EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000007921 (Gene tree)
Gene ID: 103035676
Gene Symbol: rrp7a
Alias: zgc:110084
Full Name: ribosomal RNA processing 7 homolog A
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 7437 bases
Position: chrAPWO02002300.1:31352-38788
Accession: 103035676
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000008140	RRP7	PF12923.7	4e-32	1	1
ENSAMXP00000008140	RRM_1	PF00076.22	3.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000008140	-	1716	XM_007236149	ENSAMXP00000008140	293 (aa)	XP_007236211	W5KKM8

Gene Model

Click here to download ENSAMXG00000007921's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000007921's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000007921	rrp7a	90	46.992	ENSG00000189306	RRP7A	93	47.566	Homo_sapiens
ENSAMXG00000007921	rrp7a	96	67.376	ENSAPOG00000021250	rrp7a	100	67.376	Acanthochromis_polyacanthus
ENSAMXG00000007921	rrp7a	90	49.442	ENSAMEG00000009503	RRP7A	97	47.857	Ailuropoda_melanoleuca
ENSAMXG00000007921	rrp7a	96	66.316	ENSACIG00000023067	rrp7a	100	66.316	Amphilophus_citrinellus
ENSAMXG00000007921	rrp7a	96	68.440	ENSAOCG00000004115	rrp7a	100	68.440	Amphiprion_ocellaris
ENSAMXG00000007921	rrp7a	96	69.149	ENSAPEG00000013688	rrp7a	100	69.149	Amphiprion_percula
ENSAMXG00000007921	rrp7a	96	68.794	ENSATEG00000009664	rrp7a	100	68.794	Anabas_testudineus
ENSAMXG00000007921	rrp7a	96	50.177	ENSACAG00000003579	RRP7A	100	50.352	Anolis_carolinensis
ENSAMXG00000007921	rrp7a	90	47.584	ENSANAG00000031200	RRP7A	93	47.940	Aotus_nancymaae
ENSAMXG00000007921	rrp7a	96	69.149	ENSACLG00000016790	rrp7a	100	69.149	Astatotilapia_calliptera
ENSAMXG00000007921	rrp7a	92	47.636	ENSBTAG00000016510	RRP7A	99	47.405	Bos_taurus
ENSAMXG00000007921	rrp7a	90	46.992	ENSCJAG00000009668	RRP7A	93	47.566	Callithrix_jacchus
ENSAMXG00000007921	rrp7a	90	47.584	ENSCAFG00000000965	RRP7	97	46.071	Canis_familiaris
ENSAMXG00000007921	rrp7a	90	47.584	ENSCAFG00020000251	RRP7A	97	46.071	Canis_lupus_dingo
ENSAMXG00000007921	rrp7a	92	47.636	ENSCHIG00000026787	RRP7A	99	47.405	Capra_hircus
ENSAMXG00000007921	rrp7a	90	45.113	ENSTSYG00000000198	RRP7A	93	45.693	Carlito_syrichta
ENSAMXG00000007921	rrp7a	90	47.744	ENSCAPG00000002325	RRP7A	100	47.744	Cavia_aperea
ENSAMXG00000007921	rrp7a	90	48.120	ENSCPOG00000030547	RRP7A	93	48.120	Cavia_porcellus
ENSAMXG00000007921	rrp7a	83	45.902	ENSCCAG00000021486	RRP7A	99	46.531	Cebus_capucinus
ENSAMXG00000007921	rrp7a	92	47.970	ENSCLAG00000016715	RRP7A	95	47.970	Chinchilla_lanigera
ENSAMXG00000007921	rrp7a	90	47.584	ENSCSAG00000005657	RRP7A	93	47.940	Chlorocebus_sabaeus
ENSAMXG00000007921	rrp7a	96	47.163	ENSCPBG00000021814	RRP7A	100	47.163	Chrysemys_picta_bellii
ENSAMXG00000007921	rrp7a	76	35.965	ENSCSAVG00000002555	-	85	35.965	Ciona_savignyi
ENSAMXG00000007921	rrp7a	59	78.125	ENSCGRG00001021873	-	92	85.714	Cricetulus_griseus_chok1gshd
ENSAMXG00000007921	rrp7a	78	45.064	ENSCGRG00001005713	-	99	45.064	Cricetulus_griseus_chok1gshd
ENSAMXG00000007921	rrp7a	88	41.445	ENSCGRG00000000540	-	100	41.825	Cricetulus_griseus_crigri
ENSAMXG00000007921	rrp7a	94	41.429	ENSCGRG00000000552	-	95	42.336	Cricetulus_griseus_crigri
ENSAMXG00000007921	rrp7a	92	46.350	ENSCGRG00000009567	-	95	46.715	Cricetulus_griseus_crigri
ENSAMXG00000007921	rrp7a	96	67.021	ENSCSEG00000007185	rrp7a	100	67.021	Cynoglossus_semilaevis
ENSAMXG00000007921	rrp7a	96	67.730	ENSCVAG00000004349	rrp7a	100	67.730	Cyprinodon_variegatus
ENSAMXG00000007921	rrp7a	96	62.544	ENSDARG00000098934	rrp7a	100	62.544	Danio_rerio
ENSAMXG00000007921	rrp7a	90	49.071	ENSDNOG00000037442	RRP7A	86	49.071	Dasypus_novemcinctus
ENSAMXG00000007921	rrp7a	94	47.500	ENSDORG00000016138	Rrp7a	97	47.500	Dipodomys_ordii
ENSAMXG00000007921	rrp7a	90	33.704	FBgn0031764	CG9107	98	32.714	Drosophila_melanogaster
ENSAMXG00000007921	rrp7a	88	46.388	ENSETEG00000018025	RRP7A	100	46.360	Echinops_telfairi
ENSAMXG00000007921	rrp7a	93	40.942	ENSEBUG00000010231	rrp7a	92	40.672	Eptatretus_burgeri
ENSAMXG00000007921	rrp7a	90	47.212	ENSEASG00005000804	RRP7A	93	47.584	Equus_asinus_asinus
ENSAMXG00000007921	rrp7a	90	47.584	ENSECAG00000015168	RRP7	98	46.643	Equus_caballus
ENSAMXG00000007921	rrp7a	96	71.530	ENSELUG00000009036	rrp7a	100	71.530	Esox_lucius
ENSAMXG00000007921	rrp7a	99	45.734	ENSFCAG00000033258	RRP7A	80	45.734	Felis_catus
ENSAMXG00000007921	rrp7a	88	49.615	ENSFALG00000011635	RRP7A	91	47.985	Ficedula_albicollis
ENSAMXG00000007921	rrp7a	92	48.905	ENSFDAG00000001321	RRP7A	95	48.905	Fukomys_damarensis
ENSAMXG00000007921	rrp7a	97	69.231	ENSFHEG00000006098	rrp7a	98	69.231	Fundulus_heteroclitus
ENSAMXG00000007921	rrp7a	91	65.056	ENSGMOG00000006218	rrp7a	100	65.056	Gadus_morhua
ENSAMXG00000007921	rrp7a	92	50.000	ENSGALG00000011866	RRP7A	97	50.000	Gallus_gallus
ENSAMXG00000007921	rrp7a	96	65.957	ENSGAFG00000017459	rrp7a	100	65.957	Gambusia_affinis
ENSAMXG00000007921	rrp7a	91	62.454	ENSGACG00000007212	rrp7a	100	62.454	Gasterosteus_aculeatus
ENSAMXG00000007921	rrp7a	96	46.454	ENSGAGG00000014621	RRP7A	100	46.454	Gopherus_agassizii
ENSAMXG00000007921	rrp7a	90	46.792	ENSGGOG00000014957	RRP7A	93	47.368	Gorilla_gorilla
ENSAMXG00000007921	rrp7a	96	68.794	ENSHBUG00000021788	rrp7a	100	68.794	Haplochromis_burtoni
ENSAMXG00000007921	rrp7a	91	48.718	ENSHGLG00000015706	RRP7A	94	48.718	Heterocephalus_glaber_female
ENSAMXG00000007921	rrp7a	92	45.985	ENSHGLG00100008187	-	96	47.273	Heterocephalus_glaber_male
ENSAMXG00000007921	rrp7a	94	46.043	ENSHGLG00100009556	-	96	46.043	Heterocephalus_glaber_male
ENSAMXG00000007921	rrp7a	96	67.491	ENSHCOG00000005813	rrp7a	88	67.491	Hippocampus_comes
ENSAMXG00000007921	rrp7a	96	71.886	ENSIPUG00000000556	rrp7a	100	71.886	Ictalurus_punctatus
ENSAMXG00000007921	rrp7a	90	48.496	ENSSTOG00000003111	RRP7A	93	48.496	Ictidomys_tridecemlineatus
ENSAMXG00000007921	rrp7a	90	46.642	ENSJJAG00000019486	Rrp7a	95	46.691	Jaculus_jaculus
ENSAMXG00000007921	rrp7a	96	68.085	ENSKMAG00000013819	rrp7a	100	68.085	Kryptolebias_marmoratus
ENSAMXG00000007921	rrp7a	96	48.754	ENSLACG00000002670	RRP7A	100	49.466	Latimeria_chalumnae
ENSAMXG00000007921	rrp7a	90	46.992	ENSLAFG00000012447	RRP7A	93	46.992	Loxodonta_africana
ENSAMXG00000007921	rrp7a	90	46.840	ENSMFAG00000042855	RRP7A	93	47.191	Macaca_fascicularis
ENSAMXG00000007921	rrp7a	90	43.609	ENSMFAG00000041664	-	93	41.455	Macaca_fascicularis
ENSAMXG00000007921	rrp7a	90	45.353	ENSMMUG00000010193	-	93	45.693	Macaca_mulatta
ENSAMXG00000007921	rrp7a	90	42.007	ENSMMUG00000009716	RRP7A	92	41.729	Macaca_mulatta
ENSAMXG00000007921	rrp7a	90	47.584	ENSMNEG00000033705	RRP7A	93	47.940	Macaca_nemestrina
ENSAMXG00000007921	rrp7a	94	43.728	ENSMLEG00000040230	RRP7A	99	45.113	Mandrillus_leucophaeus
ENSAMXG00000007921	rrp7a	96	68.440	ENSMAMG00000009125	rrp7a	100	68.440	Mastacembelus_armatus
ENSAMXG00000007921	rrp7a	96	69.149	ENSMZEG00005005197	rrp7a	100	69.149	Maylandia_zebra
ENSAMXG00000007921	rrp7a	89	50.958	ENSMGAG00000011980	RRP7A	100	50.958	Meleagris_gallopavo
ENSAMXG00000007921	rrp7a	90	47.212	ENSMICG00000041800	RRP7A	93	47.212	Microcebus_murinus
ENSAMXG00000007921	rrp7a	96	68.327	ENSMMOG00000004976	rrp7a	100	68.327	Mola_mola
ENSAMXG00000007921	rrp7a	94	46.619	ENSMODG00000006914	RRP7A	96	46.619	Monodelphis_domestica
ENSAMXG00000007921	rrp7a	96	69.504	ENSMALG00000001933	rrp7a	100	69.504	Monopterus_albus
ENSAMXG00000007921	rrp7a	94	45.230	MGP_CAROLIEiJ_G0020092	Rrp7a	98	45.230	Mus_caroli
ENSAMXG00000007921	rrp7a	90	46.241	ENSMUSG00000018040	Rrp7a	84	79.070	Mus_musculus
ENSAMXG00000007921	rrp7a	94	44.681	MGP_PahariEiJ_G0020099	Rrp7a	98	44.681	Mus_pahari
ENSAMXG00000007921	rrp7a	94	45.520	MGP_SPRETEiJ_G0020990	Rrp7a	98	45.520	Mus_spretus
ENSAMXG00000007921	rrp7a	90	48.496	ENSMPUG00000016315	RRP7A	93	48.496	Mustela_putorius_furo
ENSAMXG00000007921	rrp7a	90	47.584	ENSMLUG00000012404	RRP7A	93	47.584	Myotis_lucifugus
ENSAMXG00000007921	rrp7a	97	44.211	ENSNGAG00000010039	Rrp7a	99	44.755	Nannospalax_galili
ENSAMXG00000007921	rrp7a	95	68.683	ENSNBRG00000001824	rrp7a	100	68.683	Neolamprologus_brichardi
ENSAMXG00000007921	rrp7a	93	45.620	ENSNLEG00000036258	RRP7A	99	45.804	Nomascus_leucogenys
ENSAMXG00000007921	rrp7a	94	48.592	ENSODEG00000015126	RRP7A	100	48.264	Octodon_degus
ENSAMXG00000007921	rrp7a	96	69.258	ENSONIG00000008364	rrp7a	100	69.258	Oreochromis_niloticus
ENSAMXG00000007921	rrp7a	80	41.453	ENSOANG00000015007	RRP7A	86	40.928	Ornithorhynchus_anatinus
ENSAMXG00000007921	rrp7a	97	40.845	ENSOCUG00000027434	RRP7A	99	41.404	Oryctolagus_cuniculus
ENSAMXG00000007921	rrp7a	96	64.539	ENSORLG00000014826	rrp7a	100	64.539	Oryzias_latipes
ENSAMXG00000007921	rrp7a	96	64.539	ENSORLG00020006078	rrp7a	100	64.539	Oryzias_latipes_hni
ENSAMXG00000007921	rrp7a	96	64.539	ENSORLG00015018190	rrp7a	100	64.184	Oryzias_latipes_hsok
ENSAMXG00000007921	rrp7a	94	64.388	ENSOMEG00000007090	rrp7a	99	64.388	Oryzias_melastigma
ENSAMXG00000007921	rrp7a	90	48.327	ENSOGAG00000002857	RRP7A	93	49.259	Otolemur_garnettii
ENSAMXG00000007921	rrp7a	92	46.909	ENSOARG00000018986	RRP7A	99	46.713	Ovis_aries
ENSAMXG00000007921	rrp7a	70	45.854	ENSPPAG00000029825	-	82	46.602	Pan_paniscus
ENSAMXG00000007921	rrp7a	74	46.364	ENSPPAG00000021416	-	77	46.789	Pan_paniscus
ENSAMXG00000007921	rrp7a	94	46.931	ENSPPRG00000022185	RRP7A	97	46.931	Panthera_pardus
ENSAMXG00000007921	rrp7a	90	36.296	ENSPTIG00000020965	RRP7A	92	36.531	Panthera_tigris_altaica
ENSAMXG00000007921	rrp7a	90	43.494	ENSPANG00000032001	-	93	44.195	Papio_anubis
ENSAMXG00000007921	rrp7a	90	46.840	ENSPANG00000025354	-	93	47.191	Papio_anubis
ENSAMXG00000007921	rrp7a	96	62.898	ENSPKIG00000007209	rrp7a	86	63.958	Paramormyrops_kingsleyae
ENSAMXG00000007921	rrp7a	88	48.462	ENSPSIG00000007988	RRP7A	97	49.237	Pelodiscus_sinensis
ENSAMXG00000007921	rrp7a	89	54.023	ENSPMGG00000009485	rrp7a	100	52.982	Periophthalmus_magnuspinnatus
ENSAMXG00000007921	rrp7a	95	45.907	ENSPEMG00000022265	Rrp7a	98	45.907	Peromyscus_maniculatus_bairdii
ENSAMXG00000007921	rrp7a	93	44.689	ENSPMAG00000002823	rrp7a	96	44.689	Petromyzon_marinus
ENSAMXG00000007921	rrp7a	90	48.327	ENSPCIG00000026195	RRP7A	93	48.327	Phascolarctos_cinereus
ENSAMXG00000007921	rrp7a	96	66.667	ENSPFOG00000001042	rrp7a	100	66.667	Poecilia_formosa
ENSAMXG00000007921	rrp7a	59	70.349	ENSPLAG00000010787	-	72	70.349	Poecilia_latipinna
ENSAMXG00000007921	rrp7a	59	70.349	ENSPLAG00000009537	rrp7a	72	70.349	Poecilia_latipinna
ENSAMXG00000007921	rrp7a	96	67.021	ENSPMEG00000018204	rrp7a	100	67.021	Poecilia_mexicana
ENSAMXG00000007921	rrp7a	96	64.539	ENSPREG00000016492	rrp7a	100	64.539	Poecilia_reticulata
ENSAMXG00000007921	rrp7a	90	47.584	ENSPPYG00000011897	RRP7A	93	48.148	Pongo_abelii
ENSAMXG00000007921	rrp7a	90	46.840	ENSPCOG00000014018	RRP7A	93	47.407	Propithecus_coquereli
ENSAMXG00000007921	rrp7a	81	41.909	ENSPVAG00000003330	RRP7A	92	42.562	Pteropus_vampyrus
ENSAMXG00000007921	rrp7a	96	68.794	ENSPNYG00000020343	rrp7a	100	68.794	Pundamilia_nyererei
ENSAMXG00000007921	rrp7a	96	80.427	ENSPNAG00000014376	rrp7a	100	80.427	Pygocentrus_nattereri
ENSAMXG00000007921	rrp7a	92	45.255	ENSRNOG00000022896	Rrp7a	95	45.255	Rattus_norvegicus
ENSAMXG00000007921	rrp7a	90	45.185	ENSRBIG00000040358	RRP7A	93	45.185	Rhinopithecus_bieti
ENSAMXG00000007921	rrp7a	90	46.816	ENSRROG00000036754	RRP7A	93	47.388	Rhinopithecus_roxellana
ENSAMXG00000007921	rrp7a	90	46.617	ENSSBOG00000009234	RRP7A	93	47.191	Saimiri_boliviensis_boliviensis
ENSAMXG00000007921	rrp7a	71	51.442	ENSSHAG00000005715	RRP7A	97	51.442	Sarcophilus_harrisii
ENSAMXG00000007921	rrp7a	99	65.172	ENSSFOG00015012621	rrp7a	92	63.448	Scleropages_formosus
ENSAMXG00000007921	rrp7a	96	64.184	ENSSMAG00000004593	rrp7a	100	64.184	Scophthalmus_maximus
ENSAMXG00000007921	rrp7a	96	67.730	ENSSDUG00000016921	rrp7a	100	67.730	Seriola_dumerili
ENSAMXG00000007921	rrp7a	96	68.085	ENSSLDG00000024758	rrp7a	100	68.085	Seriola_lalandi_dorsalis
ENSAMXG00000007921	rrp7a	58	73.810	ENSSARG00000002133	-	66	73.810	Sorex_araneus
ENSAMXG00000007921	rrp7a	86	42.292	ENSSPUG00000005373	RRP7A	99	43.083	Sphenodon_punctatus
ENSAMXG00000007921	rrp7a	96	67.376	ENSSPAG00000016048	rrp7a	100	67.376	Stegastes_partitus
ENSAMXG00000007921	rrp7a	90	47.368	ENSSSCG00000033983	RRP7A	93	47.368	Sus_scrofa
ENSAMXG00000007921	rrp7a	88	48.462	ENSTGUG00000009647	RRP7A	100	48.462	Taeniopygia_guttata
ENSAMXG00000007921	rrp7a	96	66.312	ENSTRUG00000024726	rrp7a	100	66.312	Takifugu_rubripes
ENSAMXG00000007921	rrp7a	96	65.018	ENSTNIG00000010842	rrp7a	100	65.018	Tetraodon_nigroviridis
ENSAMXG00000007921	rrp7a	90	49.071	ENSUAMG00000026180	RRP7A	97	47.500	Ursus_americanus
ENSAMXG00000007921	rrp7a	90	47.212	ENSUMAG00000020394	RRP7A	97	45.714	Ursus_maritimus
ENSAMXG00000007921	rrp7a	89	47.348	ENSVVUG00000002248	-	65	47.348	Vulpes_vulpes
ENSAMXG00000007921	rrp7a	95	44.755	ENSXETG00000013414	rrp7a	99	45.196	Xenopus_tropicalis
ENSAMXG00000007921	rrp7a	96	64.311	ENSXCOG00000015955	rrp7a	100	64.311	Xiphophorus_couchianus
ENSAMXG00000007921	rrp7a	96	64.184	ENSXMAG00000006165	rrp7a	100	64.184	Xiphophorus_maculatus