EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000007295 (Gene tree)
Gene ID: 103024837
Gene Symbol: mrm1 (1 of many)
Alias: si:dkey-189h5.1
Full Name: rRNA methyltransferase 1%2C mitochondrial
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 6655 bases
Position: chrAPWO02001683.1:11123-17777
Accession: 103024837
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000053817	SpoU_sub_bind	PF08032.12	1.9e-15	1	1
ENSAMXP00000007500	SpoU_sub_bind	PF08032.12	2e-15	1	1
ENSAMXP00000037741	SpoU_sub_bind	PF08032.12	2.2e-15	1	1
ENSAMXP00000007500	SpoU_methylase	PF00588.19	3.1e-28	1	1
ENSAMXP00000037741	SpoU_methylase	PF00588.19	9.4e-27	1	1
ENSAMXP00000053817	SpoU_methylase	PF00588.19	1.2e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000007500	-	2094	XM_007245209	ENSAMXP00000007500	401 (aa)	XP_007245271	W5KIT8
ENSAMXT00000047737	-	2995	-	ENSAMXP00000037741	424 (aa)	-	UPI000440C2DC
ENSAMXT00000038242	-	2305	-	ENSAMXP00000053817	407 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000007295's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000007295's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000007295	mrm1	100	100.000	ENSAMXG00000030596	mrm1	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000007295	mrm1	63	44.186	ENSG00000278619	MRM1	91	36.111	Homo_sapiens
ENSAMXG00000007295	mrm1	81	52.601	ENSAPOG00000016309	mrm1	85	52.601	Acanthochromis_polyacanthus
ENSAMXG00000007295	mrm1	71	41.438	ENSAMEG00000008301	MRM1	79	41.438	Ailuropoda_melanoleuca
ENSAMXG00000007295	mrm1	74	57.239	ENSACIG00000012244	mrm1	74	57.239	Amphilophus_citrinellus
ENSAMXG00000007295	mrm1	74	58.923	ENSAOCG00000000362	mrm1	72	58.923	Amphiprion_ocellaris
ENSAMXG00000007295	mrm1	74	59.596	ENSAPEG00000004511	mrm1	72	59.596	Amphiprion_percula
ENSAMXG00000007295	mrm1	63	51.953	ENSAPLG00000006433	MRM1	82	52.734	Anas_platyrhynchos
ENSAMXG00000007295	mrm1	63	46.332	ENSACAG00000002573	MRM1	81	46.332	Anolis_carolinensis
ENSAMXG00000007295	mrm1	81	40.000	ENSANAG00000025500	MRM1	85	40.000	Aotus_nancymaae
ENSAMXG00000007295	mrm1	72	56.944	ENSACLG00000023745	mrm1	98	57.667	Astatotilapia_calliptera
ENSAMXG00000007295	mrm1	71	43.003	ENSBTAG00000010311	MRM1	80	42.808	Bos_taurus
ENSAMXG00000007295	mrm1	81	38.922	ENSCJAG00000001023	MRM1	88	36.628	Callithrix_jacchus
ENSAMXG00000007295	mrm1	74	42.000	ENSCAFG00000017849	MRM1	82	42.000	Canis_familiaris
ENSAMXG00000007295	mrm1	74	41.333	ENSCAFG00020002377	MRM1	82	41.333	Canis_lupus_dingo
ENSAMXG00000007295	mrm1	70	44.097	ENSCHIG00000008558	MRM1	79	44.097	Capra_hircus
ENSAMXG00000007295	mrm1	80	37.176	ENSTSYG00000036380	MRM1	88	37.176	Carlito_syrichta
ENSAMXG00000007295	mrm1	70	42.160	ENSCPOG00000004283	MRM1	82	39.394	Cavia_porcellus
ENSAMXG00000007295	mrm1	81	39.577	ENSCCAG00000020032	MRM1	94	36.565	Cebus_capucinus
ENSAMXG00000007295	mrm1	63	44.656	ENSCATG00000041516	MRM1	82	40.753	Cercocebus_atys
ENSAMXG00000007295	mrm1	75	41.290	ENSCLAG00000010960	MRM1	92	37.982	Chinchilla_lanigera
ENSAMXG00000007295	mrm1	63	44.275	ENSCSAG00000006055	MRM1	82	40.411	Chlorocebus_sabaeus
ENSAMXG00000007295	mrm1	60	47.347	ENSCPBG00000009581	MRM1	53	47.347	Chrysemys_picta_bellii
ENSAMXG00000007295	mrm1	63	43.411	ENSCANG00000025543	MRM1	82	40.411	Colobus_angolensis_palliatus
ENSAMXG00000007295	mrm1	76	41.853	ENSCGRG00001001937	Mrm1	92	40.308	Cricetulus_griseus_chok1gshd
ENSAMXG00000007295	mrm1	76	41.853	ENSCGRG00000009593	Mrm1	92	40.308	Cricetulus_griseus_crigri
ENSAMXG00000007295	mrm1	74	56.081	ENSCSEG00000014575	mrm1	77	56.081	Cynoglossus_semilaevis
ENSAMXG00000007295	mrm1	74	56.419	ENSCVAG00000012104	mrm1	75	56.081	Cyprinodon_variegatus
ENSAMXG00000007295	mrm1	71	36.111	ENSDNOG00000035159	MRM1	79	36.111	Dasypus_novemcinctus
ENSAMXG00000007295	mrm1	53	46.083	ENSDORG00000013267	Mrm1	92	46.083	Dipodomys_ordii
ENSAMXG00000007295	mrm1	60	36.255	ENSETEG00000000378	MRM1	93	36.400	Echinops_telfairi
ENSAMXG00000007295	mrm1	70	44.097	ENSEASG00005002123	MRM1	79	44.097	Equus_asinus_asinus
ENSAMXG00000007295	mrm1	70	44.097	ENSECAG00000025139	MRM1	79	44.097	Equus_caballus
ENSAMXG00000007295	mrm1	77	59.105	ENSELUG00000012392	mrm1	70	59.105	Esox_lucius
ENSAMXG00000007295	mrm1	75	40.645	ENSFCAG00000031667	MRM1	85	40.645	Felis_catus
ENSAMXG00000007295	mrm1	52	47.393	ENSFDAG00000018545	MRM1	71	47.393	Fukomys_damarensis
ENSAMXG00000007295	mrm1	75	54.000	ENSFHEG00000005529	mrm1	79	55.000	Fundulus_heteroclitus
ENSAMXG00000007295	mrm1	61	50.806	ENSGALG00000039523	MRM1	98	50.806	Gallus_gallus
ENSAMXG00000007295	mrm1	73	55.102	ENSGAFG00000012959	mrm1	77	55.102	Gambusia_affinis
ENSAMXG00000007295	mrm1	64	62.791	ENSGACG00000004024	mrm1	98	62.791	Gasterosteus_aculeatus
ENSAMXG00000007295	mrm1	74	43.243	ENSGAGG00000000908	MRM1	73	43.243	Gopherus_agassizii
ENSAMXG00000007295	mrm1	63	44.186	ENSGGOG00000007979	MRM1	82	39.931	Gorilla_gorilla
ENSAMXG00000007295	mrm1	72	56.597	ENSHBUG00000004484	mrm1	97	57.912	Haplochromis_burtoni
ENSAMXG00000007295	mrm1	70	41.958	ENSHGLG00000008701	MRM1	87	38.585	Heterocephalus_glaber_female
ENSAMXG00000007295	mrm1	53	46.512	ENSHGLG00100012646	MRM1	73	46.512	Heterocephalus_glaber_male
ENSAMXG00000007295	mrm1	74	55.705	ENSHCOG00000003665	mrm1	80	55.705	Hippocampus_comes
ENSAMXG00000007295	mrm1	96	56.522	ENSIPUG00000022357	mrm1	98	56.777	Ictalurus_punctatus
ENSAMXG00000007295	mrm1	70	41.667	ENSSTOG00000002422	MRM1	84	42.014	Ictidomys_tridecemlineatus
ENSAMXG00000007295	mrm1	70	43.007	ENSJJAG00000010068	Mrm1	94	43.007	Jaculus_jaculus
ENSAMXG00000007295	mrm1	74	58.054	ENSLBEG00000009581	mrm1	97	58.054	Labrus_bergylta
ENSAMXG00000007295	mrm1	65	46.816	ENSLACG00000017664	MRM1	91	46.816	Latimeria_chalumnae
ENSAMXG00000007295	mrm1	75	54.754	ENSLOCG00000004945	mrm1	94	54.754	Lepisosteus_oculatus
ENSAMXG00000007295	mrm1	70	42.857	ENSLAFG00000012584	MRM1	86	42.857	Loxodonta_africana
ENSAMXG00000007295	mrm1	63	44.656	ENSMFAG00000032112	MRM1	77	41.912	Macaca_fascicularis
ENSAMXG00000007295	mrm1	63	44.186	ENSMMUG00000000622	MRM1	79	40.580	Macaca_mulatta
ENSAMXG00000007295	mrm1	63	43.798	ENSMNEG00000044557	MRM1	77	41.045	Macaca_nemestrina
ENSAMXG00000007295	mrm1	63	44.656	ENSMLEG00000031933	MRM1	82	40.753	Mandrillus_leucophaeus
ENSAMXG00000007295	mrm1	72	56.944	ENSMAMG00000007018	mrm1	95	57.912	Mastacembelus_armatus
ENSAMXG00000007295	mrm1	72	56.944	ENSMZEG00005008320	mrm1	98	57.667	Maylandia_zebra
ENSAMXG00000007295	mrm1	81	40.597	ENSMAUG00000020976	Mrm1	96	38.953	Mesocricetus_auratus
ENSAMXG00000007295	mrm1	80	39.755	ENSMICG00000004216	MRM1	91	39.755	Microcebus_murinus
ENSAMXG00000007295	mrm1	73	56.623	ENSMMOG00000001468	mrm1	86	56.623	Mola_mola
ENSAMXG00000007295	mrm1	63	44.944	ENSMODG00000003307	MRM1	61	44.944	Monodelphis_domestica
ENSAMXG00000007295	mrm1	72	57.045	ENSMALG00000014364	mrm1	93	57.912	Monopterus_albus
ENSAMXG00000007295	mrm1	70	42.612	MGP_CAROLIEiJ_G0016896	Mrm1	88	42.612	Mus_caroli
ENSAMXG00000007295	mrm1	71	42.414	ENSMUSG00000018405	Mrm1	88	42.662	Mus_musculus
ENSAMXG00000007295	mrm1	71	42.069	MGP_PahariEiJ_G0018026	Mrm1	88	42.321	Mus_pahari
ENSAMXG00000007295	mrm1	71	42.662	MGP_SPRETEiJ_G0017741	Mrm1	88	42.662	Mus_spretus
ENSAMXG00000007295	mrm1	66	44.322	ENSMPUG00000015063	MRM1	80	43.003	Mustela_putorius_furo
ENSAMXG00000007295	mrm1	71	40.753	ENSMLUG00000013208	MRM1	81	40.753	Myotis_lucifugus
ENSAMXG00000007295	mrm1	70	42.308	ENSNGAG00000019175	Mrm1	86	42.308	Nannospalax_galili
ENSAMXG00000007295	mrm1	72	56.597	ENSNBRG00000023533	mrm1	98	57.333	Neolamprologus_brichardi
ENSAMXG00000007295	mrm1	63	43.798	ENSNLEG00000002300	MRM1	82	40.753	Nomascus_leucogenys
ENSAMXG00000007295	mrm1	70	41.343	ENSOPRG00000012866	MRM1	81	41.343	Ochotona_princeps
ENSAMXG00000007295	mrm1	71	57.143	ENSONIG00000021236	mrm1	99	57.860	Oreochromis_niloticus
ENSAMXG00000007295	mrm1	70	41.667	ENSOCUG00000012149	MRM1	78	42.014	Oryctolagus_cuniculus
ENSAMXG00000007295	mrm1	75	54.515	ENSORLG00000025876	mrm1	95	54.515	Oryzias_latipes
ENSAMXG00000007295	mrm1	74	54.545	ENSORLG00020021701	mrm1	94	54.545	Oryzias_latipes_hni
ENSAMXG00000007295	mrm1	74	55.219	ENSORLG00015020702	mrm1	94	55.219	Oryzias_latipes_hsok
ENSAMXG00000007295	mrm1	74	55.405	ENSOMEG00000003504	mrm1	94	55.405	Oryzias_melastigma
ENSAMXG00000007295	mrm1	71	41.034	ENSOGAG00000013785	MRM1	90	41.034	Otolemur_garnettii
ENSAMXG00000007295	mrm1	70	43.448	ENSOARG00000018616	MRM1	79	43.448	Ovis_aries
ENSAMXG00000007295	mrm1	63	45.038	ENSPPAG00000043135	MRM1	77	42.279	Pan_paniscus
ENSAMXG00000007295	mrm1	75	40.968	ENSPPRG00000023620	MRM1	85	40.968	Panthera_pardus
ENSAMXG00000007295	mrm1	64	44.106	ENSPTIG00000009829	MRM1	91	44.106	Panthera_tigris_altaica
ENSAMXG00000007295	mrm1	63	44.186	ENSPTRG00000009049	MRM1	76	42.279	Pan_troglodytes
ENSAMXG00000007295	mrm1	63	44.186	ENSPANG00000022126	MRM1	82	40.278	Papio_anubis
ENSAMXG00000007295	mrm1	76	57.792	ENSPKIG00000007654	mrm1	81	57.792	Paramormyrops_kingsleyae
ENSAMXG00000007295	mrm1	64	46.360	ENSPSIG00000017622	MRM1	93	46.360	Pelodiscus_sinensis
ENSAMXG00000007295	mrm1	75	53.896	ENSPMGG00000003905	mrm1	89	53.896	Periophthalmus_magnuspinnatus
ENSAMXG00000007295	mrm1	51	39.269	ENSPMAG00000000484	mrm1	100	39.269	Petromyzon_marinus
ENSAMXG00000007295	mrm1	65	44.528	ENSPCIG00000003352	MRM1	69	45.489	Phascolarctos_cinereus
ENSAMXG00000007295	mrm1	73	50.680	ENSPFOG00000018234	mrm1	70	50.680	Poecilia_formosa
ENSAMXG00000007295	mrm1	73	55.782	ENSPLAG00000020759	mrm1	72	55.782	Poecilia_latipinna
ENSAMXG00000007295	mrm1	73	55.442	ENSPMEG00000021744	mrm1	72	55.442	Poecilia_mexicana
ENSAMXG00000007295	mrm1	73	54.762	ENSPREG00000013224	mrm1	77	54.762	Poecilia_reticulata
ENSAMXG00000007295	mrm1	70	36.552	ENSPCAG00000011756	MRM1	81	36.552	Procavia_capensis
ENSAMXG00000007295	mrm1	80	40.122	ENSPCOG00000020871	MRM1	91	40.122	Propithecus_coquereli
ENSAMXG00000007295	mrm1	71	35.862	ENSPVAG00000011626	MRM1	79	35.862	Pteropus_vampyrus
ENSAMXG00000007295	mrm1	72	56.944	ENSPNYG00000000528	mrm1	97	58.249	Pundamilia_nyererei
ENSAMXG00000007295	mrm1	99	66.667	ENSPNAG00000014551	mrm1	98	66.667	Pygocentrus_nattereri
ENSAMXG00000007295	mrm1	71	43.003	ENSRNOG00000027901	Mrm1	88	43.003	Rattus_norvegicus
ENSAMXG00000007295	mrm1	63	44.275	ENSRBIG00000040494	MRM1	88	38.199	Rhinopithecus_bieti
ENSAMXG00000007295	mrm1	67	40.502	ENSRROG00000041704	MRM1	83	39.073	Rhinopithecus_roxellana
ENSAMXG00000007295	mrm1	79	40.244	ENSSBOG00000024145	MRM1	92	37.151	Saimiri_boliviensis_boliviensis
ENSAMXG00000007295	mrm1	80	56.037	ENSSFOG00015022117	mrm1	80	56.037	Scleropages_formosus
ENSAMXG00000007295	mrm1	74	55.743	ENSSMAG00000009657	mrm1	95	55.743	Scophthalmus_maximus
ENSAMXG00000007295	mrm1	91	51.309	ENSSDUG00000009089	mrm1	93	51.309	Seriola_dumerili
ENSAMXG00000007295	mrm1	74	60.133	ENSSLDG00000024141	mrm1	83	60.133	Seriola_lalandi_dorsalis
ENSAMXG00000007295	mrm1	73	45.333	ENSSPUG00000000265	MRM1	74	45.333	Sphenodon_punctatus
ENSAMXG00000007295	mrm1	63	43.462	ENSSSCG00000017691	MRM1	82	40.065	Sus_scrofa
ENSAMXG00000007295	mrm1	74	55.892	ENSTRUG00000011737	mrm1	77	55.892	Takifugu_rubripes
ENSAMXG00000007295	mrm1	74	56.566	ENSTNIG00000010088	mrm1	80	56.566	Tetraodon_nigroviridis
ENSAMXG00000007295	mrm1	71	40.136	ENSTTRG00000011984	MRM1	80	40.136	Tursiops_truncatus
ENSAMXG00000007295	mrm1	71	46.552	ENSUAMG00000023152	MRM1	87	41.429	Ursus_americanus
ENSAMXG00000007295	mrm1	70	42.808	ENSVVUG00000018420	MRM1	68	42.808	Vulpes_vulpes
ENSAMXG00000007295	mrm1	78	52.978	ENSXCOG00000003622	mrm1	86	52.978	Xiphophorus_couchianus
ENSAMXG00000007295	mrm1	78	53.797	ENSXMAG00000014890	mrm1	83	53.797	Xiphophorus_maculatus