EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000006805 (Gene tree)
Gene ID: 103024200
Gene Symbol: larp1b
Alias: fc76b04|wu:fc76b04
Full Name: la-related protein 1B-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 71577 bases
Position: chr9:12189179-12260755
Accession: 103024200
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000006993	La	PF05383.17	2.5e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000006993	-	3051	XM_022672716	ENSAMXP00000006993	1016 (aa)	XP_022528437	W5KHD1

Gene Model

Click here to download ENSAMXG00000006805's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000006805's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000006805	larp1b	85	51.199	ENSAMXG00000000859	larp1	70	55.277

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000006805	larp1b	89	50.681	ENSG00000138709	LARP1B	100	50.242	Homo_sapiens
ENSAMXG00000006805	larp1b	90	61.687	ENSAPOG00000020101	larp1b	99	57.061	Acanthochromis_polyacanthus
ENSAMXG00000006805	larp1b	52	50.859	ENSAMEG00000002748	LARP1B	74	59.545	Ailuropoda_melanoleuca
ENSAMXG00000006805	larp1b	90	59.631	ENSACIG00000023890	larp1b	99	55.502	Amphilophus_citrinellus
ENSAMXG00000006805	larp1b	83	58.674	ENSAOCG00000014268	larp1b	98	57.017	Amphiprion_ocellaris
ENSAMXG00000006805	larp1b	96	59.192	ENSAPEG00000004126	larp1b	99	56.870	Amphiprion_percula
ENSAMXG00000006805	larp1b	89	61.146	ENSATEG00000017849	larp1b	93	58.722	Anabas_testudineus
ENSAMXG00000006805	larp1b	69	54.685	ENSAPLG00000010129	LARP1B	82	53.636	Anas_platyrhynchos
ENSAMXG00000006805	larp1b	81	51.962	ENSACAG00000011338	LARP1B	93	47.890	Anolis_carolinensis
ENSAMXG00000006805	larp1b	75	50.739	ENSANAG00000034618	LARP1B	84	51.756	Aotus_nancymaae
ENSAMXG00000006805	larp1b	88	57.115	ENSACLG00000011948	larp1b	89	60.949	Astatotilapia_calliptera
ENSAMXG00000006805	larp1b	87	51.789	ENSBTAG00000012135	LARP1B	89	50.292	Bos_taurus
ENSAMXG00000006805	larp1b	81	53.312	ENSCJAG00000003338	LARP1B	84	59.239	Callithrix_jacchus
ENSAMXG00000006805	larp1b	81	57.388	ENSCAFG00000003831	LARP1B	99	55.156	Canis_familiaris
ENSAMXG00000006805	larp1b	85	53.112	ENSCAFG00020018899	LARP1B	98	52.013	Canis_lupus_dingo
ENSAMXG00000006805	larp1b	83	53.033	ENSCHIG00000023144	LARP1B	97	54.730	Capra_hircus
ENSAMXG00000006805	larp1b	81	53.198	ENSCCAG00000021948	LARP1B	83	57.534	Cebus_capucinus
ENSAMXG00000006805	larp1b	83	51.477	ENSCATG00000013541	LARP1B	84	54.847	Cercocebus_atys
ENSAMXG00000006805	larp1b	83	52.156	ENSCSAG00000003582	LARP1B	84	55.501	Chlorocebus_sabaeus
ENSAMXG00000006805	larp1b	83	51.389	ENSCHOG00000005354	LARP1B	85	56.147	Choloepus_hoffmanni
ENSAMXG00000006805	larp1b	86	52.165	ENSCPBG00000017480	LARP1B	70	57.687	Chrysemys_picta_bellii
ENSAMXG00000006805	larp1b	83	53.312	ENSCANG00000026958	LARP1B	98	55.150	Colobus_angolensis_palliatus
ENSAMXG00000006805	larp1b	90	54.432	ENSCSEG00000013519	larp1b	86	62.772	Cynoglossus_semilaevis
ENSAMXG00000006805	larp1b	86	60.377	ENSCVAG00000005046	larp1b	93	56.114	Cyprinodon_variegatus
ENSAMXG00000006805	larp1b	97	69.082	ENSDARG00000061169	larp1b	95	69.515	Danio_rerio
ENSAMXG00000006805	larp1b	50	49.365	ENSDNOG00000018765	-	74	58.680	Dasypus_novemcinctus
ENSAMXG00000006805	larp1b	63	54.225	ENSETEG00000012497	LARP1B	71	55.051	Echinops_telfairi
ENSAMXG00000006805	larp1b	84	43.068	ENSEBUG00000003668	larp1b	71	49.398	Eptatretus_burgeri
ENSAMXG00000006805	larp1b	81	53.837	ENSEASG00005018106	LARP1B	98	53.488	Equus_asinus_asinus
ENSAMXG00000006805	larp1b	86	52.266	ENSECAG00000001088	LARP1B	85	51.120	Equus_caballus
ENSAMXG00000006805	larp1b	68	57.263	ENSELUG00000023774	larp1b	90	57.504	Esox_lucius
ENSAMXG00000006805	larp1b	83	50.104	ENSFALG00000008098	LARP1B	85	52.052	Ficedula_albicollis
ENSAMXG00000006805	larp1b	94	60.417	ENSFHEG00000010264	larp1b	91	59.384	Fundulus_heteroclitus
ENSAMXG00000006805	larp1b	78	63.230	ENSGMOG00000005207	larp1b	77	56.877	Gadus_morhua
ENSAMXG00000006805	larp1b	87	48.141	ENSGALG00000010207	LARP1B	71	55.000	Gallus_gallus
ENSAMXG00000006805	larp1b	79	65.199	ENSGAFG00000012012	larp1b	91	60.338	Gambusia_affinis
ENSAMXG00000006805	larp1b	91	51.434	ENSGACG00000004609	larp1b	93	53.314	Gasterosteus_aculeatus
ENSAMXG00000006805	larp1b	71	58.302	ENSGAGG00000017209	LARP1B	71	53.409	Gopherus_agassizii
ENSAMXG00000006805	larp1b	83	52.055	ENSGGOG00000015900	LARP1B	84	56.005	Gorilla_gorilla
ENSAMXG00000006805	larp1b	86	62.270	ENSHBUG00000009730	larp1b	91	58.938	Haplochromis_burtoni
ENSAMXG00000006805	larp1b	65	64.407	ENSHCOG00000000918	larp1b	97	62.853	Hippocampus_comes
ENSAMXG00000006805	larp1b	96	72.374	ENSIPUG00000012138	larp1b	94	72.249	Ictalurus_punctatus
ENSAMXG00000006805	larp1b	87	60.426	ENSKMAG00000011589	larp1b	91	60.512	Kryptolebias_marmoratus
ENSAMXG00000006805	larp1b	90	66.358	ENSLBEG00000005655	larp1b	98	55.398	Labrus_bergylta
ENSAMXG00000006805	larp1b	91	53.366	ENSLACG00000015247	LARP1B	99	43.765	Latimeria_chalumnae
ENSAMXG00000006805	larp1b	73	61.736	ENSLOCG00000010684	larp1b	88	55.291	Lepisosteus_oculatus
ENSAMXG00000006805	larp1b	83	52.532	ENSMFAG00000002218	LARP1B	84	56.074	Macaca_fascicularis
ENSAMXG00000006805	larp1b	83	52.532	ENSMMUG00000021347	LARP1B	84	56.074	Macaca_mulatta
ENSAMXG00000006805	larp1b	83	50.055	ENSMNEG00000030406	LARP1B	81	55.878	Macaca_nemestrina
ENSAMXG00000006805	larp1b	83	53.066	ENSMLEG00000009306	LARP1B	99	51.163	Mandrillus_leucophaeus
ENSAMXG00000006805	larp1b	91	64.153	ENSMAMG00000000081	larp1b	94	59.305	Mastacembelus_armatus
ENSAMXG00000006805	larp1b	69	65.369	ENSMZEG00005002545	larp1b	100	59.929	Maylandia_zebra
ENSAMXG00000006805	larp1b	79	52.796	ENSMGAG00000004809	LARP1B	81	48.353	Meleagris_gallopavo
ENSAMXG00000006805	larp1b	83	54.362	ENSMICG00000036111	LARP1B	85	58.168	Microcebus_murinus
ENSAMXG00000006805	larp1b	87	50.911	ENSMODG00000012300	LARP1B	90	49.952	Monodelphis_domestica
ENSAMXG00000006805	larp1b	92	60.671	ENSMALG00000003638	larp1b	94	56.944	Monopterus_albus
ENSAMXG00000006805	larp1b	82	54.458	ENSMPUG00000017365	LARP1B	66	58.739	Mustela_putorius_furo
ENSAMXG00000006805	larp1b	81	52.991	ENSMLUG00000010229	LARP1B	80	58.018	Myotis_lucifugus
ENSAMXG00000006805	larp1b	78	65.049	ENSNBRG00000023846	larp1b	91	59.634	Neolamprologus_brichardi
ENSAMXG00000006805	larp1b	83	52.050	ENSNLEG00000013819	LARP1B	85	56.112	Nomascus_leucogenys
ENSAMXG00000006805	larp1b	64	54.444	ENSMEUG00000010308	LARP1B	76	53.194	Notamacropus_eugenii
ENSAMXG00000006805	larp1b	63	64.734	ENSOPRG00000005478	LARP1B	77	65.816	Ochotona_princeps
ENSAMXG00000006805	larp1b	84	56.061	ENSONIG00000012386	larp1b	92	61.469	Oreochromis_niloticus
ENSAMXG00000006805	larp1b	82	51.217	ENSOCUG00000013330	LARP1B	85	55.043	Oryctolagus_cuniculus
ENSAMXG00000006805	larp1b	90	57.673	ENSORLG00000017954	larp1b	92	57.041	Oryzias_latipes
ENSAMXG00000006805	larp1b	92	52.717	ENSORLG00020013081	larp1b	96	53.377	Oryzias_latipes_hni
ENSAMXG00000006805	larp1b	90	58.223	ENSORLG00015009580	larp1b	94	56.929	Oryzias_latipes_hsok
ENSAMXG00000006805	larp1b	89	60.125	ENSOMEG00000004210	larp1b	93	58.460	Oryzias_melastigma
ENSAMXG00000006805	larp1b	81	54.426	ENSOGAG00000005771	LARP1B	100	52.318	Otolemur_garnettii
ENSAMXG00000006805	larp1b	81	52.778	ENSOARG00000015300	LARP1B	85	55.990	Ovis_aries
ENSAMXG00000006805	larp1b	81	52.508	ENSPPAG00000030439	LARP1B	84	56.127	Pan_paniscus
ENSAMXG00000006805	larp1b	81	52.508	ENSPTRG00000016437	LARP1B	84	56.005	Pan_troglodytes
ENSAMXG00000006805	larp1b	83	52.532	ENSPANG00000012488	LARP1B	84	56.074	Papio_anubis
ENSAMXG00000006805	larp1b	87	51.323	ENSPKIG00000014360	larp1b	98	50.636	Paramormyrops_kingsleyae
ENSAMXG00000006805	larp1b	83	53.209	ENSPSIG00000012885	LARP1B	79	54.005	Pelodiscus_sinensis
ENSAMXG00000006805	larp1b	75	60.621	ENSPMGG00000007207	larp1b	89	61.030	Periophthalmus_magnuspinnatus
ENSAMXG00000006805	larp1b	62	53.056	ENSPMAG00000002700	larp1b	75	48.545	Petromyzon_marinus
ENSAMXG00000006805	larp1b	83	52.746	ENSPCIG00000026516	LARP1B	97	57.143	Phascolarctos_cinereus
ENSAMXG00000006805	larp1b	56	52.221	ENSPFOG00000022837	-	77	61.425	Poecilia_formosa
ENSAMXG00000006805	larp1b	92	56.308	ENSPFOG00000019519	larp1b	80	62.953	Poecilia_formosa
ENSAMXG00000006805	larp1b	92	57.740	ENSPLAG00000007115	larp1b	84	60.988	Poecilia_latipinna
ENSAMXG00000006805	larp1b	92	60.606	ENSPMEG00000001224	larp1b	87	61.075	Poecilia_mexicana
ENSAMXG00000006805	larp1b	82	52.081	ENSPCAG00000007546	LARP1B	98	50.158	Procavia_capensis
ENSAMXG00000006805	larp1b	81	46.409	ENSPCOG00000021874	LARP1B	74	56.763	Propithecus_coquereli
ENSAMXG00000006805	larp1b	82	49.786	ENSPVAG00000005373	LARP1B	84	52.684	Pteropus_vampyrus
ENSAMXG00000006805	larp1b	69	65.040	ENSPNYG00000017357	larp1b	100	59.255	Pundamilia_nyererei
ENSAMXG00000006805	larp1b	100	77.364	ENSPNAG00000008823	larp1b	100	74.368	Pygocentrus_nattereri
ENSAMXG00000006805	larp1b	83	52.215	ENSRROG00000030771	LARP1B	84	56.074	Rhinopithecus_roxellana
ENSAMXG00000006805	larp1b	61	50.143	ENSSHAG00000014474	LARP1B	99	48.494	Sarcophilus_harrisii
ENSAMXG00000006805	larp1b	82	62.914	ENSSMAG00000006347	larp1b	97	59.336	Scophthalmus_maximus
ENSAMXG00000006805	larp1b	86	64.147	ENSSDUG00000004182	larp1b	92	61.382	Seriola_dumerili
ENSAMXG00000006805	larp1b	86	57.454	ENSSLDG00000014613	larp1b	92	66.154	Seriola_lalandi_dorsalis
ENSAMXG00000006805	larp1b	75	56.020	ENSSPUG00000011837	LARP1B	84	55.937	Sphenodon_punctatus
ENSAMXG00000006805	larp1b	86	60.311	ENSSPAG00000017772	larp1b	99	55.751	Stegastes_partitus
ENSAMXG00000006805	larp1b	57	85.556	ENSSSCG00000034280	LARP1B	98	85.556	Sus_scrofa
ENSAMXG00000006805	larp1b	73	55.031	ENSTGUG00000002098	-	91	51.241	Taeniopygia_guttata
ENSAMXG00000006805	larp1b	88	61.017	ENSTRUG00000005612	larp1b	95	57.472	Takifugu_rubripes
ENSAMXG00000006805	larp1b	84	62.291	ENSTNIG00000012398	larp1b	97	60.284	Tetraodon_nigroviridis
ENSAMXG00000006805	larp1b	61	46.505	ENSTBEG00000004177	LARP1B	74	46.871	Tupaia_belangeri
ENSAMXG00000006805	larp1b	72	54.534	ENSTTRG00000012984	LARP1B	84	52.142	Tursiops_truncatus
ENSAMXG00000006805	larp1b	85	52.758	ENSUMAG00000007373	LARP1B	85	56.691	Ursus_maritimus
ENSAMXG00000006805	larp1b	61	56.719	ENSVPAG00000007223	LARP1B	72	55.357	Vicugna_pacos
ENSAMXG00000006805	larp1b	85	53.694	ENSVVUG00000011307	LARP1B	84	57.950	Vulpes_vulpes
ENSAMXG00000006805	larp1b	85	50.105	ENSXETG00000022512	larp1b	93	48.697	Xenopus_tropicalis
ENSAMXG00000006805	larp1b	62	64.179	ENSXCOG00000004435	larp1b	73	57.698	Xiphophorus_couchianus
ENSAMXG00000006805	larp1b	88	61.013	ENSXMAG00000008150	larp1b	92	56.863	Xiphophorus_maculatus