EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000007422 (Gene tree)
Gene ID: 103032472
Gene Symbol: apex2
Alias: zgc:55889
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 2
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 4658 bases
Position: chr6:7603096-7607753
Accession: 103032472
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000007628	Exo_endo_phos	PF03372.23	1.1e-16	1	1
ENSAMXP00000007627	Exo_endo_phos	PF03372.23	1.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000007628	-	1665	-	ENSAMXP00000007628	554 (aa)	-	W5KJ66
ENSAMXT00000007627	-	1737	XM_007231872	ENSAMXP00000007627	578 (aa)	XP_007231934	W5KJ65

Gene Model

Click here to download ENSAMXG00000007422's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000007422's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000007422	apex2	99	45.070	ENSG00000169188	APEX2	99	44.718	Homo_sapiens
ENSAMXG00000007422	apex2	100	64.675	ENSAPOG00000005805	apex2	100	65.026	Acanthochromis_polyacanthus
ENSAMXG00000007422	apex2	99	44.858	ENSAMEG00000003608	APEX2	99	44.681	Ailuropoda_melanoleuca
ENSAMXG00000007422	apex2	100	61.754	ENSACIG00000010000	apex2	100	61.996	Amphilophus_citrinellus
ENSAMXG00000007422	apex2	100	64.851	ENSAOCG00000021774	apex2	100	65.202	Amphiprion_ocellaris
ENSAMXG00000007422	apex2	100	62.872	ENSAPEG00000020890	apex2	94	65.202	Amphiprion_percula
ENSAMXG00000007422	apex2	100	62.045	ENSATEG00000023600	apex2	100	61.962	Anabas_testudineus
ENSAMXG00000007422	apex2	99	47.764	ENSACAG00000011201	APEX2	99	47.406	Anolis_carolinensis
ENSAMXG00000007422	apex2	99	45.423	ENSANAG00000021907	-	99	45.070	Aotus_nancymaae
ENSAMXG00000007422	apex2	97	40.860	ENSANAG00000020845	-	99	40.502	Aotus_nancymaae
ENSAMXG00000007422	apex2	99	45.841	ENSBTAG00000013177	APEX2	99	45.310	Bos_taurus
ENSAMXG00000007422	apex2	99	45.423	ENSCJAG00000016584	APEX2	99	45.070	Callithrix_jacchus
ENSAMXG00000007422	apex2	99	43.739	ENSCAFG00000014310	APEX2	99	43.463	Canis_familiaris
ENSAMXG00000007422	apex2	99	44.621	ENSCAFG00020013818	APEX2	93	57.143	Canis_lupus_dingo
ENSAMXG00000007422	apex2	99	45.922	ENSCHIG00000019916	APEX2	99	45.745	Capra_hircus
ENSAMXG00000007422	apex2	99	46.631	ENSTSYG00000005612	APEX2	99	46.277	Carlito_syrichta
ENSAMXG00000007422	apex2	99	46.004	ENSCPOG00000007265	APEX2	99	46.181	Cavia_porcellus
ENSAMXG00000007422	apex2	96	42.884	ENSCCAG00000025405	-	96	42.509	Cebus_capucinus
ENSAMXG00000007422	apex2	99	44.894	ENSCATG00000044854	APEX2	99	44.718	Cercocebus_atys
ENSAMXG00000007422	apex2	99	44.938	ENSCLAG00000017315	APEX2	99	44.938	Chinchilla_lanigera
ENSAMXG00000007422	apex2	99	45.246	ENSCSAG00000012124	APEX2	99	45.070	Chlorocebus_sabaeus
ENSAMXG00000007422	apex2	100	45.796	ENSCPBG00000016631	APEX2	99	46.154	Chrysemys_picta_bellii
ENSAMXG00000007422	apex2	75	54.545	ENSCSAVG00000006052	-	88	54.545	Ciona_savignyi
ENSAMXG00000007422	apex2	99	45.070	ENSCANG00000003053	APEX2	99	44.894	Colobus_angolensis_palliatus
ENSAMXG00000007422	apex2	99	46.018	ENSCGRG00001008132	Apex2	99	46.018	Cricetulus_griseus_chok1gshd
ENSAMXG00000007422	apex2	99	46.018	ENSCGRG00000009667	Apex2	89	60.369	Cricetulus_griseus_crigri
ENSAMXG00000007422	apex2	100	60.585	ENSCSEG00000019900	apex2	99	60.653	Cynoglossus_semilaevis
ENSAMXG00000007422	apex2	100	60.997	ENSCVAG00000021583	apex2	100	61.063	Cyprinodon_variegatus
ENSAMXG00000007422	apex2	100	65.371	ENSDARG00000008472	apex2	100	65.371	Danio_rerio
ENSAMXG00000007422	apex2	99	46.277	ENSDNOG00000038901	APEX2	99	46.099	Dasypus_novemcinctus
ENSAMXG00000007422	apex2	88	59.091	ENSEBUG00000015654	apex2	90	54.958	Eptatretus_burgeri
ENSAMXG00000007422	apex2	99	46.797	ENSEASG00005011694	APEX2	90	46.441	Equus_asinus_asinus
ENSAMXG00000007422	apex2	99	46.797	ENSECAG00000026921	APEX2	90	46.441	Equus_caballus
ENSAMXG00000007422	apex2	99	46.714	ENSEEUG00000013172	APEX2	99	46.479	Erinaceus_europaeus
ENSAMXG00000007422	apex2	100	60.980	ENSELUG00000021417	apex2	99	60.714	Esox_lucius
ENSAMXG00000007422	apex2	99	45.293	ENSFCAG00000021990	APEX2	99	44.974	Felis_catus
ENSAMXG00000007422	apex2	99	44.621	ENSFDAG00000008076	APEX2	90	60.377	Fukomys_damarensis
ENSAMXG00000007422	apex2	100	57.424	ENSFHEG00000021411	apex2	99	57.424	Fundulus_heteroclitus
ENSAMXG00000007422	apex2	76	73.118	ENSGMOG00000019681	apex2	100	73.118	Gadus_morhua
ENSAMXG00000007422	apex2	100	59.552	ENSGAFG00000005829	apex2	100	59.316	Gambusia_affinis
ENSAMXG00000007422	apex2	59	80.000	ENSGACG00000012307	apex2	82	78.212	Gasterosteus_aculeatus
ENSAMXG00000007422	apex2	90	43.654	ENSGAGG00000011520	APEX2	88	43.654	Gopherus_agassizii
ENSAMXG00000007422	apex2	99	45.775	ENSGGOG00000002056	APEX2	99	45.423	Gorilla_gorilla
ENSAMXG00000007422	apex2	100	63.899	ENSHBUG00000009938	apex2	100	63.899	Haplochromis_burtoni
ENSAMXG00000007422	apex2	99	45.804	ENSHGLG00000000273	APEX2	98	57.391	Heterocephalus_glaber_female
ENSAMXG00000007422	apex2	100	60.971	ENSHCOG00000010165	apex2	100	60.791	Hippocampus_comes
ENSAMXG00000007422	apex2	100	69.646	ENSIPUG00000000352	APEX2	100	69.309	Ictalurus_punctatus
ENSAMXG00000007422	apex2	99	45.105	ENSSTOG00000025121	APEX2	85	62.019	Ictidomys_tridecemlineatus
ENSAMXG00000007422	apex2	99	45.907	ENSJJAG00000019611	Apex2	99	58.952	Jaculus_jaculus
ENSAMXG00000007422	apex2	100	61.972	ENSKMAG00000006985	apex2	100	61.972	Kryptolebias_marmoratus
ENSAMXG00000007422	apex2	100	62.069	ENSLBEG00000012139	apex2	100	61.618	Labrus_bergylta
ENSAMXG00000007422	apex2	100	51.418	ENSLACG00000000865	APEX2	100	50.438	Latimeria_chalumnae
ENSAMXG00000007422	apex2	100	59.691	ENSLOCG00000014467	apex2	100	60.627	Lepisosteus_oculatus
ENSAMXG00000007422	apex2	99	45.534	ENSLAFG00000018312	APEX2	99	45.184	Loxodonta_africana
ENSAMXG00000007422	apex2	99	45.150	ENSMFAG00000002486	APEX2	99	44.974	Macaca_fascicularis
ENSAMXG00000007422	apex2	99	44.974	ENSMMUG00000008428	APEX2	99	44.797	Macaca_mulatta
ENSAMXG00000007422	apex2	99	44.797	ENSMNEG00000036783	APEX2	99	44.797	Macaca_nemestrina
ENSAMXG00000007422	apex2	99	44.894	ENSMLEG00000028208	APEX2	99	44.718	Mandrillus_leucophaeus
ENSAMXG00000007422	apex2	100	60.906	ENSMAMG00000024220	apex2	100	60.906	Mastacembelus_armatus
ENSAMXG00000007422	apex2	100	63.899	ENSMZEG00005026322	apex2	100	63.899	Maylandia_zebra
ENSAMXG00000007422	apex2	99	44.346	ENSMICG00000043181	APEX2	99	43.706	Microcebus_murinus
ENSAMXG00000007422	apex2	99	46.359	ENSMOCG00000004339	Apex2	91	60.369	Microtus_ochrogaster
ENSAMXG00000007422	apex2	100	61.765	ENSMMOG00000017340	apex2	100	61.831	Mola_mola
ENSAMXG00000007422	apex2	99	50.991	ENSMODG00000005341	APEX2	87	67.164	Monodelphis_domestica
ENSAMXG00000007422	apex2	100	59.593	ENSMALG00000014179	apex2	100	59.932	Monopterus_albus
ENSAMXG00000007422	apex2	99	45.018	MGP_CAROLIEiJ_G0033484	Apex2	98	51.625	Mus_caroli
ENSAMXG00000007422	apex2	99	45.070	ENSMUSG00000025269	Apex2	98	51.087	Mus_musculus
ENSAMXG00000007422	apex2	99	44.894	MGP_PahariEiJ_G0032023	Apex2	92	61.836	Mus_pahari
ENSAMXG00000007422	apex2	99	44.718	MGP_SPRETEiJ_G0034654	Apex2	98	51.625	Mus_spretus
ENSAMXG00000007422	apex2	99	46.181	ENSMPUG00000003293	APEX2	99	45.826	Mustela_putorius_furo
ENSAMXG00000007422	apex2	99	45.179	ENSMLUG00000004562	-	99	44.821	Myotis_lucifugus
ENSAMXG00000007422	apex2	99	45.357	ENSMLUG00000016298	-	99	45.179	Myotis_lucifugus
ENSAMXG00000007422	apex2	99	44.974	ENSNGAG00000013576	Apex2	99	44.406	Nannospalax_galili
ENSAMXG00000007422	apex2	100	62.129	ENSNBRG00000010099	apex2	100	62.129	Neolamprologus_brichardi
ENSAMXG00000007422	apex2	71	52.985	ENSNLEG00000032067	-	91	52.985	Nomascus_leucogenys
ENSAMXG00000007422	apex2	99	63.653	ENSONIG00000016881	apex2	99	63.472	Oreochromis_niloticus
ENSAMXG00000007422	apex2	93	52.713	ENSOANG00000000689	-	96	52.326	Ornithorhynchus_anatinus
ENSAMXG00000007422	apex2	99	39.826	ENSOCUG00000000570	APEX2	99	39.304	Oryctolagus_cuniculus
ENSAMXG00000007422	apex2	100	61.444	ENSORLG00000014053	apex2	100	60.984	Oryzias_latipes
ENSAMXG00000007422	apex2	100	60.317	ENSORLG00020013253	apex2	100	60.317	Oryzias_latipes_hni
ENSAMXG00000007422	apex2	100	61.268	ENSORLG00015007515	apex2	100	60.808	Oryzias_latipes_hsok
ENSAMXG00000007422	apex2	100	60.644	ENSOMEG00000003655	apex2	100	60.823	Oryzias_melastigma
ENSAMXG00000007422	apex2	99	45.709	ENSOGAG00000007797	APEX2	99	44.792	Otolemur_garnettii
ENSAMXG00000007422	apex2	99	45.745	ENSOARG00000005742	APEX2	99	45.567	Ovis_aries
ENSAMXG00000007422	apex2	99	45.423	ENSPPAG00000035747	APEX2	99	45.070	Pan_paniscus
ENSAMXG00000007422	apex2	99	45.326	ENSPPRG00000002440	APEX2	99	44.974	Panthera_pardus
ENSAMXG00000007422	apex2	99	45.070	ENSPTIG00000021651	APEX2	99	44.718	Panthera_tigris_altaica
ENSAMXG00000007422	apex2	99	45.423	ENSPTRG00000021946	APEX2	99	45.070	Pan_troglodytes
ENSAMXG00000007422	apex2	99	44.894	ENSPANG00000003595	APEX2	99	44.718	Papio_anubis
ENSAMXG00000007422	apex2	100	61.620	ENSPKIG00000007752	apex2	100	61.972	Paramormyrops_kingsleyae
ENSAMXG00000007422	apex2	100	60.984	ENSPMGG00000009151	apex2	100	59.552	Periophthalmus_magnuspinnatus
ENSAMXG00000007422	apex2	99	45.679	ENSPEMG00000016475	Apex2	99	56.790	Peromyscus_maniculatus_bairdii
ENSAMXG00000007422	apex2	99	50.543	ENSPCIG00000007633	APEX2	98	50.272	Phascolarctos_cinereus
ENSAMXG00000007422	apex2	100	59.796	ENSPFOG00000000408	apex2	100	60.477	Poecilia_formosa
ENSAMXG00000007422	apex2	100	59.796	ENSPLAG00000023814	apex2	100	60.307	Poecilia_latipinna
ENSAMXG00000007422	apex2	100	59.655	ENSPMEG00000023222	apex2	100	60.345	Poecilia_mexicana
ENSAMXG00000007422	apex2	99	45.246	ENSPPYG00000020388	APEX2	99	44.894	Pongo_abelii
ENSAMXG00000007422	apex2	99	46.316	ENSPCOG00000016083	APEX2	99	45.709	Propithecus_coquereli
ENSAMXG00000007422	apex2	92	48.141	ENSPVAG00000007851	APEX2	99	47.750	Pteropus_vampyrus
ENSAMXG00000007422	apex2	100	62.324	ENSPNYG00000015698	apex2	100	62.324	Pundamilia_nyererei
ENSAMXG00000007422	apex2	100	72.373	ENSPNAG00000011666	apex2	100	72.373	Pygocentrus_nattereri
ENSAMXG00000007422	apex2	99	44.662	ENSRNOG00000000166	Apex2	99	44.306	Rattus_norvegicus
ENSAMXG00000007422	apex2	99	45.471	ENSRBIG00000036500	APEX2	99	45.293	Rhinopithecus_bieti
ENSAMXG00000007422	apex2	99	44.718	ENSRROG00000032674	APEX2	99	44.542	Rhinopithecus_roxellana
ENSAMXG00000007422	apex2	67	44.262	YBL019W	APN2	80	44.262	Saccharomyces_cerevisiae
ENSAMXG00000007422	apex2	96	37.828	ENSSBOG00000003489	-	96	37.453	Saimiri_boliviensis_boliviensis
ENSAMXG00000007422	apex2	99	45.599	ENSSBOG00000030500	-	99	45.246	Saimiri_boliviensis_boliviensis
ENSAMXG00000007422	apex2	99	51.087	ENSSHAG00000007846	APEX2	99	51.449	Sarcophilus_harrisii
ENSAMXG00000007422	apex2	100	64.093	ENSSFOG00015010354	apex2	100	63.604	Scleropages_formosus
ENSAMXG00000007422	apex2	100	63.509	ENSSMAG00000012753	apex2	100	63.860	Scophthalmus_maximus
ENSAMXG00000007422	apex2	100	63.894	ENSSDUG00000022892	apex2	100	63.894	Seriola_dumerili
ENSAMXG00000007422	apex2	100	63.718	ENSSLDG00000024347	apex2	100	63.718	Seriola_lalandi_dorsalis
ENSAMXG00000007422	apex2	99	47.153	ENSSARG00000010297	APEX2	99	47.509	Sorex_araneus
ENSAMXG00000007422	apex2	100	63.763	ENSSPAG00000016279	apex2	100	63.937	Stegastes_partitus
ENSAMXG00000007422	apex2	99	45.648	ENSSSCG00000012348	-	99	45.115	Sus_scrofa
ENSAMXG00000007422	apex2	100	62.324	ENSTRUG00000015660	apex2	100	62.324	Takifugu_rubripes
ENSAMXG00000007422	apex2	67	77.778	ENSTNIG00000003725	apex2	89	77.778	Tetraodon_nigroviridis
ENSAMXG00000007422	apex2	92	46.911	ENSTBEG00000010520	APEX2	99	46.139	Tupaia_belangeri
ENSAMXG00000007422	apex2	99	44.858	ENSUAMG00000004720	APEX2	93	57.589	Ursus_americanus
ENSAMXG00000007422	apex2	99	42.349	ENSUMAG00000002892	APEX2	99	42.171	Ursus_maritimus
ENSAMXG00000007422	apex2	99	45.053	ENSVVUG00000005989	APEX2	99	44.700	Vulpes_vulpes
ENSAMXG00000007422	apex2	99	51.264	ENSXETG00000022026	apex2	99	50.361	Xenopus_tropicalis
ENSAMXG00000007422	apex2	100	59.455	ENSXMAG00000025740	apex2	100	59.455	Xiphophorus_maculatus