EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000007054 (Gene tree)
Gene ID: 103031183
Gene Symbol: -
Alias: -
Full Name: RNA binding motif protein X-linked 2
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 5672 bases
Position: chr14:17807709-17813380
Accession: 103031183
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000028541	RRM_1	PF00076.22	5.3e-19	1	1
ENSAMXP00000007249	RRM_1	PF00076.22	6.1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000007249	-	1466	XM_007244440	ENSAMXP00000007249	386 (aa)	XP_007244502	W5KI37
ENSAMXT00000048197	-	1068	-	ENSAMXP00000028541	355 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000007054's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000007054's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000007054	-	99	59.012	ENSELUG00000006074	-	56	75.771	Esox_lucius
ENSAMXG00000007054	-	87	54.693	ENSFALG00000011572	-	72	66.204	Ficedula_albicollis
ENSAMXG00000007054	-	60	70.168	ENSLBEG00000005286	-	68	72.269	Labrus_bergylta
ENSAMXG00000007054	-	66	61.265	ENSLACG00000006906	-	57	71.366	Latimeria_chalumnae
ENSAMXG00000007054	-	55	75.472	ENSNBRG00000016432	-	98	59.797	Neolamprologus_brichardi
ENSAMXG00000007054	-	57	74.272	ENSONIG00000013963	-	75	73.305	Oreochromis_niloticus
ENSAMXG00000007054	-	57	74.661	ENSPFOG00000022525	-	95	66.816	Poecilia_formosa
ENSAMXG00000007054	-	100	69.077	ENSPNAG00000015725	-	100	71.040	Pygocentrus_nattereri
ENSAMXG00000007054	-	60	66.968	ENSXCOG00000018353	-	70	69.154	Xiphophorus_couchianus
ENSAMXG00000007054	-	65	65.289	ENSXMAG00000027266	-	72	73.182	Xiphophorus_maculatus