tursiops_truncatus
ENSAMXG00000006546	tsen54	80	43.590	ENSUAMG00000010045	TSEN54	85	61.268	Ursus_americanus
ENSAMXG00000006546	tsen54	83	44.470	ENSUMAG00000008979	TSEN54	99	44.470	Ursus_maritimus
ENSAMXG00000006546	tsen54	77	65.455	ENSVVUG00000011411	TSEN54	97	46.562	Vulpes_vulpes
ENSAMXG00000006546	tsen54	96	46.800	ENSXETG00000012532	tsen54	99	64.167	Xenopus_tropicalis
ENSAMXG00000006546	tsen54	96	50.605	ENSXCOG00000018245	tsen54	99	54.436	Xiphophorus_couchianus
ENSAMXG00000006546	tsen54	97	58.586	ENSXMAG00000018818	tsen54	97	58.586	Xiphophorus_maculatus