EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000007545 (Gene tree)
Gene ID: 103046410
Gene Symbol: xrcc6
Alias: Ku autoantigen|Ku70|g22p1|wu:fi87b06|zgc:64131
Full Name: X-ray repair cross complementing 6
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 5917 bases
Position: chr4:1898140-1904056
Accession: 103046410
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000007751	SAP	PF02037.27	7.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000007751	-	2083	XM_007259084	ENSAMXP00000007751	609 (aa)	XP_007259146	W5KJI9

Gene Model

Click here to download ENSAMXG00000007545's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03450	Non-homologous end-joining	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000007545's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000007545	xrcc6	99	57.353	ENSG00000196419	XRCC6	99	57.516	Homo_sapiens
ENSAMXG00000007545	xrcc6	99	78.454	ENSAPOG00000012704	xrcc6	99	78.454	Acanthochromis_polyacanthus
ENSAMXG00000007545	xrcc6	99	78.618	ENSACIG00000021277	xrcc6	99	78.618	Amphilophus_citrinellus
ENSAMXG00000007545	xrcc6	99	77.796	ENSAOCG00000021344	xrcc6	99	77.796	Amphiprion_ocellaris
ENSAMXG00000007545	xrcc6	99	78.289	ENSAPEG00000020712	xrcc6	99	78.289	Amphiprion_percula
ENSAMXG00000007545	xrcc6	100	77.997	ENSATEG00000007119	xrcc6	99	77.997	Anabas_testudineus
ENSAMXG00000007545	xrcc6	89	63.004	ENSAPLG00000004469	XRCC6	98	63.004	Anas_platyrhynchos
ENSAMXG00000007545	xrcc6	99	48.777	ENSANAG00000023445	-	99	48.777	Aotus_nancymaae
ENSAMXG00000007545	xrcc6	99	57.353	ENSANAG00000018684	XRCC6	99	57.353	Aotus_nancymaae
ENSAMXG00000007545	xrcc6	99	50.411	ENSANAG00000020017	-	99	50.411	Aotus_nancymaae
ENSAMXG00000007545	xrcc6	99	50.490	ENSANAG00000035230	-	99	50.490	Aotus_nancymaae
ENSAMXG00000007545	xrcc6	99	77.796	ENSACLG00000018608	xrcc6	99	77.668	Astatotilapia_calliptera
ENSAMXG00000007545	xrcc6	99	57.353	ENSCJAG00000045512	XRCC6	99	57.353	Callithrix_jacchus
ENSAMXG00000007545	xrcc6	99	56.863	ENSTSYG00000011348	XRCC6	99	57.026	Carlito_syrichta
ENSAMXG00000007545	xrcc6	99	47.619	ENSCCAG00000037663	-	97	47.619	Cebus_capucinus
ENSAMXG00000007545	xrcc6	99	54.235	ENSCCAG00000030041	-	95	54.235	Cebus_capucinus
ENSAMXG00000007545	xrcc6	88	61.395	ENSCCAG00000030468	-	99	61.395	Cebus_capucinus
ENSAMXG00000007545	xrcc6	99	46.809	ENSCCAG00000035711	-	99	46.972	Cebus_capucinus
ENSAMXG00000007545	xrcc6	99	57.680	ENSCATG00000042366	XRCC6	99	57.843	Cercocebus_atys
ENSAMXG00000007545	xrcc6	99	57.610	ENSCLAG00000016669	XRCC6	99	57.774	Chinchilla_lanigera
ENSAMXG00000007545	xrcc6	99	57.680	ENSCSAG00000005784	XRCC6	99	57.843	Chlorocebus_sabaeus
ENSAMXG00000007545	xrcc6	100	61.601	ENSCPBG00000020535	XRCC6	99	61.601	Chrysemys_picta_bellii
ENSAMXG00000007545	xrcc6	98	34.992	ENSCING00000000633	-	98	34.992	Ciona_intestinalis
ENSAMXG00000007545	xrcc6	99	57.680	ENSCANG00000031032	XRCC6	99	57.843	Colobus_angolensis_palliatus
ENSAMXG00000007545	xrcc6	99	53.289	ENSCGRG00001019029	Xrcc6	99	53.289	Cricetulus_griseus_chok1gshd
ENSAMXG00000007545	xrcc6	99	57.895	ENSCGRG00000001528	Xrcc6	99	57.895	Cricetulus_griseus_crigri
ENSAMXG00000007545	xrcc6	99	74.671	ENSCSEG00000020434	xrcc6	99	74.671	Cynoglossus_semilaevis
ENSAMXG00000007545	xrcc6	99	76.151	ENSCVAG00000002189	xrcc6	99	76.151	Cyprinodon_variegatus
ENSAMXG00000007545	xrcc6	100	83.770	ENSDARG00000071551	xrcc6	99	83.770	Danio_rerio
ENSAMXG00000007545	xrcc6	78	54.258	ENSETEG00000015333	-	77	54.258	Echinops_telfairi
ENSAMXG00000007545	xrcc6	99	55.810	ENSEASG00005001514	XRCC6	99	56.465	Equus_asinus_asinus
ENSAMXG00000007545	xrcc6	99	55.646	ENSECAG00000017563	XRCC6	99	55.752	Equus_caballus
ENSAMXG00000007545	xrcc6	100	78.654	ENSELUG00000020301	xrcc6	99	78.654	Esox_lucius
ENSAMXG00000007545	xrcc6	99	60.784	ENSFALG00000011908	XRCC6	96	60.948	Ficedula_albicollis
ENSAMXG00000007545	xrcc6	99	77.152	ENSFHEG00000016833	xrcc6	99	76.645	Fundulus_heteroclitus
ENSAMXG00000007545	xrcc6	99	67.427	ENSGMOG00000013524	xrcc6	100	67.427	Gadus_morhua
ENSAMXG00000007545	xrcc6	100	61.102	ENSGALG00000011932	XRCC6	99	61.264	Gallus_gallus
ENSAMXG00000007545	xrcc6	100	75.369	ENSGAFG00000008130	xrcc6	99	75.369	Gambusia_affinis
ENSAMXG00000007545	xrcc6	99	76.346	ENSGACG00000004868	xrcc6	99	76.346	Gasterosteus_aculeatus
ENSAMXG00000007545	xrcc6	100	61.438	ENSGAGG00000017518	XRCC6	99	61.438	Gopherus_agassizii
ENSAMXG00000007545	xrcc6	99	57.353	ENSGGOG00000015885	XRCC6	99	57.516	Gorilla_gorilla
ENSAMXG00000007545	xrcc6	93	78.191	ENSHBUG00000023281	xrcc6	99	78.191	Haplochromis_burtoni
ENSAMXG00000007545	xrcc6	99	56.721	ENSHGLG00000018078	XRCC6	99	56.721	Heterocephalus_glaber_female
ENSAMXG00000007545	xrcc6	99	56.721	ENSHGLG00100011264	XRCC6	99	56.721	Heterocephalus_glaber_male
ENSAMXG00000007545	xrcc6	100	73.727	ENSHCOG00000009821	xrcc6	99	73.727	Hippocampus_comes
ENSAMXG00000007545	xrcc6	100	87.521	ENSIPUG00000000767	xrcc6	99	87.521	Ictalurus_punctatus
ENSAMXG00000007545	xrcc6	99	56.956	ENSSTOG00000009490	XRCC6	99	57.283	Ictidomys_tridecemlineatus
ENSAMXG00000007545	xrcc6	99	51.882	ENSJJAG00000017136	Xrcc6	99	53.028	Jaculus_jaculus
ENSAMXG00000007545	xrcc6	99	77.303	ENSKMAG00000002141	xrcc6	99	77.303	Kryptolebias_marmoratus
ENSAMXG00000007545	xrcc6	100	76.190	ENSLBEG00000002691	xrcc6	99	76.190	Labrus_bergylta
ENSAMXG00000007545	xrcc6	86	75.962	ENSLOCG00000011533	xrcc6	99	75.962	Lepisosteus_oculatus
ENSAMXG00000007545	xrcc6	99	57.680	ENSMFAG00000003352	XRCC6	99	57.843	Macaca_fascicularis
ENSAMXG00000007545	xrcc6	99	57.680	ENSMMUG00000001856	XRCC6	99	57.843	Macaca_mulatta
ENSAMXG00000007545	xrcc6	99	57.680	ENSMNEG00000035076	XRCC6	99	57.843	Macaca_nemestrina
ENSAMXG00000007545	xrcc6	99	57.680	ENSMLEG00000019869	XRCC6	99	57.843	Mandrillus_leucophaeus
ENSAMXG00000007545	xrcc6	100	75.574	ENSMAMG00000003368	xrcc6	99	75.574	Mastacembelus_armatus
ENSAMXG00000007545	xrcc6	96	75.427	ENSMAMG00000003405	xrcc6	97	75.427	Mastacembelus_armatus
ENSAMXG00000007545	xrcc6	99	77.632	ENSMZEG00005028080	xrcc6	99	77.504	Maylandia_zebra
ENSAMXG00000007545	xrcc6	100	60.778	ENSMGAG00000012146	XRCC6	99	60.940	Meleagris_gallopavo
ENSAMXG00000007545	xrcc6	99	58.155	ENSMAUG00000017340	Xrcc6	99	58.155	Mesocricetus_auratus
ENSAMXG00000007545	xrcc6	99	57.990	ENSMOCG00000015717	Xrcc6	99	58.155	Microtus_ochrogaster
ENSAMXG00000007545	xrcc6	100	74.384	ENSMMOG00000003536	xrcc6	99	74.384	Mola_mola
ENSAMXG00000007545	xrcc6	100	76.190	ENSMALG00000013912	xrcc6	95	76.190	Monopterus_albus
ENSAMXG00000007545	xrcc6	99	53.770	MGP_CAROLIEiJ_G0020067	Xrcc6	99	53.770	Mus_caroli
ENSAMXG00000007545	xrcc6	99	57.705	ENSMUSG00000022471	Xrcc6	99	59.316	Mus_musculus
ENSAMXG00000007545	xrcc6	99	57.377	MGP_PahariEiJ_G0020069	Xrcc6	99	57.377	Mus_pahari
ENSAMXG00000007545	xrcc6	96	59.247	MGP_SPRETEiJ_G0020967	Xrcc6	99	59.247	Mus_spretus
ENSAMXG00000007545	xrcc6	99	56.436	ENSNGAG00000013750	Xrcc6	99	56.436	Nannospalax_galili
ENSAMXG00000007545	xrcc6	99	77.796	ENSNBRG00000004125	xrcc6	99	77.796	Neolamprologus_brichardi
ENSAMXG00000007545	xrcc6	95	59.310	ENSOPRG00000002386	XRCC6	99	59.310	Ochotona_princeps
ENSAMXG00000007545	xrcc6	99	56.628	ENSODEG00000015847	XRCC6	99	56.956	Octodon_degus
ENSAMXG00000007545	xrcc6	99	77.961	ENSONIG00000019715	xrcc6	99	77.961	Oreochromis_niloticus
ENSAMXG00000007545	xrcc6	68	62.470	ENSOANG00000011328	XRCC6	99	62.470	Ornithorhynchus_anatinus
ENSAMXG00000007545	xrcc6	99	57.072	ENSOCUG00000006948	XRCC6	99	57.401	Oryctolagus_cuniculus
ENSAMXG00000007545	xrcc6	99	77.011	ENSORLG00020007820	xrcc6	99	77.011	Oryzias_latipes_hni
ENSAMXG00000007545	xrcc6	99	76.683	ENSORLG00015006406	xrcc6	99	76.683	Oryzias_latipes_hsok
ENSAMXG00000007545	xrcc6	99	76.683	ENSOMEG00000008998	xrcc6	99	76.683	Oryzias_melastigma
ENSAMXG00000007545	xrcc6	99	56.628	ENSOGAG00000008821	XRCC6	99	56.792	Otolemur_garnettii
ENSAMXG00000007545	xrcc6	92	57.568	ENSPPAG00000037167	XRCC6	99	57.568	Pan_paniscus
ENSAMXG00000007545	xrcc6	99	57.353	ENSPTRG00000045824	XRCC6	99	58.291	Pan_troglodytes
ENSAMXG00000007545	xrcc6	99	57.353	ENSPTRG00000022548	XRCC6	99	58.291	Pan_troglodytes
ENSAMXG00000007545	xrcc6	99	57.516	ENSPANG00000001252	XRCC6	99	59.914	Papio_anubis
ENSAMXG00000007545	xrcc6	100	78.325	ENSPKIG00000003974	xrcc6	99	78.325	Paramormyrops_kingsleyae
ENSAMXG00000007545	xrcc6	99	74.419	ENSPMGG00000014220	xrcc6	100	75.249	Periophthalmus_magnuspinnatus
ENSAMXG00000007545	xrcc6	99	57.331	ENSPEMG00000023446	Xrcc6	99	57.331	Peromyscus_maniculatus_bairdii
ENSAMXG00000007545	xrcc6	99	59.802	ENSPCIG00000026409	XRCC6	99	59.967	Phascolarctos_cinereus
ENSAMXG00000007545	xrcc6	99	76.645	ENSPFOG00000017173	xrcc6	99	76.645	Poecilia_formosa
ENSAMXG00000007545	xrcc6	99	76.645	ENSPLAG00000000562	xrcc6	99	76.645	Poecilia_latipinna
ENSAMXG00000007545	xrcc6	99	76.480	ENSPMEG00000018478	xrcc6	99	76.480	Poecilia_mexicana
ENSAMXG00000007545	xrcc6	99	76.721	ENSPREG00000020957	xrcc6	93	76.721	Poecilia_reticulata
ENSAMXG00000007545	xrcc6	99	51.634	ENSPPYG00000011876	XRCC6	99	51.797	Pongo_abelii
ENSAMXG00000007545	xrcc6	99	55.611	ENSPVAG00000001168	XRCC6	99	55.611	Pteropus_vampyrus
ENSAMXG00000007545	xrcc6	99	77.632	ENSPNYG00000003815	xrcc6	99	74.022	Pundamilia_nyererei
ENSAMXG00000007545	xrcc6	99	57.541	ENSRNOG00000006392	Xrcc6	99	57.705	Rattus_norvegicus
ENSAMXG00000007545	xrcc6	99	53.431	ENSRBIG00000039794	XRCC6	99	54.717	Rhinopithecus_bieti
ENSAMXG00000007545	xrcc6	99	57.680	ENSRROG00000030297	XRCC6	99	57.843	Rhinopithecus_roxellana
ENSAMXG00000007545	xrcc6	67	52.323	ENSSBOG00000024724	-	99	52.323	Saimiri_boliviensis_boliviensis
ENSAMXG00000007545	xrcc6	99	57.964	ENSSHAG00000010790	XRCC6	99	58.292	Sarcophilus_harrisii
ENSAMXG00000007545	xrcc6	100	80.131	ENSSFOG00015014409	xrcc6	99	80.131	Scleropages_formosus
ENSAMXG00000007545	xrcc6	99	79.112	ENSSMAG00000006496	xrcc6	99	78.982	Scophthalmus_maximus
ENSAMXG00000007545	xrcc6	99	79.112	ENSSDUG00000007542	xrcc6	99	78.982	Seriola_dumerili
ENSAMXG00000007545	xrcc6	100	78.489	ENSSLDG00000009974	xrcc6	99	78.489	Seriola_lalandi_dorsalis
ENSAMXG00000007545	xrcc6	100	61.765	ENSSPUG00000012086	XRCC6	99	61.928	Sphenodon_punctatus
ENSAMXG00000007545	xrcc6	100	78.654	ENSSPAG00000015199	xrcc6	99	78.654	Stegastes_partitus
ENSAMXG00000007545	xrcc6	96	62.564	ENSTGUG00000009852	-	99	61.275	Taeniopygia_guttata
ENSAMXG00000007545	xrcc6	99	73.191	ENSTRUG00000017070	xrcc6	99	73.355	Takifugu_rubripes
ENSAMXG00000007545	xrcc6	96	74.024	ENSTNIG00000012947	xrcc6	99	74.024	Tetraodon_nigroviridis
ENSAMXG00000007545	xrcc6	96	53.596	ENSTBEG00000011736	XRCC6	99	53.596	Tupaia_belangeri
ENSAMXG00000007545	xrcc6	99	46.972	ENSTTRG00000006749	XRCC6	99	47.954	Tursiops_truncatus
ENSAMXG00000007545	xrcc6	100	77.340	ENSXMAG00000009691	xrcc6	99	77.467	Xiphophorus_maculatus