EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000007315 (Gene tree)
Gene ID: 111197013
Gene Symbol: -
Alias: -
Full Name: nuclear GTPase SLIP-GC-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 49519 bases
Position: chrAPWO02000694.1:185517-235035
Accession: 111197013
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000047103	MMR_HSR1	PF01926.23	2.3e-06	1	1
ENSAMXP00000007519	MMR_HSR1	PF01926.23	2.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000042268	-	3793	XM_022686410	ENSAMXP00000047103	749 (aa)	XP_022542131	UPI000BBDD1B0
ENSAMXT00000007519	-	2449	-	ENSAMXP00000007519	754 (aa)	-	W5KIV7

Gene Model

Click here to download ENSAMXG00000007315's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000007315's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000007315	-	90	85.355	ENSAMXG00000035650	-	96	85.355

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000007315	-	67	39.658	ENSAPEG00000007463	-	75	39.544	Amphiprion_percula
ENSAMXG00000007315	-	85	40.000	ENSAPEG00000008962	-	80	40.000	Amphiprion_percula
ENSAMXG00000007315	-	85	39.785	ENSAPEG00000007405	-	77	39.785	Amphiprion_percula
ENSAMXG00000007315	-	89	38.439	ENSATEG00000024350	-	95	38.839	Anabas_testudineus
ENSAMXG00000007315	-	86	38.045	ENSACLG00000027781	-	77	38.195	Astatotilapia_calliptera
ENSAMXG00000007315	-	79	36.738	ENSACLG00000027785	-	92	35.963	Astatotilapia_calliptera
ENSAMXG00000007315	-	90	35.942	ENSACLG00000027749	-	97	35.942	Astatotilapia_calliptera
ENSAMXG00000007315	-	60	38.767	ENSACLG00000009378	-	82	39.121	Astatotilapia_calliptera
ENSAMXG00000007315	-	90	37.263	ENSACLG00000027743	-	80	37.263	Astatotilapia_calliptera
ENSAMXG00000007315	-	92	37.037	ENSACLG00000027763	-	88	37.037	Astatotilapia_calliptera
ENSAMXG00000007315	-	87	37.575	ENSACLG00000027770	-	83	37.575	Astatotilapia_calliptera
ENSAMXG00000007315	-	96	39.569	ENSELUG00000016238	-	77	39.569	Esox_lucius
ENSAMXG00000007315	-	92	38.223	ENSELUG00000016324	-	80	38.223	Esox_lucius
ENSAMXG00000007315	-	86	39.697	ENSELUG00000016154	-	74	39.697	Esox_lucius
ENSAMXG00000007315	-	81	30.346	ENSFCAG00000002892	NUGGC	77	30.346	Felis_catus
ENSAMXG00000007315	-	74	36.931	ENSGACG00000011412	-	87	37.099	Gasterosteus_aculeatus
ENSAMXG00000007315	-	82	34.049	ENSLBEG00000027088	-	91	34.202	Labrus_bergylta
ENSAMXG00000007315	-	75	38.475	ENSLBEG00000025738	-	91	38.475	Labrus_bergylta
ENSAMXG00000007315	-	89	35.578	ENSLOCG00000002868	-	98	35.578	Lepisosteus_oculatus
ENSAMXG00000007315	-	53	39.803	ENSMAMG00000023343	-	64	40.191	Mastacembelus_armatus
ENSAMXG00000007315	-	89	37.645	ENSMZEG00005004230	-	75	38.009	Maylandia_zebra
ENSAMXG00000007315	-	88	36.741	ENSMZEG00005023437	-	95	37.075	Maylandia_zebra
ENSAMXG00000007315	-	89	37.113	ENSMZEG00005023434	-	77	37.113	Maylandia_zebra
ENSAMXG00000007315	-	92	35.613	ENSMZEG00005023384	-	81	35.613	Maylandia_zebra
ENSAMXG00000007315	-	89	36.819	ENSMZEG00005004202	-	88	37.059	Maylandia_zebra
ENSAMXG00000007315	-	90	37.226	ENSMZEG00005023374	-	85	37.226	Maylandia_zebra
ENSAMXG00000007315	-	89	37.097	ENSMZEG00005026592	-	96	37.482	Maylandia_zebra
ENSAMXG00000007315	-	68	34.746	ENSMAUG00000014486	Nuggc	73	34.746	Mesocricetus_auratus
ENSAMXG00000007315	-	81	35.837	ENSONIG00000012332	-	99	35.837	Oreochromis_niloticus
ENSAMXG00000007315	-	84	39.097	ENSONIG00000017112	-	98	39.286	Oreochromis_niloticus
ENSAMXG00000007315	-	81	33.121	ENSONIG00000015367	-	99	33.121	Oreochromis_niloticus
ENSAMXG00000007315	-	96	35.772	ENSONIG00000005156	-	99	38.208	Oreochromis_niloticus
ENSAMXG00000007315	-	91	37.787	ENSPFOG00000006073	-	81	37.787	Poecilia_formosa
ENSAMXG00000007315	-	86	36.677	ENSPLAG00000016480	-	79	36.603	Poecilia_latipinna
ENSAMXG00000007315	-	86	36.596	ENSPMEG00000014636	-	96	36.611	Poecilia_mexicana
ENSAMXG00000007315	-	66	39.726	ENSPREG00000009634	-	75	39.726	Poecilia_reticulata
ENSAMXG00000007315	-	70	39.444	ENSPREG00000007347	-	91	38.998	Poecilia_reticulata
ENSAMXG00000007315	-	92	37.006	ENSPNYG00000002532	-	88	37.006	Pundamilia_nyererei
ENSAMXG00000007315	-	100	55.204	ENSPNAG00000003204	-	99	55.204	Pygocentrus_nattereri
ENSAMXG00000007315	-	87	36.804	ENSSFOG00015023994	-	73	36.804	Scleropages_formosus
ENSAMXG00000007315	-	87	37.781	ENSSMAG00000015947	nuggc.3	77	37.931	Scophthalmus_maximus
ENSAMXG00000007315	-	69	36.643	ENSSDUG00000010293	-	82	36.643	Seriola_dumerili
ENSAMXG00000007315	-	82	40.566	ENSSPAG00000014020	-	78	40.630	Stegastes_partitus
ENSAMXG00000007315	-	88	35.354	ENSSPAG00000013498	-	87	35.498	Stegastes_partitus