EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000006843 (Gene tree)
Gene ID: 103026989
Gene Symbol: nop16
Alias: zgc:92910
Full Name: NOP16 nucleolar protein
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 5054 bases
Position: chr14:17255832-17260885
Accession: 103026989
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000007033	Nop16	PF09420.10	4.3e-20	1	2
ENSAMXP00000007033	Nop16	PF09420.10	4.3e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000007033	-	519	XM_007244426	ENSAMXP00000007033	172 (aa)	XP_007244488	W5KHH1

Gene Model

Click here to download ENSAMXG00000006843's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000006843's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000006843	nop16	95	53.614	ENSAPOG00000010682	-	94	53.939	Acanthochromis_polyacanthus
ENSAMXG00000006843	nop16	95	44.910	ENSAMEG00000006988	-	94	44.910	Ailuropoda_melanoleuca
ENSAMXG00000006843	nop16	95	57.669	ENSACIG00000019263	nop16	94	57.669	Amphilophus_citrinellus
ENSAMXG00000006843	nop16	95	54.217	ENSAOCG00000005504	nop16	94	54.545	Amphiprion_ocellaris
ENSAMXG00000006843	nop16	95	54.217	ENSAPEG00000006605	nop16	94	54.545	Amphiprion_percula
ENSAMXG00000006843	nop16	90	55.414	ENSATEG00000014089	nop16	93	53.939	Anabas_testudineus
ENSAMXG00000006843	nop16	97	48.824	ENSACAG00000006333	-	96	48.824	Anolis_carolinensis
ENSAMXG00000006843	nop16	95	39.521	ENSANAG00000027410	-	78	41.844	Aotus_nancymaae
ENSAMXG00000006843	nop16	95	41.916	ENSANAG00000015743	-	94	41.916	Aotus_nancymaae
ENSAMXG00000006843	nop16	95	58.182	ENSACLG00000025227	nop16	94	58.182	Astatotilapia_calliptera
ENSAMXG00000006843	nop16	95	45.509	ENSBTAG00000010734	NOP16	94	45.509	Bos_taurus
ENSAMXG00000006843	nop16	95	44.311	ENSCAFG00000016694	NOP16	94	44.311	Canis_familiaris
ENSAMXG00000006843	nop16	95	44.311	ENSCAFG00020011505	-	89	44.311	Canis_lupus_dingo
ENSAMXG00000006843	nop16	95	45.509	ENSCHIG00000022082	-	94	45.509	Capra_hircus
ENSAMXG00000006843	nop16	93	39.634	ENSTSYG00000032690	-	92	39.634	Carlito_syrichta
ENSAMXG00000006843	nop16	95	44.910	ENSTSYG00000030409	-	94	44.910	Carlito_syrichta
ENSAMXG00000006843	nop16	95	45.509	ENSCPOG00000026072	-	94	45.509	Cavia_porcellus
ENSAMXG00000006843	nop16	93	40.854	ENSCCAG00000026775	-	82	42.254	Cebus_capucinus
ENSAMXG00000006843	nop16	95	42.515	ENSCLAG00000015405	-	80	44.755	Chinchilla_lanigera
ENSAMXG00000006843	nop16	95	44.910	ENSCSAG00000009400	-	94	44.910	Chlorocebus_sabaeus
ENSAMXG00000006843	nop16	93	47.024	ENSCPBG00000022647	-	92	47.024	Chrysemys_picta_bellii
ENSAMXG00000006843	nop16	92	37.500	ENSCING00000006179	-	90	37.500	Ciona_intestinalis
ENSAMXG00000006843	nop16	77	41.176	ENSCSAVG00000000269	-	75	41.606	Ciona_savignyi
ENSAMXG00000006843	nop16	95	44.910	ENSCGRG00001004259	Nop16	94	44.910	Cricetulus_griseus_chok1gshd
ENSAMXG00000006843	nop16	95	44.910	ENSCGRG00000010975	Nop16	94	44.910	Cricetulus_griseus_crigri
ENSAMXG00000006843	nop16	96	53.614	ENSCSEG00000020523	nop16	97	53.614	Cynoglossus_semilaevis
ENSAMXG00000006843	nop16	96	52.410	ENSCVAG00000020140	nop16	95	52.410	Cyprinodon_variegatus
ENSAMXG00000006843	nop16	98	65.089	ENSDARG00000044402	nop16	98	65.089	Danio_rerio
ENSAMXG00000006843	nop16	95	45.181	ENSDNOG00000042890	-	94	45.783	Dasypus_novemcinctus
ENSAMXG00000006843	nop16	96	44.706	ENSDORG00000008872	Nop16	92	44.848	Dipodomys_ordii
ENSAMXG00000006843	nop16	92	38.690	ENSEBUG00000011196	nop16	92	38.690	Eptatretus_burgeri
ENSAMXG00000006843	nop16	95	46.108	ENSEASG00005011988	-	94	46.108	Equus_asinus_asinus
ENSAMXG00000006843	nop16	95	46.108	ENSECAG00000021354	NOP16	94	46.108	Equus_caballus
ENSAMXG00000006843	nop16	98	53.448	ENSELUG00000000401	nop16	98	53.448	Esox_lucius
ENSAMXG00000006843	nop16	95	46.707	ENSFCAG00000025473	-	94	46.707	Felis_catus
ENSAMXG00000006843	nop16	95	45.833	ENSFALG00000008553	-	82	49.660	Ficedula_albicollis
ENSAMXG00000006843	nop16	95	43.114	ENSFDAG00000000193	-	80	45.455	Fukomys_damarensis
ENSAMXG00000006843	nop16	96	51.786	ENSFHEG00000016452	nop16	95	51.786	Fundulus_heteroclitus
ENSAMXG00000006843	nop16	95	46.154	ENSGALG00000003355	-	81	48.966	Gallus_gallus
ENSAMXG00000006843	nop16	84	51.034	ENSGAFG00000011616	nop16	76	51.799	Gambusia_affinis
ENSAMXG00000006843	nop16	91	47.799	ENSGACG00000003122	-	99	50.862	Gasterosteus_aculeatus
ENSAMXG00000006843	nop16	91	50.000	ENSGACG00000020819	-	98	49.697	Gasterosteus_aculeatus
ENSAMXG00000006843	nop16	90	46.452	ENSGACG00000020810	nop16	98	46.386	Gasterosteus_aculeatus
ENSAMXG00000006843	nop16	91	50.318	ENSGACG00000002618	-	98	50.000	Gasterosteus_aculeatus
ENSAMXG00000006843	nop16	95	56.970	ENSHBUG00000013527	nop16	94	56.970	Haplochromis_burtoni
ENSAMXG00000006843	nop16	95	44.311	ENSHGLG00000013437	NOP16	80	46.853	Heterocephalus_glaber_female
ENSAMXG00000006843	nop16	95	44.311	ENSHGLG00100011375	NOP16	80	46.853	Heterocephalus_glaber_male
ENSAMXG00000006843	nop16	95	54.819	ENSHCOG00000019999	nop16	95	54.819	Hippocampus_comes
ENSAMXG00000006843	nop16	97	67.470	ENSIPUG00000006682	nop16	96	67.470	Ictalurus_punctatus
ENSAMXG00000006843	nop16	95	46.154	ENSSTOG00000004869	-	94	46.154	Ictidomys_tridecemlineatus
ENSAMXG00000006843	nop16	95	47.305	ENSJJAG00000017655	Nop16	94	47.305	Jaculus_jaculus
ENSAMXG00000006843	nop16	96	52.381	ENSKMAG00000006164	nop16	95	52.381	Kryptolebias_marmoratus
ENSAMXG00000006843	nop16	58	54.545	ENSLBEG00000013819	-	69	54.545	Labrus_bergylta
ENSAMXG00000006843	nop16	98	51.163	ENSLBEG00000018355	nop16	79	51.163	Labrus_bergylta
ENSAMXG00000006843	nop16	95	50.299	ENSLACG00000014884	nop16	94	50.299	Latimeria_chalumnae
ENSAMXG00000006843	nop16	90	58.228	ENSLOCG00000012348	nop16	92	57.229	Lepisosteus_oculatus
ENSAMXG00000006843	nop16	95	46.386	ENSLAFG00000017886	-	94	46.386	Loxodonta_africana
ENSAMXG00000006843	nop16	92	50.932	ENSMAMG00000021868	nop16	94	50.299	Mastacembelus_armatus
ENSAMXG00000006843	nop16	95	58.182	ENSMZEG00005012112	nop16	94	58.182	Maylandia_zebra
ENSAMXG00000006843	nop16	54	56.989	ENSMGAG00000004726	-	91	56.989	Meleagris_gallopavo
ENSAMXG00000006843	nop16	51	55.682	ENSMAUG00000009852	-	83	55.682	Mesocricetus_auratus
ENSAMXG00000006843	nop16	92	44.444	ENSMAUG00000015569	-	85	46.154	Mesocricetus_auratus
ENSAMXG00000006843	nop16	95	46.108	ENSMOCG00000020788	Nop16	94	46.108	Microtus_ochrogaster
ENSAMXG00000006843	nop16	95	55.422	ENSMMOG00000016054	nop16	97	55.422	Mola_mola
ENSAMXG00000006843	nop16	95	45.238	ENSMODG00000005214	-	94	45.238	Monodelphis_domestica
ENSAMXG00000006843	nop16	91	52.830	ENSMALG00000021263	nop16	95	51.786	Monopterus_albus
ENSAMXG00000006843	nop16	96	45.562	MGP_CAROLIEiJ_G0018538	Nop16	94	46.108	Mus_caroli
ENSAMXG00000006843	nop16	96	45.562	ENSMUSG00000025869	Nop16	94	46.108	Mus_musculus
ENSAMXG00000006843	nop16	95	45.509	MGP_PahariEiJ_G0019603	Nop16	94	45.509	Mus_pahari
ENSAMXG00000006843	nop16	95	46.108	MGP_SPRETEiJ_G0019418	Nop16	94	46.108	Mus_spretus
ENSAMXG00000006843	nop16	95	46.108	ENSMPUG00000016964	-	94	46.108	Mustela_putorius_furo
ENSAMXG00000006843	nop16	95	45.509	ENSMPUG00000012552	-	94	45.509	Mustela_putorius_furo
ENSAMXG00000006843	nop16	93	45.399	ENSMLUG00000003504	-	92	45.399	Myotis_lucifugus
ENSAMXG00000006843	nop16	96	46.154	ENSNGAG00000018045	Nop16	94	46.108	Nannospalax_galili
ENSAMXG00000006843	nop16	94	58.282	ENSNBRG00000015181	nop16	94	58.282	Neolamprologus_brichardi
ENSAMXG00000006843	nop16	95	43.713	ENSODEG00000009586	-	80	46.154	Octodon_degus
ENSAMXG00000006843	nop16	95	57.927	ENSONIG00000016417	nop16	94	57.927	Oreochromis_niloticus
ENSAMXG00000006843	nop16	95	44.311	ENSOCUG00000013171	-	94	44.311	Oryctolagus_cuniculus
ENSAMXG00000006843	nop16	91	55.769	ENSORLG00000026611	nop16	95	53.333	Oryzias_latipes
ENSAMXG00000006843	nop16	96	52.121	ENSOMEG00000023001	nop16	95	52.121	Oryzias_melastigma
ENSAMXG00000006843	nop16	95	47.305	ENSOGAG00000000824	-	94	47.305	Otolemur_garnettii
ENSAMXG00000006843	nop16	95	45.509	ENSOARG00000002165	-	94	45.509	Ovis_aries
ENSAMXG00000006843	nop16	95	44.311	ENSPPAG00000035473	-	94	44.311	Pan_paniscus
ENSAMXG00000006843	nop16	95	46.707	ENSPPRG00000016600	-	94	46.707	Panthera_pardus
ENSAMXG00000006843	nop16	95	46.707	ENSPTIG00000011708	-	94	46.707	Panthera_tigris_altaica
ENSAMXG00000006843	nop16	95	44.311	ENSPTRG00000017560	NOP16	94	44.311	Pan_troglodytes
ENSAMXG00000006843	nop16	92	54.717	ENSPKIG00000009587	nop16	95	53.293	Paramormyrops_kingsleyae
ENSAMXG00000006843	nop16	78	50.000	ENSPSIG00000013546	-	97	50.000	Pelodiscus_sinensis
ENSAMXG00000006843	nop16	94	50.888	ENSPMGG00000003443	nop16	97	51.190	Periophthalmus_magnuspinnatus
ENSAMXG00000006843	nop16	95	47.904	ENSPEMG00000020268	Nop16	94	47.904	Peromyscus_maniculatus_bairdii
ENSAMXG00000006843	nop16	93	43.636	ENSPCIG00000009782	-	93	43.636	Phascolarctos_cinereus
ENSAMXG00000006843	nop16	96	51.190	ENSPFOG00000010549	nop16	95	51.190	Poecilia_formosa
ENSAMXG00000006843	nop16	79	54.412	ENSPLAG00000007124	nop16	71	54.412	Poecilia_latipinna
ENSAMXG00000006843	nop16	96	51.190	ENSPMEG00000008611	nop16	95	51.190	Poecilia_mexicana
ENSAMXG00000006843	nop16	95	51.807	ENSPREG00000012940	nop16	94	51.807	Poecilia_reticulata
ENSAMXG00000006843	nop16	95	43.713	ENSPPYG00000016070	-	94	43.713	Pongo_abelii
ENSAMXG00000006843	nop16	95	57.576	ENSPNYG00000013529	nop16	94	57.576	Pundamilia_nyererei
ENSAMXG00000006843	nop16	99	71.765	ENSPNAG00000016233	nop16	100	71.765	Pygocentrus_nattereri
ENSAMXG00000006843	nop16	95	44.910	ENSRNOG00000017284	Nop16	94	44.910	Rattus_norvegicus
ENSAMXG00000006843	nop16	95	44.643	ENSSHAG00000001724	-	94	44.643	Sarcophilus_harrisii
ENSAMXG00000006843	nop16	92	53.416	ENSSFOG00015010537	nop16	76	52.071	Scleropages_formosus
ENSAMXG00000006843	nop16	95	55.882	ENSSDUG00000022349	nop16	94	55.882	Seriola_dumerili
ENSAMXG00000006843	nop16	95	56.024	ENSSLDG00000025171	nop16	94	56.024	Seriola_lalandi_dorsalis
ENSAMXG00000006843	nop16	69	33.333	ENSSARG00000006699	-	58	33.333	Sorex_araneus
ENSAMXG00000006843	nop16	95	49.102	ENSSPUG00000006508	-	93	49.102	Sphenodon_punctatus
ENSAMXG00000006843	nop16	96	53.892	ENSSPAG00000011772	nop16	95	53.892	Stegastes_partitus
ENSAMXG00000006843	nop16	95	44.910	ENSSSCG00000029577	-	94	44.910	Sus_scrofa
ENSAMXG00000006843	nop16	95	45.562	ENSTGUG00000000543	-	94	45.562	Taeniopygia_guttata
ENSAMXG00000006843	nop16	90	52.229	ENSTRUG00000020255	nop16	94	50.000	Takifugu_rubripes
ENSAMXG00000006843	nop16	90	54.140	ENSTNIG00000007616	nop16	94	51.807	Tetraodon_nigroviridis
ENSAMXG00000006843	nop16	95	44.910	ENSUAMG00000005139	-	94	44.910	Ursus_americanus
ENSAMXG00000006843	nop16	95	44.311	ENSVVUG00000001697	-	89	44.311	Vulpes_vulpes
ENSAMXG00000006843	nop16	90	50.323	ENSXETG00000022342	nop16	92	50.323	Xenopus_tropicalis
ENSAMXG00000006843	nop16	95	51.205	ENSXCOG00000018829	nop16	95	51.205	Xiphophorus_couchianus
ENSAMXG00000006843	nop16	96	51.190	ENSXMAG00000029113	nop16	95	51.190	Xiphophorus_maculatus