EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSAMXG00000008192 (Gene tree)
Gene ID
-
Gene Symbol
lig4
Alias
zgc:165595
Full Name
DNA ligase 4
Gene Type
protein_coding
Species
Astyanax_mexicanus
Status
putative
Strand
Minus strand
Length
5595 bases
Position
chr12:17775788-17781382
Accession
103030456
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAMXP00000008413RNA_ligasePF09414.103.7e-0911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAMXT00000008413-4008XM_007228701ENSAMXP00000008413966 (aa)XP_007228763W5KLF1
Gene Model
Click here to download ENSAMXG00000008192's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000008192's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAMXG00000008192lig49464.770ENSG00000174405LIG410065.640Homo_sapiens
ENSAMXG00000008192lig49579.935ENSAPOG00000000866lig410079.935Acanthochromis_polyacanthus
ENSAMXG00000008192lig49463.388ENSAMEG00000019685LIG49963.388Ailuropoda_melanoleuca
ENSAMXG00000008192lig49580.349ENSACIG00000018309lig49980.349Amphilophus_citrinellus
ENSAMXG00000008192lig49579.826ENSAOCG00000011768lig410079.826Amphiprion_ocellaris
ENSAMXG00000008192lig49580.044ENSAPEG00000017815lig410080.044Amphiprion_percula
ENSAMXG00000008192lig49579.891ENSATEG00000005583lig49979.891Anabas_testudineus
ENSAMXG00000008192lig49166.173ENSAPLG00000001673LIG49966.173Anas_platyrhynchos
ENSAMXG00000008192lig49366.370ENSACAG00000014566LIG49966.370Anolis_carolinensis
ENSAMXG00000008192lig49464.442ENSANAG00000012446LIG49964.442Aotus_nancymaae
ENSAMXG00000008192lig49480.769ENSACLG00000027051lig49980.769Astatotilapia_calliptera
ENSAMXG00000008192lig49463.934ENSBTAG00000015868LIG49963.934Bos_taurus
ENSAMXG00000008192lig49463.786ENSCJAG00000014689LIG49963.786Callithrix_jacchus
ENSAMXG00000008192lig49364.088ENSCAFG00000006031LIG49964.088Canis_familiaris
ENSAMXG00000008192lig49364.088ENSCAFG00020021230LIG49964.088Canis_lupus_dingo
ENSAMXG00000008192lig49463.607ENSCHIG00000001019LIG49963.607Capra_hircus
ENSAMXG00000008192lig49365.265ENSCAPG00000006284LIG49965.265Cavia_aperea
ENSAMXG00000008192lig49464.661ENSCPOG00000014266LIG49964.661Cavia_porcellus
ENSAMXG00000008192lig49463.895ENSCCAG00000019971LIG49963.895Cebus_capucinus
ENSAMXG00000008192lig49364.751ENSCATG00000021075LIG49964.751Cercocebus_atys
ENSAMXG00000008192lig49365.304ENSCLAG00000003376LIG49965.304Chinchilla_lanigera
ENSAMXG00000008192lig49364.751ENSCSAG00000000211LIG49964.751Chlorocebus_sabaeus
ENSAMXG00000008192lig49368.701ENSCPBG00000023291LIG49968.018Chrysemys_picta_bellii
ENSAMXG00000008192lig46746.012ENSCING00000009536-9946.012Ciona_intestinalis
ENSAMXG00000008192lig47945.170ENSCSAVG00000010336-9945.170Ciona_savignyi
ENSAMXG00000008192lig49364.530ENSCANG00000005805LIG49964.530Colobus_angolensis_palliatus
ENSAMXG00000008192lig49464.192ENSCGRG00001012072Lig49964.192Cricetulus_griseus_chok1gshd
ENSAMXG00000008192lig49464.192ENSCGRG00000013417Lig49964.192Cricetulus_griseus_crigri
ENSAMXG00000008192lig49377.964ENSCSEG00000013905lig49677.964Cynoglossus_semilaevis
ENSAMXG00000008192lig49579.847ENSCVAG00000007896lig410079.847Cyprinodon_variegatus
ENSAMXG00000008192lig49583.315ENSDARG00000060620lig410083.315Danio_rerio
ENSAMXG00000008192lig49464.262ENSDNOG00000000513LIG49964.262Dasypus_novemcinctus
ENSAMXG00000008192lig49365.116ENSDORG00000027303Lig49965.116Dipodomys_ordii
ENSAMXG00000008192lig48430.869FBgn0030506Lig49130.869Drosophila_melanogaster
ENSAMXG00000008192lig49362.639ENSETEG00000015563LIG410063.193Echinops_telfairi
ENSAMXG00000008192lig49543.260ENSEBUG00000014243lig49943.438Eptatretus_burgeri
ENSAMXG00000008192lig49463.895ENSEASG00005022073LIG49963.895Equus_asinus_asinus
ENSAMXG00000008192lig49464.044ENSECAG00000003257LIG49964.044Equus_caballus
ENSAMXG00000008192lig49380.222ENSELUG00000006787lig49980.222Esox_lucius
ENSAMXG00000008192lig49463.337ENSFCAG00000031985LIG49963.337Felis_catus
ENSAMXG00000008192lig48069.728ENSFALG00000004214LIG49469.728Ficedula_albicollis
ENSAMXG00000008192lig49463.567ENSFDAG00000008973LIG49963.567Fukomys_damarensis
ENSAMXG00000008192lig49679.654ENSFHEG00000007398lig49179.654Fundulus_heteroclitus
ENSAMXG00000008192lig48076.546ENSGMOG00000012843lig49976.546Gadus_morhua
ENSAMXG00000008192lig49365.816ENSGALG00000016854LIG49965.816Gallus_gallus
ENSAMXG00000008192lig49580.305ENSGAFG00000019779lig49680.305Gambusia_affinis
ENSAMXG00000008192lig49477.058ENSGACG00000014135lig410077.058Gasterosteus_aculeatus
ENSAMXG00000008192lig49464.551ENSGGOG00000027771LIG49964.551Gorilla_gorilla
ENSAMXG00000008192lig49480.549ENSHBUG00000006245lig49980.549Haplochromis_burtoni
ENSAMXG00000008192lig49464.661ENSHGLG00000000718LIG49964.661Heterocephalus_glaber_female
ENSAMXG00000008192lig49464.661ENSHGLG00100003265LIG49964.661Heterocephalus_glaber_male
ENSAMXG00000008192lig49576.439ENSHCOG00000012010lig410076.439Hippocampus_comes
ENSAMXG00000008192lig49483.956ENSIPUG00000013748lig49983.956Ictalurus_punctatus
ENSAMXG00000008192lig49464.770ENSSTOG00000024303LIG49964.770Ictidomys_tridecemlineatus
ENSAMXG00000008192lig49363.646ENSJJAG00000006750Lig49963.646Jaculus_jaculus
ENSAMXG00000008192lig49578.299ENSKMAG00000001149lig410078.299Kryptolebias_marmoratus
ENSAMXG00000008192lig48579.030ENSLBEG00000014578lig49979.030Labrus_bergylta
ENSAMXG00000008192lig49367.631ENSLACG00000003282LIG49967.631Latimeria_chalumnae
ENSAMXG00000008192lig49472.210ENSLOCG00000008901lig49972.210Lepisosteus_oculatus
ENSAMXG00000008192lig49462.991ENSLAFG00000031152LIG49962.991Loxodonta_africana
ENSAMXG00000008192lig49364.751ENSMFAG00000037235LIG49964.751Macaca_fascicularis
ENSAMXG00000008192lig49364.641ENSMMUG00000008874LIG49964.641Macaca_mulatta
ENSAMXG00000008192lig49364.751ENSMNEG00000023575LIG49964.751Macaca_nemestrina
ENSAMXG00000008192lig49364.641ENSMLEG00000026720LIG49964.641Mandrillus_leucophaeus
ENSAMXG00000008192lig49580.087ENSMAMG00000008472lig49980.087Mastacembelus_armatus
ENSAMXG00000008192lig49480.769ENSMZEG00005001855lig49980.769Maylandia_zebra
ENSAMXG00000008192lig49366.038ENSMGAG00000015532LIG49966.038Meleagris_gallopavo
ENSAMXG00000008192lig49462.569ENSMOCG00000019000Lig49962.569Microtus_ochrogaster
ENSAMXG00000008192lig49577.972ENSMMOG00000004390lig410077.972Mola_mola
ENSAMXG00000008192lig49464.590ENSMODG00000025064LIG49965.022Monodelphis_domestica
ENSAMXG00000008192lig49579.303ENSMALG00000008555lig410079.303Monopterus_albus
ENSAMXG00000008192lig49463.895MGP_CAROLIEiJ_G0030809Lig49963.895Mus_caroli
ENSAMXG00000008192lig49463.567ENSMUSG00000049717Lig49963.567Mus_musculus
ENSAMXG00000008192lig49464.114MGP_PahariEiJ_G0021270Lig49964.114Mus_pahari
ENSAMXG00000008192lig49463.786MGP_SPRETEiJ_G0031917Lig49963.786Mus_spretus
ENSAMXG00000008192lig49464.004ENSMPUG00000018675LIG49964.004Mustela_putorius_furo
ENSAMXG00000008192lig49463.607ENSMLUG00000001267LIG49963.607Myotis_lucifugus
ENSAMXG00000008192lig49364.230ENSNGAG00000013258Lig49964.230Nannospalax_galili
ENSAMXG00000008192lig49580.065ENSNBRG00000021252lig49980.065Neolamprologus_brichardi
ENSAMXG00000008192lig49464.333ENSNLEG00000007888LIG49964.333Nomascus_leucogenys
ENSAMXG00000008192lig49363.867ENSOPRG00000005765LIG49963.867Ochotona_princeps
ENSAMXG00000008192lig49363.867ENSODEG00000019683LIG49963.867Octodon_degus
ENSAMXG00000008192lig49480.659ENSONIG00000011969lig49880.659Oreochromis_niloticus
ENSAMXG00000008192lig49464.114ENSOCUG00000015734LIG49964.114Oryctolagus_cuniculus
ENSAMXG00000008192lig49477.692ENSORLG00000004041lig49977.692Oryzias_latipes
ENSAMXG00000008192lig49477.802ENSORLG00020019607lig49977.802Oryzias_latipes_hni
ENSAMXG00000008192lig49477.582ENSORLG00015017754lig49977.582Oryzias_latipes_hsok
ENSAMXG00000008192lig47182.849ENSOMEG00000003459lig49982.849Oryzias_melastigma
ENSAMXG00000008192lig49464.004ENSOGAG00000032120LIG49964.004Otolemur_garnettii
ENSAMXG00000008192lig47868.127ENSOARG00000005590LIG49968.127Ovis_aries
ENSAMXG00000008192lig49464.551ENSPPAG00000032998LIG49964.551Pan_paniscus
ENSAMXG00000008192lig49463.557ENSPPRG00000017804LIG49963.557Panthera_pardus
ENSAMXG00000008192lig49463.447ENSPTIG00000010051LIG49963.447Panthera_tigris_altaica
ENSAMXG00000008192lig49464.661ENSPTRG00000006025LIG49964.661Pan_troglodytes
ENSAMXG00000008192lig49364.862ENSPANG00000007562LIG49964.862Papio_anubis
ENSAMXG00000008192lig49677.155ENSPKIG00000011645lig49977.155Paramormyrops_kingsleyae
ENSAMXG00000008192lig49467.437ENSPSIG00000001504LIG49967.437Pelodiscus_sinensis
ENSAMXG00000008192lig49375.531ENSPMGG00000013486lig410074.619Periophthalmus_magnuspinnatus
ENSAMXG00000008192lig49463.388ENSPEMG00000000076Lig49963.388Peromyscus_maniculatus_bairdii
ENSAMXG00000008192lig49464.301ENSPCIG00000021882LIG49964.301Phascolarctos_cinereus
ENSAMXG00000008192lig49581.025ENSPFOG00000000797lig410081.025Poecilia_formosa
ENSAMXG00000008192lig49580.916ENSPLAG00000001196lig410080.916Poecilia_latipinna
ENSAMXG00000008192lig49580.916ENSPMEG00000021353lig410080.916Poecilia_mexicana
ENSAMXG00000008192lig49580.480ENSPREG00000007323lig410080.480Poecilia_reticulata
ENSAMXG00000008192lig49464.114ENSPPYG00000005540LIG49964.114Pongo_abelii
ENSAMXG00000008192lig49363.867ENSPVAG00000016403LIG49963.867Pteropus_vampyrus
ENSAMXG00000008192lig49580.174ENSPNYG00000009660lig49980.174Pundamilia_nyererei
ENSAMXG00000008192lig49490.376ENSPNAG00000028069LIG49990.376Pygocentrus_nattereri
ENSAMXG00000008192lig49490.376ENSPNAG00000028056lig49990.376Pygocentrus_nattereri
ENSAMXG00000008192lig49464.114ENSRNOG00000014605Lig49964.114Rattus_norvegicus
ENSAMXG00000008192lig49363.646ENSRBIG00000039962LIG49963.646Rhinopithecus_bieti
ENSAMXG00000008192lig49364.420ENSRROG00000006040LIG49964.420Rhinopithecus_roxellana
ENSAMXG00000008192lig49463.786ENSSBOG00000019029LIG49963.786Saimiri_boliviensis_boliviensis
ENSAMXG00000008192lig49461.858ENSSHAG00000009525LIG49962.227Sarcophilus_harrisii
ENSAMXG00000008192lig49379.755ENSSFOG00015012835lig49979.755Scleropages_formosus
ENSAMXG00000008192lig49575.791ENSSMAG00000011267lig410075.791Scophthalmus_maximus
ENSAMXG00000008192lig49578.804ENSSDUG00000010343lig410078.804Seriola_dumerili
ENSAMXG00000008192lig49577.174ENSSLDG00000003239lig410077.283Seriola_lalandi_dorsalis
ENSAMXG00000008192lig49463.089ENSSARG00000006573LIG49963.089Sorex_araneus
ENSAMXG00000008192lig48768.929ENSSPUG00000002444LIG410068.929Sphenodon_punctatus
ENSAMXG00000008192lig49578.953ENSSPAG00000001609lig410078.953Stegastes_partitus
ENSAMXG00000008192lig49463.886ENSSSCG00000009540LIG49963.886Sus_scrofa
ENSAMXG00000008192lig49366.260ENSTGUG00000010795LIG49966.260Taeniopygia_guttata
ENSAMXG00000008192lig49578.190ENSTRUG00000009984lig410078.190Takifugu_rubripes
ENSAMXG00000008192lig49576.554ENSTNIG00000010348lig410076.772Tetraodon_nigroviridis
ENSAMXG00000008192lig49464.114ENSTBEG00000017741LIG49964.114Tupaia_belangeri
ENSAMXG00000008192lig49464.153ENSTTRG00000012660LIG49964.153Tursiops_truncatus
ENSAMXG00000008192lig49363.907ENSUAMG00000003773LIG49963.907Ursus_americanus
ENSAMXG00000008192lig49565.577ENSXETG00000002654lig410065.577Xenopus_tropicalis
ENSAMXG00000008192lig49580.589ENSXCOG00000017401lig410080.589Xiphophorus_couchianus
ENSAMXG00000008192lig49580.828ENSXMAG00000015142lig410080.828Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us