EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAMXG00000007005 (Gene tree)
Gene ID
103037410
Gene Symbol
srsf7b
Alias
sfrs7|srsf7|zgc:114203
Full Name
serine and arginine rich splicing factor 7
Gene Type
protein_coding
Species
Astyanax_mexicanus
Status
putative
Strand
Plus strand
Length
8234 bases
Position
chr5:29643325-29651558
Accession
103037410
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAMXP00000028664RRM_1PF00076.223.2e-1611
ENSAMXP00000033992RRM_1PF00076.223.7e-1611
ENSAMXP00000007193RRM_1PF00076.224.1e-1611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAMXT00000007193-1645XM_007231789ENSAMXP00000007193240 (aa)XP_007231851W5KHY1
ENSAMXT00000053252-2986-ENSAMXP00000028664211 (aa)--
ENSAMXT00000034860-1609XM_007231790ENSAMXP00000033992228 (aa)XP_007231852UPI000BBDFE14
Gene Model
Click here to download ENSAMXG00000007005's gene model file
Pathways
Pathway IDPathway NameSource
amex03040SpliceosomeKEGG
amex05168Herpes simplex virus 1 infectionKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000007005's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAMXG00000007005srsf7b5130.702ENSAMXG00000033790zcrb15231.034
ENSAMXG00000007005srsf7b9131.373ENSAMXG00000034811srsf47443.038
ENSAMXG00000007005srsf7b6948.101ENSAMXG00000033364srsf3a5967.021
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAMXG00000007005srsf7b5793.333ENSG00000115875SRSF79193.333Homo_sapiens
ENSAMXG00000007005srsf7b5790.833ENSACIG00000009890srsf7b9290.833Amphilophus_citrinellus
ENSAMXG00000007005srsf7b5573.913ENSACIG00000004885srsf7a7673.109Amphilophus_citrinellus
ENSAMXG00000007005srsf7b5768.033ENSAOCG00000021499srsf7b8165.789Amphiprion_ocellaris
ENSAMXG00000007005srsf7b5768.033ENSAPEG00000018802srsf7b8165.789Amphiprion_percula
ENSAMXG00000007005srsf7b7148.667ENSATEG00000006193srsf3b6369.149Anabas_testudineus
ENSAMXG00000007005srsf7b5393.694ENSAPLG00000012167-5192.857Anas_platyrhynchos
ENSAMXG00000007005srsf7b5794.167ENSACAG00000006082SRSF710080.417Anolis_carolinensis
ENSAMXG00000007005srsf7b5793.333ENSANAG00000019399SRSF78893.333Aotus_nancymaae
ENSAMXG00000007005srsf7b6546.715ENSANAG00000035091-6967.089Aotus_nancymaae
ENSAMXG00000007005srsf7b5793.333ENSBTAG00000014891SRSF78893.333Bos_taurus
ENSAMXG00000007005srsf7b5793.333ENSCJAG00000015185SRSF78893.333Callithrix_jacchus
ENSAMXG00000007005srsf7b5793.333ENSCAFG00000029620SRSF75093.333Canis_familiaris
ENSAMXG00000007005srsf7b5793.333ENSCAFG00020022807SRSF78893.333Canis_lupus_dingo
ENSAMXG00000007005srsf7b5565.812ENSCAFG00020013547-6966.964Canis_lupus_dingo
ENSAMXG00000007005srsf7b5793.333ENSCHIG00000019180SRSF78893.333Capra_hircus
ENSAMXG00000007005srsf7b5793.333ENSTSYG00000012273SRSF78893.333Carlito_syrichta
ENSAMXG00000007005srsf7b5793.333ENSCPOG00000033318SRSF78893.333Cavia_porcellus
ENSAMXG00000007005srsf7b5793.333ENSCATG00000031728SRSF78893.333Cercocebus_atys
ENSAMXG00000007005srsf7b5793.333ENSCLAG00000005235SRSF78893.333Chinchilla_lanigera
ENSAMXG00000007005srsf7b5793.333ENSCSAG00000012296SRSF75093.333Chlorocebus_sabaeus
ENSAMXG00000007005srsf7b5791.667ENSCPBG00000018252-8891.667Chrysemys_picta_bellii
ENSAMXG00000007005srsf7b5794.167ENSCPBG00000018247-8894.167Chrysemys_picta_bellii
ENSAMXG00000007005srsf7b5555.385ENSCING00000023459-5556.349Ciona_intestinalis
ENSAMXG00000007005srsf7b5455.556ENSCSAVG00000010868-5658.065Ciona_savignyi
ENSAMXG00000007005srsf7b7050.000ENSCSAVG00000007369-7257.480Ciona_savignyi
ENSAMXG00000007005srsf7b5793.333ENSCANG00000040757SRSF78893.333Colobus_angolensis_palliatus
ENSAMXG00000007005srsf7b5793.333ENSCGRG00001018245Srsf75093.333Cricetulus_griseus_chok1gshd
ENSAMXG00000007005srsf7b5593.966ENSCGRG00000005929Srsf78593.966Cricetulus_griseus_crigri
ENSAMXG00000007005srsf7b7151.333ENSCSEG00000002271srsf3b7367.010Cynoglossus_semilaevis
ENSAMXG00000007005srsf7b6270.455ENSCSEG00000006378srsf7a8672.131Cynoglossus_semilaevis
ENSAMXG00000007005srsf7b5886.885ENSCVAG00000006768srsf7b9267.490Cyprinodon_variegatus
ENSAMXG00000007005srsf7b5475.221ENSCVAG00000020083srsf7a8357.083Cyprinodon_variegatus
ENSAMXG00000007005srsf7b8964.398ENSDARG00000035325srsf7a9674.444Danio_rerio
ENSAMXG00000007005srsf7b5791.667ENSDARG00000101057srsf7b7991.667Danio_rerio
ENSAMXG00000007005srsf7b6649.333ENSDARG00000059360srsf3b7669.149Danio_rerio
ENSAMXG00000007005srsf7b5793.333ENSDNOG00000007821SRSF78893.333Dasypus_novemcinctus
ENSAMXG00000007005srsf7b5793.333ENSDORG00000008616Srsf75093.333Dipodomys_ordii
ENSAMXG00000007005srsf7b5552.713FBgn0028554x165153.383Drosophila_melanogaster
ENSAMXG00000007005srsf7b5675.630ENSEBUG00000004912srsf7a5175.630Eptatretus_burgeri
ENSAMXG00000007005srsf7b5793.333ENSEASG00005005547SRSF78893.333Equus_asinus_asinus
ENSAMXG00000007005srsf7b5793.333ENSECAG00000008664SRSF75093.333Equus_caballus
ENSAMXG00000007005srsf7b5793.333ENSEEUG00000014487SRSF75093.333Erinaceus_europaeus
ENSAMXG00000007005srsf7b5478.761ENSELUG00000016922srsf7a7779.630Esox_lucius
ENSAMXG00000007005srsf7b9981.132ENSELUG00000018155srsf7b9979.817Esox_lucius
ENSAMXG00000007005srsf7b5793.333ENSFCAG00000031143SRSF75593.333Felis_catus
ENSAMXG00000007005srsf7b5362.162ENSFCAG00000028644-7362.162Felis_catus
ENSAMXG00000007005srsf7b5395.495ENSFALG00000002358-9778.926Ficedula_albicollis
ENSAMXG00000007005srsf7b5793.333ENSFDAG00000016030-8893.333Fukomys_damarensis
ENSAMXG00000007005srsf7b5680.672ENSFDAG00000017258-5280.833Fukomys_damarensis
ENSAMXG00000007005srsf7b9060.733ENSFHEG00000007159srsf7a6572.727Fundulus_heteroclitus
ENSAMXG00000007005srsf7b6653.957ENSFHEG00000014610-7571.579Fundulus_heteroclitus
ENSAMXG00000007005srsf7b5886.885ENSFHEG00000023046srsf7b5386.667Fundulus_heteroclitus
ENSAMXG00000007005srsf7b5572.650ENSGMOG00000002004srsf7a9749.333Gadus_morhua
ENSAMXG00000007005srsf7b5793.333ENSGALG00000038528-10078.400Gallus_gallus
ENSAMXG00000007005srsf7b5790.833ENSGALG00000033120SRSF78790.833Gallus_gallus
ENSAMXG00000007005srsf7b5588.696ENSGAFG00000008856srsf7b8187.611Gambusia_affinis
ENSAMXG00000007005srsf7b5475.221ENSGAFG00000002177srsf7a8965.000Gambusia_affinis
ENSAMXG00000007005srsf7b5790.000ENSGAGG00000016294-8890.000Gopherus_agassizii
ENSAMXG00000007005srsf7b5791.667ENSGAGG00000003553SRSF78891.667Gopherus_agassizii
ENSAMXG00000007005srsf7b5793.333ENSGGOG00000014620SRSF78893.333Gorilla_gorilla
ENSAMXG00000007005srsf7b5793.333ENSHGLG00000013954-5093.333Heterocephalus_glaber_female
ENSAMXG00000007005srsf7b5769.600ENSHGLG00000005295-8869.600Heterocephalus_glaber_female
ENSAMXG00000007005srsf7b5769.600ENSHGLG00100014570-8869.600Heterocephalus_glaber_male
ENSAMXG00000007005srsf7b5793.333ENSHGLG00100006124-8893.333Heterocephalus_glaber_male
ENSAMXG00000007005srsf7b5574.359ENSHCOG00000016135srsf7a8962.443Hippocampus_comes
ENSAMXG00000007005srsf7b6788.732ENSIPUG00000011708srsf710077.542Ictalurus_punctatus
ENSAMXG00000007005srsf7b5793.333ENSSTOG00000004389SRSF78893.333Ictidomys_tridecemlineatus
ENSAMXG00000007005srsf7b5793.333ENSJJAG00000023079Srsf75093.333Jaculus_jaculus
ENSAMXG00000007005srsf7b6963.265ENSJJAG00000020230-7267.769Jaculus_jaculus
ENSAMXG00000007005srsf7b5281.818ENSLACG00000018688srsf7a5678.448Latimeria_chalumnae
ENSAMXG00000007005srsf7b5692.437ENSLACG00000004052SRSF75092.437Latimeria_chalumnae
ENSAMXG00000007005srsf7b5376.577ENSLOCG00000014314-6474.790Lepisosteus_oculatus
ENSAMXG00000007005srsf7b5694.118ENSLOCG00000015778srsf7b10081.405Lepisosteus_oculatus
ENSAMXG00000007005srsf7b5793.333ENSLAFG00000005666SRSF77593.333Loxodonta_africana
ENSAMXG00000007005srsf7b5793.333ENSMFAG00000001980SRSF78893.333Macaca_fascicularis
ENSAMXG00000007005srsf7b5693.277ENSMMUG00000011025SRSF77194.444Macaca_mulatta
ENSAMXG00000007005srsf7b5693.277ENSMNEG00000036669SRSF77194.444Macaca_nemestrina
ENSAMXG00000007005srsf7b5793.333ENSMLEG00000038852SRSF78893.333Mandrillus_leucophaeus
ENSAMXG00000007005srsf7b5792.500ENSMAMG00000017138srsf7b9969.068Mastacembelus_armatus
ENSAMXG00000007005srsf7b5395.495ENSMGAG00000007415SRSF75195.495Meleagris_gallopavo
ENSAMXG00000007005srsf7b5579.310ENSMAUG00000021932-6077.500Mesocricetus_auratus
ENSAMXG00000007005srsf7b7647.239ENSMAUG00000011430-6254.255Mesocricetus_auratus
ENSAMXG00000007005srsf7b5793.333ENSMAUG00000017430Srsf75093.333Mesocricetus_auratus
ENSAMXG00000007005srsf7b5693.277ENSMICG00000005046SRSF77194.444Microcebus_murinus
ENSAMXG00000007005srsf7b5888.618ENSMOCG00000022763-5189.167Microtus_ochrogaster
ENSAMXG00000007005srsf7b5872.000ENSMMOG00000005208srsf7a8072.358Mola_mola
ENSAMXG00000007005srsf7b5794.167ENSMODG00000008669-5194.167Monodelphis_domestica
ENSAMXG00000007005srsf7b5689.916ENSMODG00000023693-10073.333Monodelphis_domestica
ENSAMXG00000007005srsf7b5793.333MGP_CAROLIEiJ_G0021902Srsf75093.333Mus_caroli
ENSAMXG00000007005srsf7b5793.333ENSMUSG00000024097Srsf78893.333Mus_musculus
ENSAMXG00000007005srsf7b5792.500MGP_PahariEiJ_G0020891Srsf75092.500Mus_pahari
ENSAMXG00000007005srsf7b5793.333MGP_SPRETEiJ_G0022817Srsf75093.333Mus_spretus
ENSAMXG00000007005srsf7b5786.667ENSMLUG00000015692-5486.667Myotis_lucifugus
ENSAMXG00000007005srsf7b5793.333ENSMLUG00000009536SRSF75093.333Myotis_lucifugus
ENSAMXG00000007005srsf7b5793.333ENSNGAG00000014431Srsf75093.333Nannospalax_galili
ENSAMXG00000007005srsf7b5573.043ENSNBRG00000006601srsf7a7672.269Neolamprologus_brichardi
ENSAMXG00000007005srsf7b5793.333ENSNLEG00000016349SRSF78893.333Nomascus_leucogenys
ENSAMXG00000007005srsf7b5794.167ENSMEUG00000016459-5194.167Notamacropus_eugenii
ENSAMXG00000007005srsf7b5292.661ENSMEUG00000000773-5792.727Notamacropus_eugenii
ENSAMXG00000007005srsf7b5793.333ENSOPRG00000010234SRSF75293.333Ochotona_princeps
ENSAMXG00000007005srsf7b5476.991ENSODEG00000008570-6076.724Octodon_degus
ENSAMXG00000007005srsf7b5793.333ENSODEG00000010029-5093.333Octodon_degus
ENSAMXG00000007005srsf7b5394.643ENSOANG00000004405SRSF79580.687Ornithorhynchus_anatinus
ENSAMXG00000007005srsf7b5793.333ENSOCUG00000004087SRSF75093.333Oryctolagus_cuniculus
ENSAMXG00000007005srsf7b5571.795ENSORLG00020020654srsf7a5265.714Oryzias_latipes_hni
ENSAMXG00000007005srsf7b5571.795ENSORLG00015009569srsf7a5265.714Oryzias_latipes_hsok
ENSAMXG00000007005srsf7b8250.575ENSORLG00015004309srsf3b5867.010Oryzias_latipes_hsok
ENSAMXG00000007005srsf7b8250.575ENSOMEG00000014893srsf3b6467.010Oryzias_melastigma
ENSAMXG00000007005srsf7b5793.333ENSOGAG00000010169SRSF75093.333Otolemur_garnettii
ENSAMXG00000007005srsf7b6192.188ENSOARG00000008771SRSF710063.900Ovis_aries
ENSAMXG00000007005srsf7b5693.277ENSPPAG00000017907SRSF77194.444Pan_paniscus
ENSAMXG00000007005srsf7b5793.333ENSPPRG00000003682SRSF75593.333Panthera_pardus
ENSAMXG00000007005srsf7b5793.333ENSPTIG00000006350SRSF75593.333Panthera_tigris_altaica
ENSAMXG00000007005srsf7b8176.608ENSPTRG00000011851SRSF77194.444Pan_troglodytes
ENSAMXG00000007005srsf7b5693.277ENSPANG00000018079SRSF77194.444Papio_anubis
ENSAMXG00000007005srsf7b6986.986ENSPKIG00000017425srsf7b6895.000Paramormyrops_kingsleyae
ENSAMXG00000007005srsf7b7084.459ENSPKIG00000022669SRSF78191.667Paramormyrops_kingsleyae
ENSAMXG00000007005srsf7b5573.043ENSPMGG00000021890srsf7a8073.874Periophthalmus_magnuspinnatus
ENSAMXG00000007005srsf7b5793.333ENSPEMG00000015449Srsf75093.333Peromyscus_maniculatus_bairdii
ENSAMXG00000007005srsf7b6468.276ENSPMAG00000004472srsf7a5474.528Petromyzon_marinus
ENSAMXG00000007005srsf7b5794.167ENSPCIG00000020694-8894.167Phascolarctos_cinereus
ENSAMXG00000007005srsf7b5790.000ENSPCIG00000020726-8890.000Phascolarctos_cinereus
ENSAMXG00000007005srsf7b5474.336ENSPFOG00000017803srsf7a8464.091Poecilia_formosa
ENSAMXG00000007005srsf7b5886.885ENSPFOG00000008820srsf7b5286.667Poecilia_formosa
ENSAMXG00000007005srsf7b5886.885ENSPLAG00000023806srsf7b5286.667Poecilia_latipinna
ENSAMXG00000007005srsf7b5475.221ENSPLAG00000004839srsf7a8964.545Poecilia_latipinna
ENSAMXG00000007005srsf7b5474.336ENSPMEG00000002757srsf7a8964.091Poecilia_mexicana
ENSAMXG00000007005srsf7b6554.348ENSPREG00000002610-6271.579Poecilia_reticulata
ENSAMXG00000007005srsf7b5886.885ENSPREG00000006149srsf7b5586.667Poecilia_reticulata
ENSAMXG00000007005srsf7b6073.228ENSPREG00000020685srsf7a9074.138Poecilia_reticulata
ENSAMXG00000007005srsf7b5693.277ENSPPYG00000012480SRSF75093.333Pongo_abelii
ENSAMXG00000007005srsf7b5793.333ENSPCAG00000011348SRSF75293.333Procavia_capensis
ENSAMXG00000007005srsf7b5881.148ENSPCOG00000023721-7680.833Propithecus_coquereli
ENSAMXG00000007005srsf7b5691.597ENSPCOG00000019422-5691.667Propithecus_coquereli
ENSAMXG00000007005srsf7b5693.277ENSPVAG00000012076SRSF75293.277Pteropus_vampyrus
ENSAMXG00000007005srsf7b5798.333ENSPNAG00000012546srsf7b10087.917Pygocentrus_nattereri
ENSAMXG00000007005srsf7b8272.000ENSRNOG00000008398AABR07055789.17282.500Rattus_norvegicus
ENSAMXG00000007005srsf7b5793.333ENSRNOG00000027360Srsf75093.333Rattus_norvegicus
ENSAMXG00000007005srsf7b5295.455ENSRBIG00000024695SRSF79080.087Rhinopithecus_bieti
ENSAMXG00000007005srsf7b5793.333ENSRROG00000005080SRSF78893.333Rhinopithecus_roxellana
ENSAMXG00000007005srsf7b5793.333ENSSBOG00000025074SRSF78893.333Saimiri_boliviensis_boliviensis
ENSAMXG00000007005srsf7b5396.396ENSSHAG00000015970-8096.396Sarcophilus_harrisii
ENSAMXG00000007005srsf7b5689.916ENSSHAG00000004597-10073.750Sarcophilus_harrisii
ENSAMXG00000007005srsf7b5872.358ENSSFOG00015006796-8054.502Scleropages_formosus
ENSAMXG00000007005srsf7b5793.333ENSSFOG00015007348SRSF710074.167Scleropages_formosus
ENSAMXG00000007005srsf7b5794.167ENSSFOG00015021911srsf7b10076.587Scleropages_formosus
ENSAMXG00000007005srsf7b5575.214ENSSMAG00000019286srsf7a8661.574Scophthalmus_maximus
ENSAMXG00000007005srsf7b8279.769ENSSDUG00000021338srsf7b8490.000Seriola_dumerili
ENSAMXG00000007005srsf7b8286.207ENSSLDG00000021463srsf7b6891.667Seriola_lalandi_dorsalis
ENSAMXG00000007005srsf7b5872.358ENSSPAG00000022192srsf7a9173.276Stegastes_partitus
ENSAMXG00000007005srsf7b5891.803ENSSPAG00000017204srsf7b8591.667Stegastes_partitus
ENSAMXG00000007005srsf7b5793.333ENSSSCG00000008484SRSF78893.333Sus_scrofa
ENSAMXG00000007005srsf7b5791.667ENSTGUG00000002095SRSF710078.000Taeniopygia_guttata
ENSAMXG00000007005srsf7b5790.833ENSTGUG00000002080-5090.833Taeniopygia_guttata
ENSAMXG00000007005srsf7b5474.336ENSTRUG00000010529srsf7a5172.358Takifugu_rubripes
ENSAMXG00000007005srsf7b5573.504ENSTNIG00000014279srsf7a5768.345Tetraodon_nigroviridis
ENSAMXG00000007005srsf7b5290.000ENSTTRG00000014324SRSF75090.000Tursiops_truncatus
ENSAMXG00000007005srsf7b5793.333ENSUAMG00000025051-8893.333Ursus_americanus
ENSAMXG00000007005srsf7b5793.333ENSUMAG00000013534SRSF75093.333Ursus_maritimus
ENSAMXG00000007005srsf7b5168.519ENSUMAG00000023107-6179.661Ursus_maritimus
ENSAMXG00000007005srsf7b5793.333ENSVVUG00000018767-8893.333Vulpes_vulpes
ENSAMXG00000007005srsf7b6760.140ENSVVUG00000006092-6969.444Vulpes_vulpes
ENSAMXG00000007005srsf7b5791.667ENSXETG00000025300srsf79978.970Xenopus_tropicalis
ENSAMXG00000007005srsf7b6073.228ENSXCOG00000009381srsf7a9073.276Xiphophorus_couchianus
ENSAMXG00000007005srsf7b5986.400ENSXCOG00000010843srsf7b8286.667Xiphophorus_couchianus
ENSAMXG00000007005srsf7b6754.610ENSXCOG00000008757-5871.579Xiphophorus_couchianus
ENSAMXG00000007005srsf7b5474.336ENSXMAG00000003050srsf7a8963.636Xiphophorus_maculatus
ENSAMXG00000007005srsf7b6554.348ENSXMAG00000015454-5871.579Xiphophorus_maculatus

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