EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000008146 (Gene tree)
Gene ID: 103023872
Gene Symbol: rbm5
Alias: wu:fc25a08|wu:fe06f12
Full Name: RNA-binding protein 5
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 18395 bases
Position: chr13:22453140-22471534
Accession: 103023872
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000008375	zf-RanBP	PF00641.18	1.6e-10	1	1
ENSAMXP00000008375	G-patch	PF01585.23	7.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000008375	-	4332	XM_022675541	ENSAMXP00000008375	707 (aa)	XP_022531262	W5KLB3

Gene Model

Click here to download ENSAMXG00000008146's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000008146's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000008146	rbm5	99	64.227	ENSG00000003756	RBM5	84	63.686	Homo_sapiens
ENSAMXG00000008146	rbm5	100	68.846	ENSAPOG00000006011	-	85	68.707	Acanthochromis_polyacanthus
ENSAMXG00000008146	rbm5	100	76.860	ENSAPOG00000016625	rbm5	85	76.722	Acanthochromis_polyacanthus
ENSAMXG00000008146	rbm5	99	64.088	ENSAMEG00000012005	RBM5	84	63.549	Ailuropoda_melanoleuca
ENSAMXG00000008146	rbm5	77	81.892	ENSACIG00000007571	rbm5	99	82.114	Amphilophus_citrinellus
ENSAMXG00000008146	rbm5	100	63.049	ENSACIG00000021310	-	85	62.775	Amphilophus_citrinellus
ENSAMXG00000008146	rbm5	100	76.543	ENSAOCG00000002880	rbm5	85	76.648	Amphiprion_ocellaris
ENSAMXG00000008146	rbm5	100	64.167	ENSAOCG00000017312	-	85	63.384	Amphiprion_ocellaris
ENSAMXG00000008146	rbm5	100	69.124	ENSAPEG00000018222	RBM5	85	68.985	Amphiprion_percula
ENSAMXG00000008146	rbm5	100	74.623	ENSAPEG00000011862	rbm5	86	74.863	Amphiprion_percula
ENSAMXG00000008146	rbm5	100	76.276	ENSATEG00000024663	rbm5	85	75.691	Anabas_testudineus
ENSAMXG00000008146	rbm5	100	70.604	ENSATEG00000003838	-	86	70.782	Anabas_testudineus
ENSAMXG00000008146	rbm5	99	64.435	ENSAPLG00000011176	RBM5	90	65.181	Anas_platyrhynchos
ENSAMXG00000008146	rbm5	99	63.217	ENSACAG00000008580	RBM5	83	63.776	Anolis_carolinensis
ENSAMXG00000008146	rbm5	99	63.499	ENSANAG00000025199	RBM5	85	63.029	Aotus_nancymaae
ENSAMXG00000008146	rbm5	87	80.488	ENSACLG00000024198	RBM5	81	80.952	Astatotilapia_calliptera
ENSAMXG00000008146	rbm5	100	77.210	ENSACLG00000012748	rbm5	84	77.210	Astatotilapia_calliptera
ENSAMXG00000008146	rbm5	99	63.950	ENSBTAG00000006330	RBM5	84	63.549	Bos_taurus
ENSAMXG00000008146	rbm5	97	70.513	ENSCJAG00000004740	RBM5	84	63.686	Callithrix_jacchus
ENSAMXG00000008146	rbm5	99	64.227	ENSCAFG00000010866	RBM5	84	63.686	Canis_familiaris
ENSAMXG00000008146	rbm5	99	64.227	ENSCAFG00020022126	RBM5	84	63.686	Canis_lupus_dingo
ENSAMXG00000008146	rbm5	99	64.088	ENSCHIG00000018435	RBM5	84	63.549	Capra_hircus
ENSAMXG00000008146	rbm5	83	61.488	ENSTSYG00000004158	RBM5	80	60.877	Carlito_syrichta
ENSAMXG00000008146	rbm5	99	52.817	ENSCAPG00000013495	RBM5	83	52.883	Cavia_aperea
ENSAMXG00000008146	rbm5	99	63.800	ENSCPOG00000008151	RBM5	84	63.549	Cavia_porcellus
ENSAMXG00000008146	rbm5	99	63.499	ENSCCAG00000026401	RBM5	85	63.029	Cebus_capucinus
ENSAMXG00000008146	rbm5	99	64.227	ENSCATG00000041038	RBM5	84	63.686	Cercocebus_atys
ENSAMXG00000008146	rbm5	99	63.939	ENSCLAG00000007873	RBM5	85	63.549	Chinchilla_lanigera
ENSAMXG00000008146	rbm5	99	64.227	ENSCSAG00000014401	RBM5	84	63.686	Chlorocebus_sabaeus
ENSAMXG00000008146	rbm5	94	56.662	ENSCHOG00000009429	RBM5	84	54.942	Choloepus_hoffmanni
ENSAMXG00000008146	rbm5	99	63.839	ENSCPBG00000002406	RBM5	83	64.216	Chrysemys_picta_bellii
ENSAMXG00000008146	rbm5	99	63.122	ENSCANG00000031250	RBM5	84	62.586	Colobus_angolensis_palliatus
ENSAMXG00000008146	rbm5	99	63.788	ENSCGRG00001010543	Rbm5	85	64.117	Cricetulus_griseus_chok1gshd
ENSAMXG00000008146	rbm5	99	63.788	ENSCGRG00000008475	Rbm5	85	64.117	Cricetulus_griseus_crigri
ENSAMXG00000008146	rbm5	98	72.790	ENSCSEG00000000596	rbm5	82	73.444	Cynoglossus_semilaevis
ENSAMXG00000008146	rbm5	100	74.656	ENSCVAG00000005655	rbm5	85	74.793	Cyprinodon_variegatus
ENSAMXG00000008146	rbm5	100	70.099	ENSDARG00000098280	rbm5	83	69.817	Danio_rerio
ENSAMXG00000008146	rbm5	99	64.641	ENSDNOG00000011756	RBM5	84	63.961	Dasypus_novemcinctus
ENSAMXG00000008146	rbm5	99	63.361	ENSDORG00000007692	Rbm5	84	63.686	Dipodomys_ordii
ENSAMXG00000008146	rbm5	99	60.414	ENSETEG00000012773	RBM5	84	60.357	Echinops_telfairi
ENSAMXG00000008146	rbm5	79	64.658	ENSEBUG00000017034	rbm5	72	64.110	Eptatretus_burgeri
ENSAMXG00000008146	rbm5	99	64.227	ENSEASG00005011835	RBM5	84	63.686	Equus_asinus_asinus
ENSAMXG00000008146	rbm5	99	64.227	ENSECAG00000020447	RBM5	84	63.686	Equus_caballus
ENSAMXG00000008146	rbm5	86	73.399	ENSEEUG00000005943	RBM5	73	73.399	Erinaceus_europaeus
ENSAMXG00000008146	rbm5	100	76.054	ENSELUG00000022467	rbm5	84	74.422	Esox_lucius
ENSAMXG00000008146	rbm5	99	63.674	ENSFCAG00000014639	RBM5	84	63.549	Felis_catus
ENSAMXG00000008146	rbm5	99	64.435	ENSFALG00000008828	RBM5	76	64.903	Ficedula_albicollis
ENSAMXG00000008146	rbm5	99	64.056	ENSFDAG00000001897	RBM5	84	63.209	Fukomys_damarensis
ENSAMXG00000008146	rbm5	90	92.857	ENSFHEG00000015954	rbm5	81	92.857	Fundulus_heteroclitus
ENSAMXG00000008146	rbm5	100	69.425	ENSGMOG00000016224	rbm5	83	71.108	Gadus_morhua
ENSAMXG00000008146	rbm5	100	49.441	ENSGMOG00000007810	-	80	64.072	Gadus_morhua
ENSAMXG00000008146	rbm5	99	64.485	ENSGALG00000039288	RBM5	75	65.181	Gallus_gallus
ENSAMXG00000008146	rbm5	100	74.795	ENSGAFG00000010690	rbm5	85	74.932	Gambusia_affinis
ENSAMXG00000008146	rbm5	100	74.198	ENSGACG00000010469	rbm5	84	74.198	Gasterosteus_aculeatus
ENSAMXG00000008146	rbm5	100	65.651	ENSGACG00000000858	-	99	62.818	Gasterosteus_aculeatus
ENSAMXG00000008146	rbm5	94	62.849	ENSGAGG00000007935	RBM5	82	63.250	Gopherus_agassizii
ENSAMXG00000008146	rbm5	99	64.227	ENSGGOG00000014490	RBM5	84	63.686	Gorilla_gorilla
ENSAMXG00000008146	rbm5	100	76.438	ENSHBUG00000001941	rbm5	85	76.438	Haplochromis_burtoni
ENSAMXG00000008146	rbm5	86	80.488	ENSHBUG00000011901	-	80	80.952	Haplochromis_burtoni
ENSAMXG00000008146	rbm5	99	63.850	ENSHGLG00000014844	RBM5	85	63.462	Heterocephalus_glaber_female
ENSAMXG00000008146	rbm5	99	63.939	ENSHGLG00100010739	RBM5	85	63.549	Heterocephalus_glaber_male
ENSAMXG00000008146	rbm5	100	57.199	ENSHCOG00000004536	-	85	57.461	Hippocampus_comes
ENSAMXG00000008146	rbm5	95	73.746	ENSHCOG00000017110	rbm5	83	74.189	Hippocampus_comes
ENSAMXG00000008146	rbm5	100	87.571	ENSIPUG00000000640	rbm5	84	87.571	Ictalurus_punctatus
ENSAMXG00000008146	rbm5	99	64.088	ENSSTOG00000013856	RBM5	85	63.686	Ictidomys_tridecemlineatus
ENSAMXG00000008146	rbm5	99	63.950	ENSJJAG00000008844	Rbm5	84	63.961	Jaculus_jaculus
ENSAMXG00000008146	rbm5	100	75.138	ENSKMAG00000006663	rbm5	85	75.829	Kryptolebias_marmoratus
ENSAMXG00000008146	rbm5	100	74.486	ENSLBEG00000020858	rbm5	90	74.216	Labrus_bergylta
ENSAMXG00000008146	rbm5	100	66.528	ENSLBEG00000010877	-	81	66.252	Labrus_bergylta
ENSAMXG00000008146	rbm5	67	69.103	ENSLBEG00000002522	-	84	71.071	Labrus_bergylta
ENSAMXG00000008146	rbm5	99	62.272	ENSLACG00000016572	RBM5	96	65.742	Latimeria_chalumnae
ENSAMXG00000008146	rbm5	99	72.466	ENSLOCG00000010774	rbm5	84	72.603	Lepisosteus_oculatus
ENSAMXG00000008146	rbm5	99	64.088	ENSLAFG00000006733	RBM5	84	63.824	Loxodonta_africana
ENSAMXG00000008146	rbm5	99	64.227	ENSMFAG00000031609	RBM5	84	63.686	Macaca_fascicularis
ENSAMXG00000008146	rbm5	99	64.227	ENSMMUG00000004921	RBM5	84	63.686	Macaca_mulatta
ENSAMXG00000008146	rbm5	99	64.365	ENSMNEG00000044394	RBM5	84	63.824	Macaca_nemestrina
ENSAMXG00000008146	rbm5	99	63.019	ENSMLEG00000034689	RBM5	84	63.296	Mandrillus_leucophaeus
ENSAMXG00000008146	rbm5	90	90.476	ENSMAMG00000017277	rbm5	80	90.476	Mastacembelus_armatus
ENSAMXG00000008146	rbm5	100	69.559	ENSMAMG00000023948	-	79	69.421	Mastacembelus_armatus
ENSAMXG00000008146	rbm5	100	64.560	ENSMZEG00005010035	-	85	64.738	Maylandia_zebra
ENSAMXG00000008146	rbm5	100	77.210	ENSMZEG00005015328	rbm5	84	77.210	Maylandia_zebra
ENSAMXG00000008146	rbm5	99	64.763	ENSMGAG00000003972	RBM5	91	65.460	Meleagris_gallopavo
ENSAMXG00000008146	rbm5	99	63.361	ENSMAUG00000020572	Rbm5	83	63.824	Mesocricetus_auratus
ENSAMXG00000008146	rbm5	99	63.950	ENSMICG00000016179	RBM5	84	63.686	Microcebus_murinus
ENSAMXG00000008146	rbm5	99	63.499	ENSMOCG00000017479	Rbm5	84	63.824	Microtus_ochrogaster
ENSAMXG00000008146	rbm5	88	64.033	ENSMMOG00000021804	-	84	57.203	Mola_mola
ENSAMXG00000008146	rbm5	100	63.911	ENSMMOG00000015342	rbm5	84	63.911	Mola_mola
ENSAMXG00000008146	rbm5	99	63.700	ENSMODG00000012301	RBM5	84	63.549	Monodelphis_domestica
ENSAMXG00000008146	rbm5	100	67.222	ENSMALG00000016769	-	85	66.391	Monopterus_albus
ENSAMXG00000008146	rbm5	100	67.080	ENSMALG00000000609	rbm5	83	67.218	Monopterus_albus
ENSAMXG00000008146	rbm5	99	62.204	MGP_CAROLIEiJ_G0032660	Rbm5	90	74.286	Mus_caroli
ENSAMXG00000008146	rbm5	99	62.204	ENSMUSG00000032580	Rbm5	90	74.286	Mus_musculus
ENSAMXG00000008146	rbm5	99	62.343	MGP_PahariEiJ_G0015528	Rbm5	90	74.286	Mus_pahari
ENSAMXG00000008146	rbm5	99	62.343	MGP_SPRETEiJ_G0033805	Rbm5	90	74.286	Mus_spretus
ENSAMXG00000008146	rbm5	99	64.525	ENSMLUG00000007875	RBM5	84	64.256	Myotis_lucifugus
ENSAMXG00000008146	rbm5	99	63.649	ENSNGAG00000011777	Rbm5	84	63.978	Nannospalax_galili
ENSAMXG00000008146	rbm5	100	61.255	ENSNBRG00000004400	RBM5	86	61.664	Neolamprologus_brichardi
ENSAMXG00000008146	rbm5	100	76.575	ENSNBRG00000018097	rbm5	85	76.575	Neolamprologus_brichardi
ENSAMXG00000008146	rbm5	99	64.088	ENSNLEG00000006943	RBM5	84	63.549	Nomascus_leucogenys
ENSAMXG00000008146	rbm5	99	58.807	ENSMEUG00000012994	RBM5	85	58.971	Notamacropus_eugenii
ENSAMXG00000008146	rbm5	98	63.585	ENSOPRG00000015154	RBM5	83	63.459	Ochotona_princeps
ENSAMXG00000008146	rbm5	99	62.657	ENSODEG00000019111	-	85	61.295	Octodon_degus
ENSAMXG00000008146	rbm5	99	64.236	ENSODEG00000016254	-	84	63.411	Octodon_degus
ENSAMXG00000008146	rbm5	100	76.438	ENSONIG00000004107	rbm5	85	76.438	Oreochromis_niloticus
ENSAMXG00000008146	rbm5	100	65.797	ENSONIG00000019007	RBM5	85	65.301	Oreochromis_niloticus
ENSAMXG00000008146	rbm5	99	64.444	ENSOANG00000006557	RBM5	96	63.839	Ornithorhynchus_anatinus
ENSAMXG00000008146	rbm5	99	63.536	ENSOCUG00000011652	RBM5	84	63.411	Oryctolagus_cuniculus
ENSAMXG00000008146	rbm5	100	62.008	ENSORLG00000001053	-	86	61.005	Oryzias_latipes
ENSAMXG00000008146	rbm5	94	73.715	ENSORLG00000003369	rbm5	83	73.715	Oryzias_latipes
ENSAMXG00000008146	rbm5	100	74.619	ENSORLG00020021744	rbm5	84	74.515	Oryzias_latipes_hni
ENSAMXG00000008146	rbm5	95	61.239	ENSORLG00020006782	-	84	59.486	Oryzias_latipes_hni
ENSAMXG00000008146	rbm5	90	90.476	ENSORLG00015018379	rbm5	80	90.476	Oryzias_latipes_hsok
ENSAMXG00000008146	rbm5	95	61.383	ENSORLG00015002854	-	84	59.227	Oryzias_latipes_hsok
ENSAMXG00000008146	rbm5	79	69.652	ENSOMEG00000010653	-	90	69.652	Oryzias_melastigma
ENSAMXG00000008146	rbm5	100	74.348	ENSOMEG00000002219	rbm5	85	74.140	Oryzias_melastigma
ENSAMXG00000008146	rbm5	99	62.570	ENSOGAG00000004205	RBM5	98	56.977	Otolemur_garnettii
ENSAMXG00000008146	rbm5	99	64.088	ENSOARG00000010923	RBM5	84	63.549	Ovis_aries
ENSAMXG00000008146	rbm5	99	64.227	ENSPPAG00000043010	RBM5	84	63.686	Pan_paniscus
ENSAMXG00000008146	rbm5	99	63.674	ENSPPRG00000005404	RBM5	84	63.549	Panthera_pardus
ENSAMXG00000008146	rbm5	99	63.674	ENSPTIG00000000962	RBM5	84	63.549	Panthera_tigris_altaica
ENSAMXG00000008146	rbm5	99	64.227	ENSPTRG00000014946	RBM5	84	63.686	Pan_troglodytes
ENSAMXG00000008146	rbm5	99	64.227	ENSPANG00000018507	RBM5	84	63.686	Papio_anubis
ENSAMXG00000008146	rbm5	91	58.779	ENSPKIG00000019187	-	100	59.389	Paramormyrops_kingsleyae
ENSAMXG00000008146	rbm5	99	72.752	ENSPKIG00000024837	RBM5	85	72.480	Paramormyrops_kingsleyae
ENSAMXG00000008146	rbm5	99	63.143	ENSPSIG00000016073	RBM5	96	63.611	Pelodiscus_sinensis
ENSAMXG00000008146	rbm5	93	62.038	ENSPMGG00000017347	rbm5	100	61.834	Periophthalmus_magnuspinnatus
ENSAMXG00000008146	rbm5	86	82.051	ENSPMGG00000004719	-	83	80.952	Periophthalmus_magnuspinnatus
ENSAMXG00000008146	rbm5	99	46.164	ENSPMAG00000001998	rbm5	86	45.636	Petromyzon_marinus
ENSAMXG00000008146	rbm5	99	63.408	ENSPCIG00000021531	RBM5	84	63.700	Phascolarctos_cinereus
ENSAMXG00000008146	rbm5	100	74.760	ENSPLAG00000006318	rbm5	85	74.658	Poecilia_latipinna
ENSAMXG00000008146	rbm5	87	68.949	ENSPMEG00000008651	rbm5	99	69.268	Poecilia_mexicana
ENSAMXG00000008146	rbm5	100	74.897	ENSPMEG00000004295	rbm5	85	74.932	Poecilia_mexicana
ENSAMXG00000008146	rbm5	100	75.034	ENSPREG00000003795	rbm5	85	74.932	Poecilia_reticulata
ENSAMXG00000008146	rbm5	54	66.667	ENSPCAG00000005459	RBM5	53	61.692	Procavia_capensis
ENSAMXG00000008146	rbm5	99	63.950	ENSPCOG00000025840	RBM5	84	63.824	Propithecus_coquereli
ENSAMXG00000008146	rbm5	99	60.523	ENSPVAG00000006812	RBM5	84	60.660	Pteropus_vampyrus
ENSAMXG00000008146	rbm5	99	64.763	ENSPNYG00000006361	RBM5	99	64.903	Pundamilia_nyererei
ENSAMXG00000008146	rbm5	100	76.575	ENSPNYG00000014787	rbm5	85	76.575	Pundamilia_nyererei
ENSAMXG00000008146	rbm5	100	89.170	ENSPNAG00000012070	rbm5	84	89.170	Pygocentrus_nattereri
ENSAMXG00000008146	rbm5	99	62.483	ENSRNOG00000018153	Rbm5	84	63.824	Rattus_norvegicus
ENSAMXG00000008146	rbm5	99	64.365	ENSRBIG00000012679	RBM5	85	63.165	Rhinopithecus_bieti
ENSAMXG00000008146	rbm5	99	64.365	ENSRROG00000041331	RBM5	85	63.165	Rhinopithecus_roxellana
ENSAMXG00000008146	rbm5	99	63.499	ENSSBOG00000006324	RBM5	84	63.686	Saimiri_boliviensis_boliviensis
ENSAMXG00000008146	rbm5	99	63.687	ENSSHAG00000018260	RBM5	84	63.839	Sarcophilus_harrisii
ENSAMXG00000008146	rbm5	99	74.621	ENSSFOG00015019052	rbm5	80	75.103	Scleropages_formosus
ENSAMXG00000008146	rbm5	99	79.835	ENSSFOG00015019645	-	87	79.835	Scleropages_formosus
ENSAMXG00000008146	rbm5	100	75.382	ENSSMAG00000017106	rbm5	84	75.382	Scophthalmus_maximus
ENSAMXG00000008146	rbm5	100	76.796	ENSSDUG00000019775	rbm5	84	77.072	Seriola_dumerili
ENSAMXG00000008146	rbm5	100	76.754	ENSSLDG00000002329	rbm5	84	77.029	Seriola_lalandi_dorsalis
ENSAMXG00000008146	rbm5	100	69.410	ENSSLDG00000015996	-	86	68.707	Seriola_lalandi_dorsalis
ENSAMXG00000008146	rbm5	99	63.561	ENSSPUG00000001876	RBM5	77	63.194	Sphenodon_punctatus
ENSAMXG00000008146	rbm5	100	76.731	ENSSPAG00000019638	rbm5	85	76.454	Stegastes_partitus
ENSAMXG00000008146	rbm5	100	69.103	ENSSPAG00000020011	-	85	68.966	Stegastes_partitus
ENSAMXG00000008146	rbm5	90	76.190	ENSSSCG00000011395	RBM5	81	76.190	Sus_scrofa
ENSAMXG00000008146	rbm5	99	58.078	ENSTGUG00000006417	RBM5	89	58.159	Taeniopygia_guttata
ENSAMXG00000008146	rbm5	99	75.382	ENSTRUG00000008292	rbm5	84	75.278	Takifugu_rubripes
ENSAMXG00000008146	rbm5	99	57.806	ENSTNIG00000014742	rbm5	82	74.545	Tetraodon_nigroviridis
ENSAMXG00000008146	rbm5	99	58.462	ENSTBEG00000005424	RBM5	84	55.989	Tupaia_belangeri
ENSAMXG00000008146	rbm5	99	59.218	ENSTTRG00000007717	RBM5	84	58.322	Tursiops_truncatus
ENSAMXG00000008146	rbm5	99	64.088	ENSUAMG00000028347	RBM5	84	63.549	Ursus_americanus
ENSAMXG00000008146	rbm5	99	64.088	ENSUMAG00000022027	RBM5	84	63.549	Ursus_maritimus
ENSAMXG00000008146	rbm5	88	61.371	ENSVPAG00000009388	RBM5	83	59.535	Vicugna_pacos
ENSAMXG00000008146	rbm5	99	64.227	ENSVVUG00000028647	RBM5	84	63.686	Vulpes_vulpes
ENSAMXG00000008146	rbm5	100	75.034	ENSXMAG00000016369	rbm5	85	74.932	Xiphophorus_maculatus