EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAMXG00000006702 (Gene tree)
Gene ID
103044679
Gene Symbol
nova1
Alias
si:ch211-222c22.9
Full Name
RNA-binding protein Nova-1-like
Gene Type
protein_coding
Species
Astyanax_mexicanus
Status
putative
Strand
Minus strand
Length
43691 bases
Position
chr3:13620278-13663968
Accession
103044679
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAMXP00000006871KH_1PF00013.293.6e-4413
ENSAMXP00000006871KH_1PF00013.293.6e-4423
ENSAMXP00000006871KH_1PF00013.293.6e-4433
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAMXT00000006871-2148XM_007257470ENSAMXP00000006871486 (aa)XP_007257532W5KH09
Gene Model
Click here to download ENSAMXG00000006702's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000006702's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAMXG00000006702nova15040.845ENSAMXG00000037819pcbp29539.744
ENSAMXG00000006702nova18631.288ENSAMXG00000013588-9240.299
ENSAMXG00000006702nova15634.667ENSAMXG00000006660hnrpkl5837.500
ENSAMXG00000006702nova18732.558ENSAMXG00000003440pcbp36339.706
ENSAMXG00000006702nova15138.462ENSAMXG00000016858-7240.000
ENSAMXG00000006702nova110087.349ENSAMXG00000033604nova210087.149
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAMXG00000006702nova110080.368ENSG00000139910NOVA110088.991Homo_sapiens
ENSAMXG00000006702nova19892.857ENSAPOG00000002171nova19992.647Acanthochromis_polyacanthus
ENSAMXG00000006702nova19989.959ENSAPOG00000006189-10088.554Acanthochromis_polyacanthus
ENSAMXG00000006702nova110074.269ENSAMEG00000015330NOVA19774.074Ailuropoda_melanoleuca
ENSAMXG00000006702nova19090.182ENSACIG00000017818nova19878.132Amphilophus_citrinellus
ENSAMXG00000006702nova110088.755ENSACIG00000007544-10088.554Amphilophus_citrinellus
ENSAMXG00000006702nova19991.376ENSAOCG00000011292nova19989.243Amphiprion_ocellaris
ENSAMXG00000006702nova15197.183ENSAOCG00000013373-5797.183Amphiprion_ocellaris
ENSAMXG00000006702nova19892.857ENSAPEG00000012502nova19992.647Amphiprion_percula
ENSAMXG00000006702nova19990.456ENSAPEG00000016133-9290.249Amphiprion_percula
ENSAMXG00000006702nova110088.554ENSATEG00000006500NOVA110088.353Anabas_testudineus
ENSAMXG00000006702nova19177.828ENSATEG00000017565nova19977.828Anabas_testudineus
ENSAMXG00000006702nova19375.829ENSAPLG00000008154NOVA110075.592Anas_platyrhynchos
ENSAMXG00000006702nova19176.609ENSACAG00000000477NOVA19978.326Anolis_carolinensis
ENSAMXG00000006702nova19181.222ENSANAG00000028004NOVA19882.127Aotus_nancymaae
ENSAMXG00000006702nova110084.837ENSACLG00000018329-10084.645Astatotilapia_calliptera
ENSAMXG00000006702nova19991.511ENSACLG00000003002nova19988.668Astatotilapia_calliptera
ENSAMXG00000006702nova110080.164ENSBTAG00000002170NOVA110079.755Bos_taurus
ENSAMXG00000006702nova110080.164ENSCJAG00000039497NOVA110079.755Callithrix_jacchus
ENSAMXG00000006702nova110076.413ENSCAFG00000029157NOVA110076.218Canis_familiaris
ENSAMXG00000006702nova15076.250ENSCAFG00020024149-7576.250Canis_lupus_dingo
ENSAMXG00000006702nova110080.164ENSCHIG00000018944NOVA110079.755Capra_hircus
ENSAMXG00000006702nova19181.179ENSTSYG00000014033NOVA19976.077Carlito_syrichta
ENSAMXG00000006702nova19373.031ENSCAPG00000010512NOVA110072.792Cavia_aperea
ENSAMXG00000006702nova110076.608ENSCPOG00000030872NOVA110076.413Cavia_porcellus
ENSAMXG00000006702nova110080.164ENSCCAG00000026410NOVA110079.755Cebus_capucinus
ENSAMXG00000006702nova110080.164ENSCATG00000039944NOVA110079.755Cercocebus_atys
ENSAMXG00000006702nova19178.326ENSCLAG00000008948NOVA19978.112Chinchilla_lanigera
ENSAMXG00000006702nova110076.413ENSCSAG00000015814NOVA110076.218Chlorocebus_sabaeus
ENSAMXG00000006702nova110074.854ENSCHOG00000006617NOVA110074.659Choloepus_hoffmanni
ENSAMXG00000006702nova110080.164ENSCPBG00000027677NOVA110079.755Chrysemys_picta_bellii
ENSAMXG00000006702nova110079.959ENSCANG00000023898NOVA110079.550Colobus_angolensis_palliatus
ENSAMXG00000006702nova110076.413ENSCGRG00001024030Nova110076.218Cricetulus_griseus_chok1gshd
ENSAMXG00000006702nova19178.326ENSCGRG00000004816Nova19878.112Cricetulus_griseus_crigri
ENSAMXG00000006702nova19987.327ENSCSEG00000017718nova19887.129Cynoglossus_semilaevis
ENSAMXG00000006702nova110088.554ENSCSEG00000005887NOVA110088.353Cynoglossus_semilaevis
ENSAMXG00000006702nova19890.428ENSCVAG00000011460nova19988.340Cyprinodon_variegatus
ENSAMXG00000006702nova19782.128ENSCVAG00000014373-9979.149Cyprinodon_variegatus
ENSAMXG00000006702nova18689.049ENSCVAG00000014025NOVA19789.049Cyprinodon_variegatus
ENSAMXG00000006702nova110087.751ENSDARG00000017673nova210087.550Danio_rerio
ENSAMXG00000006702nova110092.742ENSDARG00000020178nova19998.052Danio_rerio
ENSAMXG00000006702nova19376.259ENSDNOG00000034618NOVA110076.019Dasypus_novemcinctus
ENSAMXG00000006702nova110076.413ENSDORG00000012633Nova110076.218Dipodomys_ordii
ENSAMXG00000006702nova19170.753ENSETEG00000002159NOVA110070.538Echinops_telfairi
ENSAMXG00000006702nova19661.284ENSEBUG00000016201NOVA19561.715Eptatretus_burgeri
ENSAMXG00000006702nova19867.546ENSEBUG00000008930NOVA19866.739Eptatretus_burgeri
ENSAMXG00000006702nova19375.321ENSEASG00005018649NOVA110075.064Equus_asinus_asinus
ENSAMXG00000006702nova110080.164ENSECAG00000037301NOVA110079.755Equus_caballus
ENSAMXG00000006702nova19878.286ENSEEUG00000013658NOVA18778.000Erinaceus_europaeus
ENSAMXG00000006702nova110084.646ENSELUG00000012346-10084.449Esox_lucius
ENSAMXG00000006702nova110089.336ENSELUG00000017375nova110089.135Esox_lucius
ENSAMXG00000006702nova110080.164ENSFCAG00000004226NOVA110079.755Felis_catus
ENSAMXG00000006702nova110076.413ENSFALG00000005703NOVA110076.218Ficedula_albicollis
ENSAMXG00000006702nova110075.244ENSFDAG00000007704NOVA110075.049Fukomys_damarensis
ENSAMXG00000006702nova110085.341ENSFHEG00000020456-10087.952Fundulus_heteroclitus
ENSAMXG00000006702nova110090.204ENSFHEG00000004626nova110090.000Fundulus_heteroclitus
ENSAMXG00000006702nova17191.525ENSGMOG00000019162-7691.525Gadus_morhua
ENSAMXG00000006702nova110091.296ENSGMOG00000011253nova110091.093Gadus_morhua
ENSAMXG00000006702nova110080.164ENSGALG00000009850NOVA110079.755Gallus_gallus
ENSAMXG00000006702nova19885.861ENSGAFG00000003656-10085.861Gambusia_affinis
ENSAMXG00000006702nova19793.008ENSGAFG00000016382nova19692.797Gambusia_affinis
ENSAMXG00000006702nova19893.067ENSGACG00000020175nova19592.857Gasterosteus_aculeatus
ENSAMXG00000006702nova19585.412ENSGACG00000012628-9985.201Gasterosteus_aculeatus
ENSAMXG00000006702nova18878.635ENSGAGG00000007839NOVA19580.119Gopherus_agassizii
ENSAMXG00000006702nova110080.164ENSGGOG00000016495NOVA110079.755Gorilla_gorilla
ENSAMXG00000006702nova19991.511ENSHBUG00000018561nova19992.227Haplochromis_burtoni
ENSAMXG00000006702nova110084.837ENSHBUG00000002485NOVA110084.645Haplochromis_burtoni
ENSAMXG00000006702nova110080.164ENSHGLG00000003180NOVA110079.755Heterocephalus_glaber_female
ENSAMXG00000006702nova19376.316ENSHGLG00100000791NOVA19076.077Heterocephalus_glaber_male
ENSAMXG00000006702nova110087.751ENSHCOG00000019136-10087.550Hippocampus_comes
ENSAMXG00000006702nova19992.116ENSHCOG00000008366nova19793.008Hippocampus_comes
ENSAMXG00000006702nova19987.928ENSIPUG00000019551nova210083.112Ictalurus_punctatus
ENSAMXG00000006702nova110090.392ENSIPUG00000018651nova110090.196Ictalurus_punctatus
ENSAMXG00000006702nova19178.326ENSSTOG00000020788NOVA19978.112Ictidomys_tridecemlineatus
ENSAMXG00000006702nova110076.413ENSJJAG00000012915Nova110076.218Jaculus_jaculus
ENSAMXG00000006702nova15394.393ENSKMAG00000006068-7794.393Kryptolebias_marmoratus
ENSAMXG00000006702nova15397.753ENSKMAG00000015047-9297.753Kryptolebias_marmoratus
ENSAMXG00000006702nova110088.531ENSKMAG00000014225nova19988.330Kryptolebias_marmoratus
ENSAMXG00000006702nova110088.554ENSLBEG00000003511NOVA110088.353Labrus_bergylta
ENSAMXG00000006702nova19988.623ENSLBEG00000028542nova19988.423Labrus_bergylta
ENSAMXG00000006702nova19376.247ENSLACG00000005669NOVA19976.960Latimeria_chalumnae
ENSAMXG00000006702nova110085.455ENSLACG00000015223nova29985.455Latimeria_chalumnae
ENSAMXG00000006702nova110071.735ENSLOCG00000009727NOVA110074.873Lepisosteus_oculatus
ENSAMXG00000006702nova110088.153ENSLOCG00000014804nova29987.952Lepisosteus_oculatus
ENSAMXG00000006702nova110076.413ENSLAFG00000006455NOVA110080.311Loxodonta_africana
ENSAMXG00000006702nova110080.164ENSMFAG00000035425NOVA110079.755Macaca_fascicularis
ENSAMXG00000006702nova110076.413ENSMMUG00000004271NOVA110076.218Macaca_mulatta
ENSAMXG00000006702nova110080.164ENSMNEG00000040302NOVA110079.755Macaca_nemestrina
ENSAMXG00000006702nova19181.179ENSMLEG00000034714NOVA110082.086Mandrillus_leucophaeus
ENSAMXG00000006702nova19990.760ENSMAMG00000021272nova19988.822Mastacembelus_armatus
ENSAMXG00000006702nova110088.554ENSMAMG00000016281NOVA110088.353Mastacembelus_armatus
ENSAMXG00000006702nova19991.511ENSMZEG00005023362nova19988.668Maylandia_zebra
ENSAMXG00000006702nova110084.837ENSMZEG00005024407-10084.645Maylandia_zebra
ENSAMXG00000006702nova19376.010ENSMGAG00000012359NOVA110075.772Meleagris_gallopavo
ENSAMXG00000006702nova110080.164ENSMICG00000034677NOVA110079.755Microcebus_murinus
ENSAMXG00000006702nova110076.413ENSMOCG00000006277Nova110076.218Microtus_ochrogaster
ENSAMXG00000006702nova19890.776ENSMMOG00000005092-9490.566Mola_mola
ENSAMXG00000006702nova19985.192ENSMMOG00000006066nova19985.000Mola_mola
ENSAMXG00000006702nova19178.326ENSMODG00000001830NOVA19578.112Monodelphis_domestica
ENSAMXG00000006702nova15081.595ENSMALG00000010422-8681.595Monopterus_albus
ENSAMXG00000006702nova19987.654ENSMALG00000005081nova19187.654Monopterus_albus
ENSAMXG00000006702nova15193.421ENSMALG00000010432-6794.030Monopterus_albus
ENSAMXG00000006702nova110076.218MGP_CAROLIEiJ_G0017728Nova110076.023Mus_caroli
ENSAMXG00000006702nova110076.218ENSMUSG00000021047Nova110076.023Mus_musculus
ENSAMXG00000006702nova110076.218MGP_PahariEiJ_G0029485Nova110076.023Mus_pahari
ENSAMXG00000006702nova110076.218MGP_SPRETEiJ_G0018570Nova110076.023Mus_spretus
ENSAMXG00000006702nova110076.413ENSMPUG00000005462NOVA110076.218Mustela_putorius_furo
ENSAMXG00000006702nova19375.772ENSMLUG00000016716NOVA110075.534Myotis_lucifugus
ENSAMXG00000006702nova19178.280ENSNGAG00000023231Nova110078.280Nannospalax_galili
ENSAMXG00000006702nova19991.511ENSNBRG00000008100nova19988.668Neolamprologus_brichardi
ENSAMXG00000006702nova110080.164ENSNLEG00000033958NOVA110079.755Nomascus_leucogenys
ENSAMXG00000006702nova19767.611ENSMEUG00000009112NOVA19867.409Notamacropus_eugenii
ENSAMXG00000006702nova16977.778ENSOPRG00000007199-6576.577Ochotona_princeps
ENSAMXG00000006702nova19376.316ENSODEG00000001059NOVA110078.065Octodon_degus
ENSAMXG00000006702nova19887.824ENSONIG00000015810nova19887.625Oreochromis_niloticus
ENSAMXG00000006702nova110088.577ENSONIG00000007665NOVA110088.377Oreochromis_niloticus
ENSAMXG00000006702nova18772.237ENSOANG00000014015NOVA110074.124Ornithorhynchus_anatinus
ENSAMXG00000006702nova110076.413ENSOCUG00000017622NOVA110076.218Oryctolagus_cuniculus
ENSAMXG00000006702nova110084.913ENSORLG00000027761-10084.913Oryzias_latipes
ENSAMXG00000006702nova19989.293ENSORLG00000000350nova19889.091Oryzias_latipes
ENSAMXG00000006702nova19891.458ENSORLG00020004573nova19891.250Oryzias_latipes_hni
ENSAMXG00000006702nova110085.409ENSORLG00020019124-10085.409Oryzias_latipes_hni
ENSAMXG00000006702nova110086.078ENSORLG00015007890-10086.078Oryzias_latipes_hsok
ENSAMXG00000006702nova19990.909ENSORLG00015000650nova19990.702Oryzias_latipes_hsok
ENSAMXG00000006702nova19891.807ENSOMEG00000015479nova19791.597Oryzias_melastigma
ENSAMXG00000006702nova110088.554ENSOMEG00000022949-10088.353Oryzias_melastigma
ENSAMXG00000006702nova19976.367ENSOGAG00000025938NOVA110076.172Otolemur_garnettii
ENSAMXG00000006702nova19178.326ENSOARG00000004870NOVA19878.112Ovis_aries
ENSAMXG00000006702nova19182.579ENSPPAG00000038980NOVA19882.127Pan_paniscus
ENSAMXG00000006702nova110080.164ENSPPRG00000015429NOVA110079.755Panthera_pardus
ENSAMXG00000006702nova19181.179ENSPTIG00000009518NOVA19082.086Panthera_tigris_altaica
ENSAMXG00000006702nova110080.164ENSPTRG00000006229NOVA110079.755Pan_troglodytes
ENSAMXG00000006702nova110080.164ENSPANG00000004891NOVA110079.755Papio_anubis
ENSAMXG00000006702nova110074.747ENSPKIG00000001428NOVA110080.164Paramormyrops_kingsleyae
ENSAMXG00000006702nova110088.153ENSPKIG00000005431nova29987.952Paramormyrops_kingsleyae
ENSAMXG00000006702nova19178.326ENSPSIG00000007132NOVA19978.112Pelodiscus_sinensis
ENSAMXG00000006702nova19990.141ENSPMGG00000005975nova19989.940Periophthalmus_magnuspinnatus
ENSAMXG00000006702nova110087.849ENSPMGG00000009801-10087.649Periophthalmus_magnuspinnatus
ENSAMXG00000006702nova110076.413ENSPEMG00000006503Nova110076.218Peromyscus_maniculatus_bairdii
ENSAMXG00000006702nova19375.321ENSPCIG00000024683NOVA110075.064Phascolarctos_cinereus
ENSAMXG00000006702nova110086.373ENSPFOG00000016392-10086.172Poecilia_formosa
ENSAMXG00000006702nova19193.694ENSPFOG00000018009nova19993.468Poecilia_formosa
ENSAMXG00000006702nova19991.546ENSPLAG00000015391nova19891.340Poecilia_latipinna
ENSAMXG00000006702nova110084.778ENSPLAG00000003504-10084.778Poecilia_latipinna
ENSAMXG00000006702nova19991.892ENSPMEG00000016376nova19991.684Poecilia_mexicana
ENSAMXG00000006702nova110084.778ENSPMEG00000019140-10084.778Poecilia_mexicana
ENSAMXG00000006702nova19793.008ENSPREG00000011614nova19989.474Poecilia_reticulata
ENSAMXG00000006702nova110084.586ENSPREG00000018946-10084.586Poecilia_reticulata
ENSAMXG00000006702nova110076.413ENSPPYG00000005714NOVA110076.218Pongo_abelii
ENSAMXG00000006702nova110062.183ENSPCAG00000010303NOVA110063.548Procavia_capensis
ENSAMXG00000006702nova19580.415ENSPCOG00000016857NOVA110080.119Propithecus_coquereli
ENSAMXG00000006702nova110075.828ENSPVAG00000002564NOVA110075.634Pteropus_vampyrus
ENSAMXG00000006702nova19694.004ENSPNYG00000015521nova19192.227Pundamilia_nyererei
ENSAMXG00000006702nova110084.837ENSPNYG00000022283-10084.645Pundamilia_nyererei
ENSAMXG00000006702nova110087.751ENSPNAG00000009171nova210087.550Pygocentrus_nattereri
ENSAMXG00000006702nova110097.183ENSPNAG00000024351nova110097.183Pygocentrus_nattereri
ENSAMXG00000006702nova19979.918ENSRNOG00000031440Nova110079.508Rattus_norvegicus
ENSAMXG00000006702nova19182.579ENSRBIG00000026331NOVA19882.127Rhinopithecus_bieti
ENSAMXG00000006702nova19181.179ENSRROG00000040203NOVA110082.086Rhinopithecus_roxellana
ENSAMXG00000006702nova19682.796ENSSBOG00000034029NOVA19982.366Saimiri_boliviensis_boliviensis
ENSAMXG00000006702nova19376.010ENSSHAG00000004907NOVA110075.772Sarcophilus_harrisii
ENSAMXG00000006702nova15075.000ENSSFOG00015010887NOVA16875.000Scleropages_formosus
ENSAMXG00000006702nova16293.827ENSSFOG00015010909-7993.827Scleropages_formosus
ENSAMXG00000006702nova110083.838ENSSFOG00015004204nova210084.444Scleropages_formosus
ENSAMXG00000006702nova110089.820ENSSMAG00000006485nova17289.621Scophthalmus_maximus
ENSAMXG00000006702nova19989.549ENSSMAG00000020189-10088.153Scophthalmus_maximus
ENSAMXG00000006702nova19793.235ENSSDUG00000020704nova19993.023Seriola_dumerili
ENSAMXG00000006702nova110087.302ENSSDUG00000001795-10087.103Seriola_dumerili
ENSAMXG00000006702nova110088.554ENSSLDG00000003193-10088.353Seriola_lalandi_dorsalis
ENSAMXG00000006702nova19793.263ENSSLDG00000006713nova19893.053Seriola_lalandi_dorsalis
ENSAMXG00000006702nova19178.280ENSSARG00000002599NOVA110078.065Sorex_araneus
ENSAMXG00000006702nova19375.321ENSSPUG00000006539NOVA110075.064Sphenodon_punctatus
ENSAMXG00000006702nova19991.581ENSSPAG00000001033nova19989.442Stegastes_partitus
ENSAMXG00000006702nova110088.755ENSSPAG00000008284NOVA110084.645Stegastes_partitus
ENSAMXG00000006702nova110080.164ENSSSCG00000024396NOVA110079.755Sus_scrofa
ENSAMXG00000006702nova110076.413ENSTGUG00000011799NOVA110076.218Taeniopygia_guttata
ENSAMXG00000006702nova110084.261ENSTRUG00000016275-10084.261Takifugu_rubripes
ENSAMXG00000006702nova19792.373ENSTNIG00000011634nova19992.161Tetraodon_nigroviridis
ENSAMXG00000006702nova18790.351ENSTNIG00000018993NOVA19890.351Tetraodon_nigroviridis
ENSAMXG00000006702nova110077.255ENSTBEG00000009774NOVA110077.059Tupaia_belangeri
ENSAMXG00000006702nova19369.032ENSTTRG00000006010NOVA110068.817Tursiops_truncatus
ENSAMXG00000006702nova110080.164ENSUAMG00000025822NOVA110079.755Ursus_americanus
ENSAMXG00000006702nova19375.321ENSUMAG00000023125NOVA110075.064Ursus_maritimus
ENSAMXG00000006702nova110076.413ENSVPAG00000007807NOVA110076.218Vicugna_pacos
ENSAMXG00000006702nova19181.222ENSVVUG00000029367NOVA19882.127Vulpes_vulpes
ENSAMXG00000006702nova110076.758ENSXETG00000010244nova110077.344Xenopus_tropicalis
ENSAMXG00000006702nova110086.957ENSXCOG00000009738NOVA110086.759Xiphophorus_couchianus
ENSAMXG00000006702nova19892.437ENSXMAG00000017880nova19987.968Xiphophorus_maculatus
ENSAMXG00000006702nova110088.554ENSXMAG00000013130-10088.353Xiphophorus_maculatus

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