EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000007275 (Gene tree)
Gene ID: 103042677
Gene Symbol: sart1
Alias: zgc:91927
Full Name: spliceosome associated factor 1%2C recruiter of U4/U6.U5 tri-snRNP
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 6991 bases
Position: chr14:18613881-18620871
Accession: 103042677
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000007474	SART-1	PF03343.13	2.6e-150	1	1
ENSAMXP00000053981	SART-1	PF03343.13	1.6e-142	1	1
ENSAMXP00000035838	SART-1	PF03343.13	1.8e-127	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000055709	-	2313	-	ENSAMXP00000053981	770 (aa)	-	-
ENSAMXT00000007474	-	2351	XM_007244481	ENSAMXP00000007474	782 (aa)	XP_007244543	W5KIR2
ENSAMXT00000057674	-	2402	-	ENSAMXP00000035838	748 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000007275's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000007275's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000007275	sart1	100	79.974	ENSAPOG00000017256	sart1	100	80.230	Acanthochromis_polyacanthus
ENSAMXG00000007275	sart1	100	79.847	ENSAOCG00000002873	sart1	100	80.357	Amphiprion_ocellaris
ENSAMXG00000007275	sart1	100	79.719	ENSAPEG00000002705	sart1	100	80.230	Amphiprion_percula
ENSAMXG00000007275	sart1	100	78.471	ENSATEG00000010608	sart1	100	78.344	Anabas_testudineus
ENSAMXG00000007275	sart1	100	77.001	ENSCSEG00000001968	sart1	100	77.313	Cynoglossus_semilaevis
ENSAMXG00000007275	sart1	92	84.276	ENSDARG00000005945	sart1	100	82.143	Danio_rerio
ENSAMXG00000007275	sart1	100	79.975	ENSELUG00000015791	sart1	100	79.822	Esox_lucius
ENSAMXG00000007275	sart1	100	81.401	ENSMAMG00000012486	sart1	100	81.656	Mastacembelus_armatus
ENSAMXG00000007275	sart1	100	79.135	ENSMALG00000018262	sart1	100	79.262	Monopterus_albus
ENSAMXG00000007275	sart1	100	78.653	ENSPKIG00000023523	sart1	100	78.145	Paramormyrops_kingsleyae
ENSAMXG00000007275	sart1	100	87.516	ENSPNAG00000002187	sart1	100	87.898	Pygocentrus_nattereri