EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSAMXG00000007436 (Gene tree)
Gene ID
103029729
Gene Symbol
csde1
Alias
fa92c07|si:ch211-261n11.2|wu:fa92c07|wu:fa97c10|wu:fb53f07|wu:fb78d03
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Astyanax_mexicanus
Status
putative
Strand
Plus strand
Length
12130 bases
Position
chr6:7582837-7594966
Accession
103029729
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAMXP00000007658CSDPF00313.222.5e-8115
ENSAMXP00000007658CSDPF00313.222.5e-8125
ENSAMXP00000007658CSDPF00313.222.5e-8135
ENSAMXP00000007658CSDPF00313.222.5e-8145
ENSAMXP00000007658CSDPF00313.222.5e-8155
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAMXT00000007658-2304XM_007231860ENSAMXP00000007658767 (aa)XP_007231922W5KJ96
Gene Model
Click here to download ENSAMXG00000007436's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000007436's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAMXG00000007436csde110077.173ENSG00000009307CSDE110084.559Homo_sapiens
ENSAMXG00000007436csde110087.678ENSAPOG00000015538csde110087.678Acanthochromis_polyacanthus
ENSAMXG00000007436csde110076.394ENSAMEG00000017129CSDE19476.394Ailuropoda_melanoleuca
ENSAMXG00000007436csde19084.595ENSACIG00000015175csde19984.595Amphilophus_citrinellus
ENSAMXG00000007436csde110087.808ENSAOCG00000011510csde110087.808Amphiprion_ocellaris
ENSAMXG00000007436csde110087.808ENSAPEG00000007194csde110087.808Amphiprion_percula
ENSAMXG00000007436csde110086.381ENSATEG00000003864csde110086.381Anabas_testudineus
ENSAMXG00000007436csde110077.951ENSAPLG00000008797CSDE110077.951Anas_platyrhynchos
ENSAMXG00000007436csde110075.810ENSACAG00000003120CSDE110075.810Anolis_carolinensis
ENSAMXG00000007436csde19162.191ENSANAG00000028396-9362.191Aotus_nancymaae
ENSAMXG00000007436csde110077.043ENSANAG00000024665CSDE19578.041Aotus_nancymaae
ENSAMXG00000007436csde110084.565ENSACLG00000013296csde110085.084Astatotilapia_calliptera
ENSAMXG00000007436csde110076.913ENSBTAG00000000678CSDE110076.913Bos_taurus
ENSAMXG00000007436csde110077.043ENSCJAG00000012565CSDE19477.043Callithrix_jacchus
ENSAMXG00000007436csde19877.748ENSCAFG00000009618CSDE19477.748Canis_familiaris
ENSAMXG00000007436csde110077.302ENSCAFG00020000481CSDE110077.302Canis_lupus_dingo
ENSAMXG00000007436csde110076.783ENSCHIG00000017250CSDE110076.783Capra_hircus
ENSAMXG00000007436csde110077.173ENSTSYG00000003747CSDE110077.173Carlito_syrichta
ENSAMXG00000007436csde110053.567ENSCAPG00000015128CSDE110053.567Cavia_aperea
ENSAMXG00000007436csde110071.501ENSCPOG00000040388CSDE110071.501Cavia_porcellus
ENSAMXG00000007436csde19555.083ENSCCAG00000033677-9955.083Cebus_capucinus
ENSAMXG00000007436csde110077.043ENSCCAG00000036794CSDE110074.065Cebus_capucinus
ENSAMXG00000007436csde19754.102ENSCCAG00000030878-9154.102Cebus_capucinus
ENSAMXG00000007436csde110077.173ENSCATG00000036962CSDE19777.173Cercocebus_atys
ENSAMXG00000007436csde110077.173ENSCLAG00000006618CSDE110077.173Chinchilla_lanigera
ENSAMXG00000007436csde110074.190ENSCSAG00000001658CSDE19574.190Chlorocebus_sabaeus
ENSAMXG00000007436csde19375.817ENSCHOG00000000918CSDE18175.817Choloepus_hoffmanni
ENSAMXG00000007436csde110078.599ENSCPBG00000016547CSDE110078.599Chrysemys_picta_bellii
ENSAMXG00000007436csde19742.717ENSCING00000014465-9642.717Ciona_intestinalis
ENSAMXG00000007436csde19643.023ENSCSAVG00000008100-9943.023Ciona_savignyi
ENSAMXG00000007436csde110077.173ENSCANG00000035096CSDE19777.173Colobus_angolensis_palliatus
ENSAMXG00000007436csde17879.705ENSCANG00000031069-9479.705Colobus_angolensis_palliatus
ENSAMXG00000007436csde110076.394ENSCGRG00001016833-10076.394Cricetulus_griseus_chok1gshd
ENSAMXG00000007436csde110062.387ENSCGRG00001014011-10062.387Cricetulus_griseus_chok1gshd
ENSAMXG00000007436csde19772.284ENSCGRG00000002225-10072.284Cricetulus_griseus_crigri
ENSAMXG00000007436csde110073.043ENSCGRG00000005831-10073.043Cricetulus_griseus_crigri
ENSAMXG00000007436csde110085.603ENSCSEG00000002620csde110085.603Cynoglossus_semilaevis
ENSAMXG00000007436csde110085.344ENSCVAG00000001344csde110085.344Cyprinodon_variegatus
ENSAMXG00000007436csde110085.232ENSDARG00000074758csde19986.702Danio_rerio
ENSAMXG00000007436csde16647.910ENSDNOG00000034464-9947.910Dasypus_novemcinctus
ENSAMXG00000007436csde110077.332ENSDNOG00000010287-9377.332Dasypus_novemcinctus
ENSAMXG00000007436csde110073.566ENSDORG00000011609Csde110075.595Dipodomys_ordii
ENSAMXG00000007436csde19648.861FBgn0263352Unr8348.276Drosophila_melanogaster
ENSAMXG00000007436csde17853.756ENSETEG00000007109-9953.756Echinops_telfairi
ENSAMXG00000007436csde19269.942ENSETEG00000002491-8269.942Echinops_telfairi
ENSAMXG00000007436csde19069.085ENSETEG00000006280-9969.085Echinops_telfairi
ENSAMXG00000007436csde19959.740ENSETEG00000013678-9959.740Echinops_telfairi
ENSAMXG00000007436csde19954.141ENSEBUG00000008647csde19952.455Eptatretus_burgeri
ENSAMXG00000007436csde110077.432ENSEASG00005006284CSDE110074.439Equus_asinus_asinus
ENSAMXG00000007436csde110077.432ENSECAG00000020885CSDE19977.235Equus_caballus
ENSAMXG00000007436csde19282.243ENSEEUG00000006286CSDE16882.243Erinaceus_europaeus
ENSAMXG00000007436csde110085.881ENSELUG00000015507csde110085.881Esox_lucius
ENSAMXG00000007436csde110077.302ENSFCAG00000029266CSDE110077.302Felis_catus
ENSAMXG00000007436csde110074.813ENSFALG00000003407CSDE110074.813Ficedula_albicollis
ENSAMXG00000007436csde110073.566ENSFDAG00000007882CSDE110075.595Fukomys_damarensis
ENSAMXG00000007436csde19885.733ENSFHEG00000010799csde19985.733Fundulus_heteroclitus
ENSAMXG00000007436csde19983.229ENSGMOG00000012731csde110083.229Gadus_morhua
ENSAMXG00000007436csde19875.095ENSGALG00000002139CSDE19875.095Gallus_gallus
ENSAMXG00000007436csde19385.997ENSGAFG00000005241csde19585.997Gambusia_affinis
ENSAMXG00000007436csde19983.354ENSGACG00000004544csde110083.354Gasterosteus_aculeatus
ENSAMXG00000007436csde110078.729ENSGAGG00000017685CSDE110075.686Gopherus_agassizii
ENSAMXG00000007436csde110077.173ENSGGOG00000002164CSDE110077.173Gorilla_gorilla
ENSAMXG00000007436csde110084.565ENSHBUG00000020315csde110085.084Haplochromis_burtoni
ENSAMXG00000007436csde19764.523ENSHGLG00000010039-10064.523Heterocephalus_glaber_female
ENSAMXG00000007436csde110063.191ENSHGLG00000019549-10063.191Heterocephalus_glaber_female
ENSAMXG00000007436csde19966.536ENSHGLG00000007471-9966.536Heterocephalus_glaber_female
ENSAMXG00000007436csde19959.500ENSHGLG00000000650-9959.500Heterocephalus_glaber_female
ENSAMXG00000007436csde110069.261ENSHGLG00000003829-10069.261Heterocephalus_glaber_female
ENSAMXG00000007436csde19767.113ENSHGLG00000008555-10067.113Heterocephalus_glaber_female
ENSAMXG00000007436csde110069.780ENSHGLG00000009620-10070.039Heterocephalus_glaber_female
ENSAMXG00000007436csde19962.889ENSHGLG00100002245-9962.889Heterocephalus_glaber_male
ENSAMXG00000007436csde110063.294ENSHGLG00100001846-10063.294Heterocephalus_glaber_male
ENSAMXG00000007436csde19759.202ENSHGLG00100004833-10059.202Heterocephalus_glaber_male
ENSAMXG00000007436csde19364.216ENSHGLG00100004195-10064.216Heterocephalus_glaber_male
ENSAMXG00000007436csde19764.302ENSHGLG00100006910-10064.302Heterocephalus_glaber_male
ENSAMXG00000007436csde110064.981ENSHGLG00100012072-10064.981Heterocephalus_glaber_male
ENSAMXG00000007436csde110076.783ENSHGLG00100019438-10076.783Heterocephalus_glaber_male
ENSAMXG00000007436csde19965.933ENSHGLG00100007287-9965.933Heterocephalus_glaber_male
ENSAMXG00000007436csde110084.695ENSHCOG00000004158csde110084.695Hippocampus_comes
ENSAMXG00000007436csde110089.309ENSIPUG00000000355csde110089.309Ictalurus_punctatus
ENSAMXG00000007436csde19266.049ENSSTOG00000032722-9866.049Ictidomys_tridecemlineatus
ENSAMXG00000007436csde110063.104ENSSTOG00000030994-10063.104Ictidomys_tridecemlineatus
ENSAMXG00000007436csde110073.691ENSJJAG00000019571Csde110075.744Jaculus_jaculus
ENSAMXG00000007436csde110082.338ENSKMAG00000005685csde110081.931Kryptolebias_marmoratus
ENSAMXG00000007436csde110086.770ENSLBEG00000014770csde110086.770Labrus_bergylta
ENSAMXG00000007436csde110073.120ENSLACG00000018452CSDE19473.120Latimeria_chalumnae
ENSAMXG00000007436csde110082.103ENSLOCG00000010413csde19482.103Lepisosteus_oculatus
ENSAMXG00000007436csde110076.783ENSLAFG00000007150CSDE19676.783Loxodonta_africana
ENSAMXG00000007436csde110077.173ENSMFAG00000003674CSDE110077.173Macaca_fascicularis
ENSAMXG00000007436csde110077.173ENSMMUG00000001974CSDE110077.173Macaca_mulatta
ENSAMXG00000007436csde110077.173ENSMNEG00000045247CSDE19777.173Macaca_nemestrina
ENSAMXG00000007436csde110076.913ENSMLEG00000038673CSDE19476.913Mandrillus_leucophaeus
ENSAMXG00000007436csde110087.030ENSMAMG00000008821csde110087.030Mastacembelus_armatus
ENSAMXG00000007436csde110084.565ENSMZEG00005021675csde110085.084Maylandia_zebra
ENSAMXG00000007436csde110077.979ENSMGAG00000016381CSDE110077.979Meleagris_gallopavo
ENSAMXG00000007436csde110073.441ENSMAUG00000014031Csde110075.446Mesocricetus_auratus
ENSAMXG00000007436csde110076.654ENSMICG00000002050CSDE19676.593Microcebus_murinus
ENSAMXG00000007436csde110076.394ENSMOCG00000018960Csde110076.394Microtus_ochrogaster
ENSAMXG00000007436csde110087.678ENSMMOG00000015075csde110087.678Mola_mola
ENSAMXG00000007436csde110077.361ENSMODG00000004685CSDE110075.187Monodelphis_domestica
ENSAMXG00000007436csde110086.770ENSMALG00000007132csde110086.770Monopterus_albus
ENSAMXG00000007436csde110076.524MGP_CAROLIEiJ_G0025444Csde19292.157Mus_caroli
ENSAMXG00000007436csde110076.524ENSMUSG00000068823Csde110084.106Mus_musculus
ENSAMXG00000007436csde110076.524MGP_PahariEiJ_G0026888Csde19292.157Mus_pahari
ENSAMXG00000007436csde110076.524MGP_SPRETEiJ_G0026394Csde19292.157Mus_spretus
ENSAMXG00000007436csde19874.682ENSMPUG00000005753CSDE19974.682Mustela_putorius_furo
ENSAMXG00000007436csde110077.302ENSMLUG00000005681CSDE19477.302Myotis_lucifugus
ENSAMXG00000007436csde110073.317ENSNGAG00000021929Csde110075.298Nannospalax_galili
ENSAMXG00000007436csde19752.106ENSNGAG00000012599-10052.106Nannospalax_galili
ENSAMXG00000007436csde110084.565ENSNBRG00000020808csde110085.084Neolamprologus_brichardi
ENSAMXG00000007436csde110077.043ENSNLEG00000004842CSDE19777.043Nomascus_leucogenys
ENSAMXG00000007436csde19875.364ENSMEUG00000002677CSDE19975.364Notamacropus_eugenii
ENSAMXG00000007436csde19871.006ENSOPRG00000005002CSDE18271.006Ochotona_princeps
ENSAMXG00000007436csde110073.566ENSODEG00000007383-10075.595Octodon_degus
ENSAMXG00000007436csde19751.322ENSODEG00000005979-9851.322Octodon_degus
ENSAMXG00000007436csde110079.609ENSONIG00000009309csde110080.098Oreochromis_niloticus
ENSAMXG00000007436csde110076.271ENSOANG00000003346-8176.271Ornithorhynchus_anatinus
ENSAMXG00000007436csde110077.302ENSOCUG00000016438CSDE19477.302Oryctolagus_cuniculus
ENSAMXG00000007436csde110084.047ENSORLG00000000707csde110084.047Oryzias_latipes
ENSAMXG00000007436csde110080.875ENSORLG00020005148csde110078.999Oryzias_latipes_hni
ENSAMXG00000007436csde110083.917ENSORLG00015019415csde110083.917Oryzias_latipes_hsok
ENSAMXG00000007436csde110084.047ENSOMEG00000015656csde110084.695Oryzias_melastigma
ENSAMXG00000007436csde110077.173ENSOGAG00000012127CSDE19477.173Otolemur_garnettii
ENSAMXG00000007436csde110076.913ENSOARG00000020034CSDE19476.913Ovis_aries
ENSAMXG00000007436csde110077.173ENSPPAG00000025861CSDE110077.173Pan_paniscus
ENSAMXG00000007436csde110077.302ENSPPRG00000006747CSDE19477.302Panthera_pardus
ENSAMXG00000007436csde110077.302ENSPTIG00000015468CSDE110074.314Panthera_tigris_altaica
ENSAMXG00000007436csde110077.173ENSPTRG00000033721CSDE110074.190Pan_troglodytes
ENSAMXG00000007436csde110077.173ENSPANG00000018873CSDE110077.173Papio_anubis
ENSAMXG00000007436csde110085.065ENSPKIG00000009459csde110085.065Paramormyrops_kingsleyae
ENSAMXG00000007436csde19376.754ENSPSIG00000003823CSDE19676.754Pelodiscus_sinensis
ENSAMXG00000007436csde110085.104ENSPMGG00000000772csde110085.104Periophthalmus_magnuspinnatus
ENSAMXG00000007436csde110073.691ENSPEMG00000020357-10075.744Peromyscus_maniculatus_bairdii
ENSAMXG00000007436csde110075.187ENSPCIG00000022587CSDE110075.187Phascolarctos_cinereus
ENSAMXG00000007436csde19785.271ENSPFOG00000012664csde110085.581Poecilia_formosa
ENSAMXG00000007436csde19581.164ENSPLAG00000017680csde19381.164Poecilia_latipinna
ENSAMXG00000007436csde19580.858ENSPMEG00000005094csde19580.858Poecilia_mexicana
ENSAMXG00000007436csde110082.090ENSPREG00000011631csde110079.567Poecilia_reticulata
ENSAMXG00000007436csde110074.065ENSPPYG00000000996CSDE110074.065Pongo_abelii
ENSAMXG00000007436csde110074.449ENSPCAG00000014368CSDE19474.449Procavia_capensis
ENSAMXG00000007436csde18870.370ENSPCOG00000008223-9270.370Propithecus_coquereli
ENSAMXG00000007436csde110077.302ENSPCOG00000017893CSDE110077.302Propithecus_coquereli
ENSAMXG00000007436csde110071.984ENSPVAG00000008225CSDE18776.793Pteropus_vampyrus
ENSAMXG00000007436csde110084.565ENSPNYG00000013745csde110085.084Pundamilia_nyererei
ENSAMXG00000007436csde110095.306ENSPNAG00000001958csde110095.306Pygocentrus_nattereri
ENSAMXG00000007436csde110073.441ENSRNOG00000061058Csde110073.441Rattus_norvegicus
ENSAMXG00000007436csde110072.668ENSRBIG00000038966-9472.668Rhinopithecus_bieti
ENSAMXG00000007436csde110074.093ENSRBIG00000038088-10074.093Rhinopithecus_bieti
ENSAMXG00000007436csde110077.173ENSRROG00000043101CSDE19777.173Rhinopithecus_roxellana
ENSAMXG00000007436csde110077.043ENSSBOG00000035592CSDE19577.043Saimiri_boliviensis_boliviensis
ENSAMXG00000007436csde110078.080ENSSHAG00000009831CSDE110078.080Sarcophilus_harrisii
ENSAMXG00000007436csde110084.416ENSSFOG00015007498csde110084.416Scleropages_formosus
ENSAMXG00000007436csde110086.252ENSSMAG00000007203csde110086.252Scophthalmus_maximus
ENSAMXG00000007436csde110087.030ENSSDUG00000015380csde110087.030Seriola_dumerili
ENSAMXG00000007436csde110087.030ENSSLDG00000008819csde110087.030Seriola_lalandi_dorsalis
ENSAMXG00000007436csde110076.524ENSSARG00000000738CSDE19476.524Sorex_araneus
ENSAMXG00000007436csde110078.470ENSSPUG00000008714CSDE110078.470Sphenodon_punctatus
ENSAMXG00000007436csde110087.549ENSSPAG00000000716csde110087.549Stegastes_partitus
ENSAMXG00000007436csde110077.562ENSSSCG00000006752CSDE110077.562Sus_scrofa
ENSAMXG00000007436csde110073.881ENSTGUG00000000972CSDE110073.881Taeniopygia_guttata
ENSAMXG00000007436csde110082.857ENSTRUG00000007996csde110082.857Takifugu_rubripes
ENSAMXG00000007436csde19281.226ENSTNIG00000010878csde110081.226Tetraodon_nigroviridis
ENSAMXG00000007436csde17679.755ENSTBEG00000011880-6179.755Tupaia_belangeri
ENSAMXG00000007436csde110076.654ENSTTRG00000015583CSDE19476.654Tursiops_truncatus
ENSAMXG00000007436csde18773.120ENSUAMG00000024289-9973.120Ursus_americanus
ENSAMXG00000007436csde19081.731ENSUAMG00000021779-9981.731Ursus_americanus
ENSAMXG00000007436csde18671.631ENSUMAG00000011714-9971.631Ursus_maritimus
ENSAMXG00000007436csde110070.817ENSUMAG00000009720-9770.817Ursus_maritimus
ENSAMXG00000007436csde110080.787ENSVPAG00000000749CSDE17980.787Vicugna_pacos
ENSAMXG00000007436csde19372.965ENSVVUG00000009890CSDE19472.965Vulpes_vulpes
ENSAMXG00000007436csde110074.907ENSXETG00000021448csde110074.907Xenopus_tropicalis
ENSAMXG00000007436csde19389.371ENSXCOG00000000035csde18989.371Xiphophorus_couchianus
ENSAMXG00000007436csde19886.508ENSXMAG00000009080csde19886.508Xiphophorus_maculatus

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