EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000006963 (Gene tree)
Gene ID: 103047189
Gene Symbol: si:dkey-10f23.2
Alias: -
Full Name: nuclear transcription factor%2C X-box binding 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 33136 bases
Position: chr16:22360323-22393458
Accession: 103047189
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000007165	R3H	PF01424.22	2.6e-19	1	1
ENSAMXP00000045103	R3H	PF01424.22	2.6e-19	1	1
ENSAMXP00000047107	R3H	PF01424.22	2.6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000007165	-	4926	-	ENSAMXP00000007165	1116 (aa)	-	W5KHV3
ENSAMXT00000057163	-	4926	-	ENSAMXP00000047107	1116 (aa)	-	UPI000BBE0082
ENSAMXT00000054424	-	4926	XM_007230314	ENSAMXP00000045103	1116 (aa)	XP_007230376	UPI000BBE0082

Gene Model

Click here to download ENSAMXG00000006963's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000006963's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000006963	si:dkey-10f23.2	85	54.490	ENSG00000086102	NFX1	70	62.832	Homo_sapiens
ENSAMXG00000006963	si:dkey-10f23.2	100	60.158	ENSAPOG00000016671	si:dkey-10f23.2	98	61.166	Acanthochromis_polyacanthus
ENSAMXG00000006963	si:dkey-10f23.2	87	54.138	ENSAMEG00000007472	NFX1	73	60.843	Ailuropoda_melanoleuca
ENSAMXG00000006963	si:dkey-10f23.2	74	73.150	ENSACIG00000021055	si:dkey-10f23.2	79	73.508	Amphilophus_citrinellus
ENSAMXG00000006963	si:dkey-10f23.2	74	73.389	ENSAOCG00000017316	si:dkey-10f23.2	83	73.389	Amphiprion_ocellaris
ENSAMXG00000006963	si:dkey-10f23.2	94	61.275	ENSAPEG00000012401	si:dkey-10f23.2	81	73.747	Amphiprion_percula
ENSAMXG00000006963	si:dkey-10f23.2	98	60.400	ENSATEG00000002080	si:dkey-10f23.2	98	60.295	Anabas_testudineus
ENSAMXG00000006963	si:dkey-10f23.2	71	64.565	ENSAPLG00000005524	NFX1	70	64.943	Anas_platyrhynchos
ENSAMXG00000006963	si:dkey-10f23.2	95	50.879	ENSACAG00000002412	NFX1	72	61.776	Anolis_carolinensis
ENSAMXG00000006963	si:dkey-10f23.2	85	54.010	ENSANAG00000001809	NFX1	70	62.453	Aotus_nancymaae
ENSAMXG00000006963	si:dkey-10f23.2	70	78.327	ENSACLG00000003795	si:dkey-10f23.2	79	74.821	Astatotilapia_calliptera
ENSAMXG00000006963	si:dkey-10f23.2	85	54.222	ENSBTAG00000012385	NFX1	71	62.658	Bos_taurus
ENSAMXG00000006963	si:dkey-10f23.2	91	36.143	WBGene00007048	nfx-1	77	39.160	Caenorhabditis_elegans
ENSAMXG00000006963	si:dkey-10f23.2	94	50.276	ENSCJAG00000008142	NFX1	71	62.579	Callithrix_jacchus
ENSAMXG00000006963	si:dkey-10f23.2	85	55.000	ENSCAFG00000001848	NFX1	71	62.720	Canis_familiaris
ENSAMXG00000006963	si:dkey-10f23.2	85	55.169	ENSCAFG00020015630	NFX1	71	62.958	Canis_lupus_dingo
ENSAMXG00000006963	si:dkey-10f23.2	85	54.018	ENSCHIG00000020037	NFX1	71	62.405	Capra_hircus
ENSAMXG00000006963	si:dkey-10f23.2	85	55.771	ENSTSYG00000004125	NFX1	70	62.958	Carlito_syrichta
ENSAMXG00000006963	si:dkey-10f23.2	85	49.444	ENSCAPG00000005611	NFX1	88	53.448	Cavia_aperea
ENSAMXG00000006963	si:dkey-10f23.2	87	53.564	ENSCPOG00000003470	NFX1	74	61.131	Cavia_porcellus
ENSAMXG00000006963	si:dkey-10f23.2	85	54.120	ENSCCAG00000025001	NFX1	70	62.579	Cebus_capucinus
ENSAMXG00000006963	si:dkey-10f23.2	85	52.798	ENSCLAG00000002893	NFX1	72	59.046	Chinchilla_lanigera
ENSAMXG00000006963	si:dkey-10f23.2	85	54.592	ENSCSAG00000009971	NFX1	70	63.085	Chlorocebus_sabaeus
ENSAMXG00000006963	si:dkey-10f23.2	67	59.677	ENSCHOG00000009225	NFX1	69	59.603	Choloepus_hoffmanni
ENSAMXG00000006963	si:dkey-10f23.2	71	63.763	ENSCPBG00000017928	NFX1	71	64.525	Chrysemys_picta_bellii
ENSAMXG00000006963	si:dkey-10f23.2	80	45.011	ENSCING00000004746	nf-x-like	70	48.443	Ciona_intestinalis
ENSAMXG00000006963	si:dkey-10f23.2	76	45.497	ENSCSAVG00000005762	-	74	45.819	Ciona_savignyi
ENSAMXG00000006963	si:dkey-10f23.2	71	59.924	ENSCANG00000028364	NFX1	70	59.924	Colobus_angolensis_palliatus
ENSAMXG00000006963	si:dkey-10f23.2	77	56.243	ENSCGRG00001002869	Nfx1	75	56.243	Cricetulus_griseus_chok1gshd
ENSAMXG00000006963	si:dkey-10f23.2	77	59.510	ENSCGRG00000016032	Nfx1	76	59.510	Cricetulus_griseus_crigri
ENSAMXG00000006963	si:dkey-10f23.2	90	60.096	ENSCSEG00000019832	si:dkey-10f23.2	83	69.087	Cynoglossus_semilaevis
ENSAMXG00000006963	si:dkey-10f23.2	77	71.379	ENSCVAG00000010039	si:dkey-10f23.2	80	71.379	Cyprinodon_variegatus
ENSAMXG00000006963	si:dkey-10f23.2	100	66.607	ENSDARG00000105669	NFX1	100	66.400	Danio_rerio
ENSAMXG00000006963	si:dkey-10f23.2	72	60.074	ENSDNOG00000002079	NFX1	72	60.074	Dasypus_novemcinctus
ENSAMXG00000006963	si:dkey-10f23.2	78	53.681	ENSDORG00000001989	Nfx1	77	53.750	Dipodomys_ordii
ENSAMXG00000006963	si:dkey-10f23.2	69	43.887	FBgn0001978	stc	69	43.887	Drosophila_melanogaster
ENSAMXG00000006963	si:dkey-10f23.2	70	70.968	ENSETEG00000001427	NFX1	65	70.968	Echinops_telfairi
ENSAMXG00000006963	si:dkey-10f23.2	76	53.372	ENSEBUG00000006923	si:dkey-10f23.2	67	53.372	Eptatretus_burgeri
ENSAMXG00000006963	si:dkey-10f23.2	71	62.958	ENSEASG00005004230	NFX1	65	62.958	Equus_asinus_asinus
ENSAMXG00000006963	si:dkey-10f23.2	85	55.137	ENSECAG00000021305	NFX1	65	62.958	Equus_caballus
ENSAMXG00000006963	si:dkey-10f23.2	68	59.574	ENSEEUG00000001694	NFX1	67	59.574	Erinaceus_europaeus
ENSAMXG00000006963	si:dkey-10f23.2	99	58.062	ENSELUG00000007422	si:dkey-10f23.2	98	58.903	Esox_lucius
ENSAMXG00000006963	si:dkey-10f23.2	85	54.852	ENSFCAG00000007905	NFX1	71	62.958	Felis_catus
ENSAMXG00000006963	si:dkey-10f23.2	71	64.981	ENSFALG00000013143	NFX1	70	64.981	Ficedula_albicollis
ENSAMXG00000006963	si:dkey-10f23.2	85	55.056	ENSFDAG00000012320	NFX1	78	58.333	Fukomys_damarensis
ENSAMXG00000006963	si:dkey-10f23.2	100	60.619	ENSFHEG00000017330	si:dkey-10f23.2	98	61.243	Fundulus_heteroclitus
ENSAMXG00000006963	si:dkey-10f23.2	66	71.003	ENSGMOG00000006198	si:dkey-10f23.2	99	71.003	Gadus_morhua
ENSAMXG00000006963	si:dkey-10f23.2	71	64.981	ENSGALG00000043724	NFX1	70	64.981	Gallus_gallus
ENSAMXG00000006963	si:dkey-10f23.2	75	72.652	ENSGAFG00000000226	si:dkey-10f23.2	79	72.652	Gambusia_affinis
ENSAMXG00000006963	si:dkey-10f23.2	66	72.813	ENSGACG00000004560	si:dkey-10f23.2	98	72.813	Gasterosteus_aculeatus
ENSAMXG00000006963	si:dkey-10f23.2	85	54.490	ENSGGOG00000006751	NFX1	70	62.958	Gorilla_gorilla
ENSAMXG00000006963	si:dkey-10f23.2	70	78.454	ENSHBUG00000015403	si:dkey-10f23.2	79	74.940	Haplochromis_burtoni
ENSAMXG00000006963	si:dkey-10f23.2	78	58.790	ENSHGLG00000008375	NFX1	77	59.153	Heterocephalus_glaber_female
ENSAMXG00000006963	si:dkey-10f23.2	78	58.790	ENSHGLG00100016433	NFX1	77	59.153	Heterocephalus_glaber_male
ENSAMXG00000006963	si:dkey-10f23.2	73	71.184	ENSHCOG00000001235	si:dkey-10f23.2	79	71.359	Hippocampus_comes
ENSAMXG00000006963	si:dkey-10f23.2	99	70.683	ENSIPUG00000005961	si:dkey-10f23.2	98	71.442	Ictalurus_punctatus
ENSAMXG00000006963	si:dkey-10f23.2	85	55.271	ENSSTOG00000006984	NFX1	71	62.832	Ictidomys_tridecemlineatus
ENSAMXG00000006963	si:dkey-10f23.2	86	54.646	ENSJJAG00000023303	Nfx1	71	63.085	Jaculus_jaculus
ENSAMXG00000006963	si:dkey-10f23.2	76	70.892	ENSKMAG00000016306	si:dkey-10f23.2	79	70.892	Kryptolebias_marmoratus
ENSAMXG00000006963	si:dkey-10f23.2	93	58.752	ENSLBEG00000013253	si:dkey-10f23.2	76	68.937	Labrus_bergylta
ENSAMXG00000006963	si:dkey-10f23.2	73	66.220	ENSLACG00000000769	NFX1	80	66.220	Latimeria_chalumnae
ENSAMXG00000006963	si:dkey-10f23.2	96	59.763	ENSLOCG00000011211	si:dkey-10f23.2	94	72.683	Lepisosteus_oculatus
ENSAMXG00000006963	si:dkey-10f23.2	85	52.037	ENSMFAG00000038715	NFX1	70	63.085	Macaca_fascicularis
ENSAMXG00000006963	si:dkey-10f23.2	85	54.416	ENSMMUG00000043096	NFX1	71	62.673	Macaca_mulatta
ENSAMXG00000006963	si:dkey-10f23.2	85	54.416	ENSMNEG00000036057	NFX1	70	63.085	Macaca_nemestrina
ENSAMXG00000006963	si:dkey-10f23.2	85	54.416	ENSMLEG00000040882	NFX1	70	63.085	Mandrillus_leucophaeus
ENSAMXG00000006963	si:dkey-10f23.2	75	70.540	ENSMAMG00000010139	si:dkey-10f23.2	78	70.540	Mastacembelus_armatus
ENSAMXG00000006963	si:dkey-10f23.2	70	78.200	ENSMZEG00005018390	si:dkey-10f23.2	79	74.702	Maylandia_zebra
ENSAMXG00000006963	si:dkey-10f23.2	78	56.023	ENSMICG00000012124	NFX1	70	60.101	Microcebus_murinus
ENSAMXG00000006963	si:dkey-10f23.2	77	59.488	ENSMOCG00000007616	Nfx1	76	59.488	Microtus_ochrogaster
ENSAMXG00000006963	si:dkey-10f23.2	75	69.053	ENSMMOG00000004171	si:dkey-10f23.2	95	69.053	Mola_mola
ENSAMXG00000006963	si:dkey-10f23.2	72	63.490	ENSMODG00000003990	NFX1	72	63.490	Monodelphis_domestica
ENSAMXG00000006963	si:dkey-10f23.2	81	67.579	ENSMALG00000017326	si:dkey-10f23.2	92	70.311	Monopterus_albus
ENSAMXG00000006963	si:dkey-10f23.2	71	62.326	MGP_CAROLIEiJ_G0025904	Nfx1	71	62.705	Mus_caroli
ENSAMXG00000006963	si:dkey-10f23.2	71	62.705	ENSMUSG00000028423	Nfx1	71	62.705	Mus_musculus
ENSAMXG00000006963	si:dkey-10f23.2	73	60.775	MGP_PahariEiJ_G0024027	Nfx1	74	61.138	Mus_pahari
ENSAMXG00000006963	si:dkey-10f23.2	71	62.326	MGP_SPRETEiJ_G0026852	Nfx1	71	62.705	Mus_spretus
ENSAMXG00000006963	si:dkey-10f23.2	71	62.579	ENSMPUG00000004111	NFX1	71	62.579	Mustela_putorius_furo
ENSAMXG00000006963	si:dkey-10f23.2	71	62.217	ENSMLUG00000011069	NFX1	71	62.217	Myotis_lucifugus
ENSAMXG00000006963	si:dkey-10f23.2	85	54.740	ENSNGAG00000005385	Nfx1	73	61.491	Nannospalax_galili
ENSAMXG00000006963	si:dkey-10f23.2	70	77.848	ENSNBRG00000013449	si:dkey-10f23.2	78	74.374	Neolamprologus_brichardi
ENSAMXG00000006963	si:dkey-10f23.2	85	55.612	ENSNLEG00000005096	NFX1	70	63.211	Nomascus_leucogenys
ENSAMXG00000006963	si:dkey-10f23.2	74	58.795	ENSMEUG00000012002	NFX1	68	58.795	Notamacropus_eugenii
ENSAMXG00000006963	si:dkey-10f23.2	83	51.772	ENSOPRG00000009816	NFX1	74	58.505	Ochotona_princeps
ENSAMXG00000006963	si:dkey-10f23.2	87	53.869	ENSODEG00000015229	NFX1	72	62.176	Octodon_degus
ENSAMXG00000006963	si:dkey-10f23.2	73	75.795	ENSONIG00000006192	si:dkey-10f23.2	75	75.795	Oreochromis_niloticus
ENSAMXG00000006963	si:dkey-10f23.2	71	58.512	ENSOANG00000002524	NFX1	72	58.690	Ornithorhynchus_anatinus
ENSAMXG00000006963	si:dkey-10f23.2	71	59.292	ENSOCUG00000008957	NFX1	69	59.292	Oryctolagus_cuniculus
ENSAMXG00000006963	si:dkey-10f23.2	89	62.052	ENSORLG00000026662	si:dkey-10f23.2	91	68.398	Oryzias_latipes
ENSAMXG00000006963	si:dkey-10f23.2	89	61.955	ENSORLG00020000170	si:dkey-10f23.2	91	68.287	Oryzias_latipes_hni
ENSAMXG00000006963	si:dkey-10f23.2	92	60.764	ENSORLG00015008191	si:dkey-10f23.2	85	68.508	Oryzias_latipes_hsok
ENSAMXG00000006963	si:dkey-10f23.2	81	68.113	ENSOMEG00000001814	si:dkey-10f23.2	79	74.447	Oryzias_melastigma
ENSAMXG00000006963	si:dkey-10f23.2	86	52.434	ENSOGAG00000000775	NFX1	71	60.430	Otolemur_garnettii
ENSAMXG00000006963	si:dkey-10f23.2	85	54.018	ENSOARG00000009478	NFX1	79	58.068	Ovis_aries
ENSAMXG00000006963	si:dkey-10f23.2	85	54.490	ENSPPAG00000027871	NFX1	70	62.832	Pan_paniscus
ENSAMXG00000006963	si:dkey-10f23.2	85	54.648	ENSPPRG00000000665	NFX1	71	62.705	Panthera_pardus
ENSAMXG00000006963	si:dkey-10f23.2	85	54.648	ENSPTIG00000012443	NFX1	71	62.705	Panthera_tigris_altaica
ENSAMXG00000006963	si:dkey-10f23.2	85	54.490	ENSPTRG00000020858	NFX1	70	62.832	Pan_troglodytes
ENSAMXG00000006963	si:dkey-10f23.2	70	63.278	ENSPANG00000025304	NFX1	70	63.278	Papio_anubis
ENSAMXG00000006963	si:dkey-10f23.2	73	70.654	ENSPKIG00000016899	si:dkey-10f23.2	77	69.461	Paramormyrops_kingsleyae
ENSAMXG00000006963	si:dkey-10f23.2	71	64.096	ENSPSIG00000008420	NFX1	70	64.096	Pelodiscus_sinensis
ENSAMXG00000006963	si:dkey-10f23.2	74	60.457	ENSPEMG00000007625	Nfx1	74	60.457	Peromyscus_maniculatus_bairdii
ENSAMXG00000006963	si:dkey-10f23.2	70	55.388	ENSPMAG00000003556	si:dkey-10f23.2	100	55.388	Petromyzon_marinus
ENSAMXG00000006963	si:dkey-10f23.2	75	72.544	ENSPFOG00000012547	si:dkey-10f23.2	79	72.544	Poecilia_formosa
ENSAMXG00000006963	si:dkey-10f23.2	75	72.414	ENSPLAG00000010574	si:dkey-10f23.2	79	72.414	Poecilia_latipinna
ENSAMXG00000006963	si:dkey-10f23.2	75	72.533	ENSPMEG00000015322	si:dkey-10f23.2	79	72.533	Poecilia_mexicana
ENSAMXG00000006963	si:dkey-10f23.2	75	72.954	ENSPREG00000006186	si:dkey-10f23.2	79	72.954	Poecilia_reticulata
ENSAMXG00000006963	si:dkey-10f23.2	62	61.748	ENSPPYG00000019136	-	100	61.748	Pongo_abelii
ENSAMXG00000006963	si:dkey-10f23.2	64	52.500	ENSPCAG00000006913	NFX1	65	52.500	Procavia_capensis
ENSAMXG00000006963	si:dkey-10f23.2	86	54.158	ENSPCOG00000015789	NFX1	71	61.947	Propithecus_coquereli
ENSAMXG00000006963	si:dkey-10f23.2	64	58.750	ENSPVAG00000011479	NFX1	64	58.750	Pteropus_vampyrus
ENSAMXG00000006963	si:dkey-10f23.2	70	78.454	ENSPNYG00000002175	si:dkey-10f23.2	79	74.940	Pundamilia_nyererei
ENSAMXG00000006963	si:dkey-10f23.2	100	78.304	ENSPNAG00000016667	si:dkey-10f23.2	100	78.482	Pygocentrus_nattereri
ENSAMXG00000006963	si:dkey-10f23.2	77	59.488	ENSRNOG00000009015	Nfx1	75	59.488	Rattus_norvegicus
ENSAMXG00000006963	si:dkey-10f23.2	85	43.043	ENSRBIG00000036482	NFX1	68	55.499	Rhinopithecus_bieti
ENSAMXG00000006963	si:dkey-10f23.2	85	55.397	ENSRROG00000026461	NFX1	76	63.085	Rhinopithecus_roxellana
ENSAMXG00000006963	si:dkey-10f23.2	69	30.516	YNL023C	-	82	30.516	Saccharomyces_cerevisiae
ENSAMXG00000006963	si:dkey-10f23.2	86	47.197	ENSSBOG00000035261	NFX1	68	54.235	Saimiri_boliviensis_boliviensis
ENSAMXG00000006963	si:dkey-10f23.2	95	52.070	ENSSHAG00000010272	NFX1	74	61.621	Sarcophilus_harrisii
ENSAMXG00000006963	si:dkey-10f23.2	71	73.217	ENSSFOG00015019271	si:dkey-10f23.2	73	73.217	Scleropages_formosus
ENSAMXG00000006963	si:dkey-10f23.2	76	72.865	ENSSMAG00000015963	si:dkey-10f23.2	81	72.865	Scophthalmus_maximus
ENSAMXG00000006963	si:dkey-10f23.2	100	60.758	ENSSDUG00000009395	si:dkey-10f23.2	98	61.733	Seriola_dumerili
ENSAMXG00000006963	si:dkey-10f23.2	100	59.913	ENSSLDG00000023817	si:dkey-10f23.2	98	60.873	Seriola_lalandi_dorsalis
ENSAMXG00000006963	si:dkey-10f23.2	51	62.814	ENSSARG00000014320	NFX1	59	62.814	Sorex_araneus
ENSAMXG00000006963	si:dkey-10f23.2	100	60.526	ENSSPAG00000012861	si:dkey-10f23.2	98	61.116	Stegastes_partitus
ENSAMXG00000006963	si:dkey-10f23.2	85	53.163	ENSSSCG00000010994	NFX1	70	60.782	Sus_scrofa
ENSAMXG00000006963	si:dkey-10f23.2	71	58.154	ENSTGUG00000007055	NFX1	100	58.154	Taeniopygia_guttata
ENSAMXG00000006963	si:dkey-10f23.2	63	64.497	ENSTBEG00000004560	NFX1	59	63.889	Tupaia_belangeri
ENSAMXG00000006963	si:dkey-10f23.2	69	72.662	ENSTTRG00000010576	NFX1	56	72.662	Tursiops_truncatus
ENSAMXG00000006963	si:dkey-10f23.2	87	54.038	ENSUMAG00000006016	NFX1	73	60.723	Ursus_maritimus
ENSAMXG00000006963	si:dkey-10f23.2	85	55.215	ENSVVUG00000021100	NFX1	71	62.958	Vulpes_vulpes
ENSAMXG00000006963	si:dkey-10f23.2	95	53.145	ENSXETG00000014997	nfx1	73	64.174	Xenopus_tropicalis
ENSAMXG00000006963	si:dkey-10f23.2	75	71.953	ENSXMAG00000001963	si:dkey-10f23.2	79	71.953	Xiphophorus_maculatus