EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000007935 (Gene tree)
Gene ID: 103032019
Gene Symbol: celf4
Alias: zgc:92761
Full Name: CUGBP Elav-like family member 4
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 147118 bases
Position: chr14:33151992-33299109
Accession: 103032019
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000008169	RRM_1	PF00076.22	6.2e-52	1	3
ENSAMXP00000008169	RRM_1	PF00076.22	6.2e-52	2	3
ENSAMXP00000008169	RRM_1	PF00076.22	6.2e-52	3	3
ENSAMXP00000043049	RRM_1	PF00076.22	2.3e-43	1	3
ENSAMXP00000043049	RRM_1	PF00076.22	2.3e-43	2	3
ENSAMXP00000043049	RRM_1	PF00076.22	2.3e-43	3	3
ENSAMXP00000041133	RRM_1	PF00076.22	5.3e-41	1	3
ENSAMXP00000041133	RRM_1	PF00076.22	5.3e-41	2	3
ENSAMXP00000041133	RRM_1	PF00076.22	5.3e-41	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000042872	-	5189	XM_022676518	ENSAMXP00000043049	482 (aa)	XP_022532239	UPI000BBD6E2F
ENSAMXT00000008169	-	1542	XM_007246010	ENSAMXP00000008169	513 (aa)	XP_007246072	W5KKQ7
ENSAMXT00000034120	-	1296	-	ENSAMXP00000041133	431 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000007935's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000007935's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000007935	celf4	50	46.914	ENSAMXG00000031223	elavl1a	89	46.914
ENSAMXG00000007935	celf4	53	40.741	ENSAMXG00000000687	elavl4	81	40.741
ENSAMXG00000007935	celf4	64	33.333	ENSAMXG00000024719	rbms2a	52	33.333
ENSAMXG00000007935	celf4	54	33.750	ENSAMXG00000017399	rbms2b	50	33.750
ENSAMXG00000007935	celf4	63	38.961	ENSAMXG00000002146	rbms1a	65	38.961
ENSAMXG00000007935	celf4	94	68.421	ENSAMXG00000012028	celf5b	67	90.476
ENSAMXG00000007935	celf4	99	44.505	ENSAMXG00000005933	celf2	81	80.952
ENSAMXG00000007935	celf4	92	62.619	ENSAMXG00000009926	celf3a	100	62.440
ENSAMXG00000007935	celf4	56	36.250	ENSAMXG00000043770	-	83	38.776
ENSAMXG00000007935	celf4	57	41.860	ENSAMXG00000040498	elavl3	82	41.860
ENSAMXG00000007935	celf4	92	71.461	ENSAMXG00000033823	si:dkey-205h23.2	66	95.238
ENSAMXG00000007935	celf4	53	37.349	ENSAMXG00000018395	-	51	37.349
ENSAMXG00000007935	celf4	92	63.855	ENSAMXG00000012489	celf3b	100	62.228
ENSAMXG00000007935	celf4	68	38.776	ENSAMXG00000020388	rbms3	78	38.776
ENSAMXG00000007935	celf4	50	41.975	ENSAMXG00000036990	ELAVL2	66	41.975
ENSAMXG00000007935	celf4	57	31.818	ENSAMXG00000037884	tia1l	56	34.177
ENSAMXG00000007935	celf4	93	45.951	ENSAMXG00000020576	celf1	61	80.952

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000007935	celf4	100	85.366	ENSG00000101489	CELF4	100	92.537	Homo_sapiens
ENSAMXG00000007935	celf4	100	94.095	ENSAPOG00000002964	celf4	100	94.095	Acanthochromis_polyacanthus
ENSAMXG00000007935	celf4	94	75.776	ENSAMEG00000017059	CELF4	99	76.398	Ailuropoda_melanoleuca
ENSAMXG00000007935	celf4	99	89.773	ENSACIG00000018097	celf4	100	89.773	Amphilophus_citrinellus
ENSAMXG00000007935	celf4	100	94.095	ENSAOCG00000020590	celf4	100	94.095	Amphiprion_ocellaris
ENSAMXG00000007935	celf4	59	70.722	ENSAOCG00000019919	-	78	70.703	Amphiprion_ocellaris
ENSAMXG00000007935	celf4	99	92.325	ENSAPEG00000002940	celf4	99	92.325	Amphiprion_percula
ENSAMXG00000007935	celf4	99	92.744	ENSATEG00000023731	celf4	100	92.744	Anabas_testudineus
ENSAMXG00000007935	celf4	75	69.816	ENSAPLG00000007830	-	100	73.475	Anas_platyrhynchos
ENSAMXG00000007935	celf4	53	77.818	ENSACAG00000012428	CELF4	92	77.695	Anolis_carolinensis
ENSAMXG00000007935	celf4	100	85.366	ENSANAG00000029499	CELF4	100	86.031	Aotus_nancymaae
ENSAMXG00000007935	celf4	100	93.905	ENSACLG00000011828	celf4	100	93.905	Astatotilapia_calliptera
ENSAMXG00000007935	celf4	100	85.556	ENSBTAG00000004940	CELF4	98	92.683	Bos_taurus
ENSAMXG00000007935	celf4	100	83.478	ENSCJAG00000021135	CELF4	100	84.130	Callithrix_jacchus
ENSAMXG00000007935	celf4	100	80.544	ENSCHIG00000007169	CELF4	98	92.683	Capra_hircus
ENSAMXG00000007935	celf4	92	75.297	ENSTSYG00000000816	CELF4	84	89.877	Carlito_syrichta
ENSAMXG00000007935	celf4	100	74.259	ENSCPOG00000035956	CELF4	99	75.556	Cavia_porcellus
ENSAMXG00000007935	celf4	100	85.366	ENSCCAG00000028373	CELF4	100	86.031	Cebus_capucinus
ENSAMXG00000007935	celf4	100	85.366	ENSCATG00000045293	CELF4	100	86.031	Cercocebus_atys
ENSAMXG00000007935	celf4	100	78.519	ENSCLAG00000008344	CELF4	99	79.259	Chinchilla_lanigera
ENSAMXG00000007935	celf4	92	80.916	ENSCSAG00000017933	CELF4	100	82.697	Chlorocebus_sabaeus
ENSAMXG00000007935	celf4	92	76.904	ENSCPBG00000005237	CELF4	93	82.440	Chrysemys_picta_bellii
ENSAMXG00000007935	celf4	100	85.366	ENSCANG00000036735	CELF4	100	86.031	Colobus_angolensis_palliatus
ENSAMXG00000007935	celf4	80	71.942	ENSCGRG00001018085	Celf4	89	73.913	Cricetulus_griseus_chok1gshd
ENSAMXG00000007935	celf4	100	93.714	ENSCSEG00000007074	celf4	99	100.000	Cynoglossus_semilaevis
ENSAMXG00000007935	celf4	100	91.051	ENSCVAG00000017617	celf4	100	91.723	Cyprinodon_variegatus
ENSAMXG00000007935	celf4	100	96.161	ENSDARG00000070045	celf4	100	98.765	Danio_rerio
ENSAMXG00000007935	celf4	92	78.025	ENSDNOG00000032492	CELF4	99	80.247	Dasypus_novemcinctus
ENSAMXG00000007935	celf4	100	78.519	ENSDORG00000007169	Celf4	99	79.259	Dipodomys_ordii
ENSAMXG00000007935	celf4	92	78.014	ENSETEG00000007432	-	72	78.014	Echinops_telfairi
ENSAMXG00000007935	celf4	100	85.366	ENSEASG00005016534	CELF4	100	86.031	Equus_asinus_asinus
ENSAMXG00000007935	celf4	100	78.689	ENSECAG00000008810	CELF4	100	79.303	Equus_caballus
ENSAMXG00000007935	celf4	91	61.623	ENSEEUG00000003763	CELF4	94	64.912	Erinaceus_europaeus
ENSAMXG00000007935	celf4	100	85.556	ENSFCAG00000045234	CELF4	100	86.222	Felis_catus
ENSAMXG00000007935	celf4	92	81.934	ENSFALG00000009188	CELF4	98	82.952	Ficedula_albicollis
ENSAMXG00000007935	celf4	100	73.704	ENSFDAG00000010287	CELF4	99	75.000	Fukomys_damarensis
ENSAMXG00000007935	celf4	100	73.913	ENSFHEG00000003431	celf4	99	77.707	Fundulus_heteroclitus
ENSAMXG00000007935	celf4	100	76.091	ENSGMOG00000008703	celf4	100	76.091	Gadus_morhua
ENSAMXG00000007935	celf4	87	92.683	ENSGMOG00000011747	-	74	92.683	Gadus_morhua
ENSAMXG00000007935	celf4	100	93.714	ENSGAFG00000021515	celf4	94	96.128	Gambusia_affinis
ENSAMXG00000007935	celf4	100	86.742	ENSGACG00000008752	celf4	100	86.742	Gasterosteus_aculeatus
ENSAMXG00000007935	celf4	61	80.887	ENSGAGG00000023014	-	98	81.570	Gopherus_agassizii
ENSAMXG00000007935	celf4	73	86.111	ENSGAGG00000017672	-	88	90.217	Gopherus_agassizii
ENSAMXG00000007935	celf4	100	85.366	ENSGGOG00000013920	CELF4	100	86.031	Gorilla_gorilla
ENSAMXG00000007935	celf4	100	93.714	ENSHBUG00000021618	celf4	100	93.524	Haplochromis_burtoni
ENSAMXG00000007935	celf4	100	79.055	ENSHGLG00000003130	CELF4	100	79.261	Heterocephalus_glaber_female
ENSAMXG00000007935	celf4	100	77.963	ENSHGLG00100006394	CELF4	99	78.704	Heterocephalus_glaber_male
ENSAMXG00000007935	celf4	100	93.364	ENSHCOG00000012195	celf4	100	92.677	Hippocampus_comes
ENSAMXG00000007935	celf4	100	87.115	ENSIPUG00000010810	celf4	95	87.089	Ictalurus_punctatus
ENSAMXG00000007935	celf4	100	77.778	ENSJJAG00000016892	Celf4	99	78.519	Jaculus_jaculus
ENSAMXG00000007935	celf4	100	93.524	ENSKMAG00000019602	celf4	100	93.714	Kryptolebias_marmoratus
ENSAMXG00000007935	celf4	100	92.377	ENSLBEG00000000940	celf4	100	92.377	Labrus_bergylta
ENSAMXG00000007935	celf4	96	83.127	ENSLOCG00000004792	celf4	98	83.127	Lepisosteus_oculatus
ENSAMXG00000007935	celf4	100	78.519	ENSLAFG00000021352	CELF4	99	79.815	Loxodonta_africana
ENSAMXG00000007935	celf4	100	85.366	ENSMFAG00000042983	CELF4	100	86.031	Macaca_fascicularis
ENSAMXG00000007935	celf4	100	79.055	ENSMMUG00000006866	CELF4	100	79.466	Macaca_mulatta
ENSAMXG00000007935	celf4	100	85.366	ENSMNEG00000033449	CELF4	100	86.031	Macaca_nemestrina
ENSAMXG00000007935	celf4	98	74.898	ENSMLEG00000028543	CELF4	99	75.102	Mandrillus_leucophaeus
ENSAMXG00000007935	celf4	100	92.135	ENSMAMG00000018573	celf4	99	92.135	Mastacembelus_armatus
ENSAMXG00000007935	celf4	100	90.068	ENSMZEG00005026879	celf4	100	90.068	Maylandia_zebra
ENSAMXG00000007935	celf4	72	63.068	ENSMGAG00000017029	CELF4	100	62.857	Meleagris_gallopavo
ENSAMXG00000007935	celf4	100	83.261	ENSMICG00000006984	CELF4	100	83.913	Microcebus_murinus
ENSAMXG00000007935	celf4	100	78.148	ENSMOCG00000011985	Celf4	99	79.444	Microtus_ochrogaster
ENSAMXG00000007935	celf4	99	92.290	ENSMMOG00000012281	celf4	100	92.290	Mola_mola
ENSAMXG00000007935	celf4	85	72.063	ENSMODG00000000306	CELF4	91	72.324	Monodelphis_domestica
ENSAMXG00000007935	celf4	100	94.095	ENSMALG00000001696	celf4	100	94.095	Monopterus_albus
ENSAMXG00000007935	celf4	100	79.055	MGP_CAROLIEiJ_G0022058	Celf4	100	81.838	Mus_caroli
ENSAMXG00000007935	celf4	100	83.442	ENSMUSG00000024268	Celf4	100	83.660	Mus_musculus
ENSAMXG00000007935	celf4	100	79.055	MGP_PahariEiJ_G0018792	Celf4	100	81.838	Mus_pahari
ENSAMXG00000007935	celf4	100	79.055	MGP_SPRETEiJ_G0022969	Celf4	100	81.798	Mus_spretus
ENSAMXG00000007935	celf4	92	71.564	ENSMPUG00000001027	CELF4	81	92.857	Mustela_putorius_furo
ENSAMXG00000007935	celf4	92	78.293	ENSMLUG00000001755	CELF4	100	80.488	Myotis_lucifugus
ENSAMXG00000007935	celf4	100	78.519	ENSNGAG00000000761	Celf4	99	79.259	Nannospalax_galili
ENSAMXG00000007935	celf4	100	90.068	ENSNBRG00000018194	celf4	100	90.068	Neolamprologus_brichardi
ENSAMXG00000007935	celf4	85	71.762	ENSMEUG00000007202	-	100	72.280	Notamacropus_eugenii
ENSAMXG00000007935	celf4	88	79.874	ENSOPRG00000014415	CELF4	89	80.573	Ochotona_princeps
ENSAMXG00000007935	celf4	100	78.519	ENSODEG00000018464	CELF4	99	79.259	Octodon_degus
ENSAMXG00000007935	celf4	100	93.905	ENSONIG00000019463	celf4	100	93.714	Oreochromis_niloticus
ENSAMXG00000007935	celf4	90	84.841	ENSOCUG00000024790	CELF4	76	85.575	Oryctolagus_cuniculus
ENSAMXG00000007935	celf4	100	94.095	ENSORLG00000008913	celf4	100	93.905	Oryzias_latipes
ENSAMXG00000007935	celf4	100	94.095	ENSORLG00020008454	celf4	100	93.905	Oryzias_latipes_hni
ENSAMXG00000007935	celf4	100	94.095	ENSORLG00015004115	celf4	100	93.905	Oryzias_latipes_hsok
ENSAMXG00000007935	celf4	100	94.286	ENSOMEG00000002391	celf4	100	94.286	Oryzias_melastigma
ENSAMXG00000007935	celf4	92	81.412	ENSOGAG00000010018	CELF4	100	83.059	Otolemur_garnettii
ENSAMXG00000007935	celf4	67	76.923	ENSOARG00000005276	CELF4	100	79.487	Ovis_aries
ENSAMXG00000007935	celf4	98	78.163	ENSPPAG00000020644	CELF4	99	78.367	Pan_paniscus
ENSAMXG00000007935	celf4	100	85.366	ENSPPRG00000007683	CELF4	100	86.031	Panthera_pardus
ENSAMXG00000007935	celf4	100	85.366	ENSPTRG00000009982	CELF4	100	86.031	Pan_troglodytes
ENSAMXG00000007935	celf4	100	85.366	ENSPANG00000006365	CELF4	100	86.031	Papio_anubis
ENSAMXG00000007935	celf4	100	90.787	ENSPKIG00000017421	celf4	100	90.112	Paramormyrops_kingsleyae
ENSAMXG00000007935	celf4	92	81.934	ENSPSIG00000015538	CELF4	98	82.952	Pelodiscus_sinensis
ENSAMXG00000007935	celf4	100	78.333	ENSPEMG00000019299	Celf4	99	79.074	Peromyscus_maniculatus_bairdii
ENSAMXG00000007935	celf4	79	88.611	ENSPLAG00000012151	celf4	89	88.333	Poecilia_latipinna
ENSAMXG00000007935	celf4	99	81.532	ENSPMEG00000015313	celf4	97	100.000	Poecilia_mexicana
ENSAMXG00000007935	celf4	100	93.905	ENSPREG00000021231	celf4	100	93.905	Poecilia_reticulata
ENSAMXG00000007935	celf4	83	86.000	ENSPCAG00000000126	CELF4	75	87.500	Procavia_capensis
ENSAMXG00000007935	celf4	100	78.732	ENSPVAG00000009204	CELF4	100	79.346	Pteropus_vampyrus
ENSAMXG00000007935	celf4	100	90.068	ENSPNYG00000004131	celf4	100	90.068	Pundamilia_nyererei
ENSAMXG00000007935	celf4	100	99.220	ENSPNAG00000006426	celf4	100	99.220	Pygocentrus_nattereri
ENSAMXG00000007935	celf4	89	74.419	ENSRNOG00000014503	Celf4	100	80.606	Rattus_norvegicus
ENSAMXG00000007935	celf4	100	85.556	ENSRBIG00000035924	CELF4	100	86.222	Rhinopithecus_bieti
ENSAMXG00000007935	celf4	100	85.366	ENSRROG00000014839	CELF4	100	86.031	Rhinopithecus_roxellana
ENSAMXG00000007935	celf4	100	84.479	ENSSBOG00000030001	CELF4	100	85.144	Saimiri_boliviensis_boliviensis
ENSAMXG00000007935	celf4	91	78.552	ENSSHAG00000009193	CELF4	96	77.562	Sarcophilus_harrisii
ENSAMXG00000007935	celf4	100	85.843	ENSSFOG00015010874	celf4	100	86.067	Scleropages_formosus
ENSAMXG00000007935	celf4	100	92.164	ENSSMAG00000009331	celf4	99	100.000	Scophthalmus_maximus
ENSAMXG00000007935	celf4	99	75.693	ENSSLDG00000018548	celf4	100	75.693	Seriola_lalandi_dorsalis
ENSAMXG00000007935	celf4	99	78.465	ENSSPAG00000018307	celf4	100	78.465	Stegastes_partitus
ENSAMXG00000007935	celf4	100	83.514	ENSSSCG00000003748	CELF4	99	92.857	Sus_scrofa
ENSAMXG00000007935	celf4	92	81.934	ENSTGUG00000001649	CELF4	98	82.952	Taeniopygia_guttata
ENSAMXG00000007935	celf4	99	89.116	ENSTRUG00000015481	celf4	100	90.023	Takifugu_rubripes
ENSAMXG00000007935	celf4	96	82.430	ENSTNIG00000010679	celf4	99	77.980	Tetraodon_nigroviridis
ENSAMXG00000007935	celf4	77	86.207	ENSTBEG00000010647	CELF4	87	86.207	Tupaia_belangeri
ENSAMXG00000007935	celf4	100	78.528	ENSTTRG00000016826	CELF4	100	79.141	Tursiops_truncatus
ENSAMXG00000007935	celf4	90	78.628	ENSUAMG00000005506	CELF4	83	79.420	Ursus_americanus
ENSAMXG00000007935	celf4	56	88.000	ENSVPAG00000009042	-	70	88.000	Vicugna_pacos
ENSAMXG00000007935	celf4	100	80.544	ENSVVUG00000027721	CELF4	100	81.172	Vulpes_vulpes
ENSAMXG00000007935	celf4	96	79.310	ENSXETG00000020486	celf4	99	80.296	Xenopus_tropicalis
ENSAMXG00000007935	celf4	92	82.916	ENSXCOG00000017592	celf4	97	77.273	Xiphophorus_couchianus
ENSAMXG00000007935	celf4	100	94.073	ENSXMAG00000018178	celf4	100	94.073	Xiphophorus_maculatus